Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 0.0e+00 1346.6 695 100.0
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 0.0e+00 1156.0 701 87.3
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 0.0e+00 1149.0 698 87.2
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 0.0e+00 1122.8 699 85.3
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 7.6e-284 980.3 709 75.0
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 1.3e-272 943.0 707 73.7
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 9.3e-266 920.2 711 72.0
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 1.9e-255 885.9 724 68.5
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.8e-253 879.4 735 68.6
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 1.4e-250 869.8 712 68.0
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 8.2e-222 774.2 705 63.3
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 2.3e-192 676.4 491 74.9
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 1.6e-188 663.7 715 54.1
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 8.0e-185 651.4 709 54.7
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 6.8e-184 648.3 653 55.6
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 9.8e-183 644.4 709 53.2
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 6.4e-182 641.7 692 55.9
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 3.2e-181 639.4 709 54.7
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 3.2e-181 639.4 709 54.7
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 5.4e-181 638.6 749 51.3
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 3.5e-180 636.0 707 54.6
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 3.5e-180 636.0 710 54.1
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.0e-179 634.4 710 53.9
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 2.3e-179 633.3 714 54.6
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.9e-178 630.2 670 53.9
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 3.3e-178 629.4 664 54.5
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 9.5e-178 627.9 709 52.0
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.2e-177 627.5 672 55.1
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.6e-177 627.1 717 52.9
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 8.1e-177 624.8 717 52.6
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.4e-175 619.4 669 54.1
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 5.8e-175 618.6 652 54.9
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 7.5e-175 618.2 676 55.3
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 2.9e-174 616.3 647 54.7
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 4.9e-174 615.5 662 53.8
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 4.9e-174 615.5 711 52.6
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 2.4e-173 613.2 671 53.5
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 4.6e-172 609.0 654 54.1
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 1.3e-171 607.4 671 53.7
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 5.1e-171 605.5 718 51.4
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 6.6e-171 605.1 699 53.1
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 6.2e-169 598.6 689 52.7
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 6.2e-169 598.6 673 53.3
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 8.4e-166 588.2 691 53.1
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 8.4e-166 588.2 746 49.5
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 9.2e-165 584.7 681 52.7
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.1e-164 583.6 716 50.3
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 2.1e-161 573.5 683 52.4
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.7e-158 563.9 602 53.2
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 4.2e-157 559.3 643 51.2
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 2.1e-156 557.0 700 50.0
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 2.7e-156 556.6 667 49.5
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 3.6e-153 546.2 604 53.1
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 8.1e-153 545.0 724 49.0
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 1.1e-152 544.7 695 48.2
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 1.5e-151 540.8 715 48.1
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 2.0e-151 540.4 666 50.3
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 3.2e-149 533.1 529 60.9
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.1e-148 530.4 669 48.7
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.1e-148 530.4 653 48.4
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 4.6e-148 529.3 696 47.4
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.0e-147 526.6 682 47.5
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 5.1e-147 525.8 680 50.6
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 6.6e-147 525.4 677 48.0
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 3.3e-146 523.1 670 47.9
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 1.3e-145 521.2 652 49.8
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 2.1e-145 520.4 661 49.5
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 3.1e-144 516.5 775 42.8
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 2.2e-142 510.4 690 48.8
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 2.9e-142 510.0 660 49.2
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.6e-140 504.2 702 46.2
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 1.3e-139 501.1 688 46.9
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 3.0e-139 500.0 687 46.6
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 4.8e-137 492.7 634 48.3
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 8.1e-137 491.9 705 47.0
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 2.4e-136 490.3 517 55.5
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 2.6e-135 486.9 537 53.8
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 3.8e-134 483.0 535 54.0
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 4.2e-133 479.6 692 45.7
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 3.9e-131 473.0 675 45.3
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 4.3e-130 469.5 579 49.6
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 2.8e-129 466.8 587 49.1
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 3.7e-129 466.5 579 49.2
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 1.2e-127 461.5 692 43.8
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 2.1e-124 450.7 685 43.6
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.3e-123 447.2 614 46.7
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 6.9e-120 435.6 577 47.3
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 1.1e-117 428.3 646 44.7
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 9.7e-114 415.2 680 41.8
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 9.1e-112 408.7 719 41.2
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 5.0e-110 402.9 641 43.1
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 8.5e-110 402.1 638 42.9
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 1.6e-108 397.9 714 41.0
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 2.7e-108 397.1 682 40.9
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.8e-107 394.4 686 41.3
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 2.6e-106 390.6 675 41.3
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 4.4e-106 389.8 501 49.7
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 7.4e-106 389.0 693 40.4
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 1.2e-103 381.7 620 43.1
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 2.2e-102 377.5 620 43.2
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 6.5e-102 375.9 551 44.3
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 3.2e-101 373.6 672 40.3
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 3.1e-96 357.1 683 38.9
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 5.9e-95 352.8 537 43.8
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 2.9e-94 350.5 678 39.2
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 6.5e-94 349.4 649 40.7
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 1.5e-93 348.2 684 38.6
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 1.5e-93 348.2 684 38.6
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 6.3e-89 332.8 551 42.8
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 7.0e-88 329.3 540 41.1
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 2.9e-86 323.9 438 49.8
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 2.1e-84 317.8 282 58.5
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 1.8e-83 314.7 604 39.4
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 2.6e-74 284.3 189 72.0
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 5.0e-70 270.0 137 98.5
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 1.6e-68 265.0 513 38.2
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 8.9e-67 259.2 559 39.0
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 8.3e-65 252.7 269 51.3
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 1.2e-58 232.3 202 56.9
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.6e-47 195.3 241 46.1
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 2.7e-47 194.5 432 35.0
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 2.3e-46 191.4 121 76.9
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 5.1e-46 190.3 236 45.3
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 1.1e-45 189.1 177 59.3
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 1.6e-44 185.3 198 53.5
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 2.6e-42 177.9 174 58.6
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 2.2e-41 174.9 299 44.5
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 4.2e-40 170.6 204 42.2
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 1.8e-35 155.2 133 60.2
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 1.4e-32 145.6 131 62.6
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 6.0e-31 140.2 352 34.1
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 2.5e-29 134.8 112 56.2
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 3.3e-29 134.4 185 47.0
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 4.3e-29 134.0 150 49.3
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 3.5e-23 114.4 87 65.5
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 4.6e-23 114.0 194 44.3
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.2e-18 99.4 117 44.4
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 2.6e-18 98.2 74 58.1
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 7.9e-15 86.7 110 45.5
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 1.3e-12 79.3 73 49.3
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 4.8e-12 77.4 72 50.0
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 5.3e-11 73.9 62 56.5
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 4.2e-08 64.3 99 45.5
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 7.2e-08 63.5 65 50.8
Oeu061605.1 Olea europaea HOM05D004806 ORTHO05D005397 1.2e-07 62.8 53 52.8
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 1.6e-07 62.4 40 67.5
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 2.1e-07 62.0 45 64.4
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 1.3e-06 59.3 87 33.3
SalBow2G3552 Salvia bowleyana HOM05D034888 ORTHO05D005397 3.9e-06 57.8 44 61.4
Sc11g0006970 Simmondsia chinensis HOM05D004806 ORTHO05D005397 3.9e-06 57.8 62 50.0
MD12G1168400 Malus domestica HOM05D004806 ORTHO05D005397 8.7e-06 56.6 29 82.8


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