Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8032 Trifolium pratense HOM05D002907 ORTHO05D000065 2.6e-92 342.0 171 100.0
TPR.G13958 Trifolium pratense HOM05D036439 ORTHO05D010576 1.0e-64 250.4 172 78.5
TPR.G6063 Trifolium pratense HOM05D000096 ORTHO05D000065 3.7e-59 231.9 155 76.1
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 5.8e-36 154.8 155 52.3
Medtr5g027390 Medicago truncatula HOM05D002907 ORTHO05D000065 4.9e-27 125.2 128 50.8
Medtr3g032330 Medicago truncatula HOM05D002907 ORTHO05D000065 3.5e-25 119.0 149 45.0
TPR.G28204 Trifolium pratense HOM05D002907 ORTHO05D000065 1.8e-24 116.7 156 41.7
Medtr8g039230 Medicago truncatula HOM05D002907 ORTHO05D000065 2.3e-24 116.3 119 50.4
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 5.0e-11 72.0 146 36.3
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 1.9e-10 70.1 139 36.0
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.6e-09 65.5 166 26.5
ECA236G3020 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-08 63.9 145 29.7
ECA135G0004 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.8e-08 63.5 145 29.7
TWI53G0107 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 3.9e-08 62.4 160 26.2
ECA234G1952 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.7e-08 61.2 139 30.2
ECA238G3734 Erigeron canadensis HOM05D006295 ORTHO05D008061 8.7e-08 61.2 113 32.7
Nitab4.5_0000242g0060 Nicotiana tabacum HOM05D002907 ORTHO05D000065 1.5e-07 60.5 73 42.5
TPR.G31008 Trifolium pratense HOM05D036439 ORTHO05D010576 1.9e-07 60.1 45 62.2
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 59.7 108 32.4
DCAR_017346 Daucus carota HOM05D012849 ORTHO05D014614 2.5e-07 59.7 175 26.9
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 2.5e-07 59.7 158 31.6
Peaxi162Scf00115g00007 Petunia axillaris HOM05D002907 ORTHO05D000065 2.5e-07 59.7 125 33.6
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-07 59.3 108 32.4
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-07 59.3 108 32.4
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.9 108 32.4
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 5.7e-07 58.5 108 32.4
ECA236G2726 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.7e-07 58.5 135 31.1
C08p36900 Brassica napus HOM05D000313 ORTHO05D000065 9.7e-07 57.8 107 31.8
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 57.0 108 30.6
CAN.G1160.3 Capsicum annuum HOM05D002907 ORTHO05D000065 1.6e-06 57.0 132 31.8
DCAR_032054 Daucus carota HOM05D002907 ORTHO05D000065 2.2e-06 56.6 163 26.4
Medtr6g465570 Medicago truncatula HOM05D008036 ORTHO05D008317 2.2e-06 56.6 150 30.7
Solyc11g032020.1 Solanum lycopersicum HOM05D002907 ORTHO05D000065 2.2e-06 56.6 113 31.9
A01p22490 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 56.2 75 37.3
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 2.8e-06 56.2 154 26.0
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 4.8e-06 55.5 152 27.6
Nitab4.5_0002746g0030 Nicotiana tabacum HOM05D002907 ORTHO05D000065 4.8e-06 55.5 136 30.9
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 4.8e-06 55.5 161 29.2
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-06 54.7 120 29.2


User provided reference genes

Program Settings