Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8002 Trifolium pratense HOM05D000954 ORTHO05D413348 1.4e-37 159.1 75 100.0
Psat4g034840 Pisum sativum HOM05D000954 ORTHO05D000822 1.8e-10 68.9 49 69.4
TPR.G7982 Trifolium pratense HOM05D000954 ORTHO05D000822 7.0e-10 67.0 49 65.3
Medtr4g116070 Medicago truncatula HOM05D000954 ORTHO05D000822 2.0e-09 65.5 49 65.3
Medtr4g116040 Medicago truncatula HOM05D000954 ORTHO05D000822 7.7e-09 63.5 49 61.2
Ca_03107_v3 Cicer arietinum L. HOM05D000954 ORTHO05D000822 5.0e-08 60.8 49 59.2
Ca_21640_v3 Cicer arietinum L. HOM05D000954 ORTHO05D000822 5.0e-08 60.8 49 61.2
arahy.Tifrunner.gnm1.ann1.22VPXE Arachis hypogaea HOM05D000954 ORTHO05D000822 1.1e-07 59.7 49 59.2
arahy.Tifrunner.gnm1.ann1.8SAY1Y Arachis hypogaea HOM05D000954 ORTHO05D000822 1.9e-07 58.9 40 70.0
VMungo1215G2137 Vigna mungo HOM05D000954 ORTHO05D000822 1.9e-07 58.9 40 65.0
VMungo1309G0613 Vigna mungo HOM05D000954 ORTHO05D000822 3.2e-07 58.2 40 60.0
Lj6g0012399 Lotus japonicus HOM05D000954 ORTHO05D000822 7.2e-07 57.0 49 55.1
Medtr2g451510 Medicago truncatula HOM05D000954 ORTHO05D000822 7.2e-07 57.0 49 53.1
Phvul.003G171800 Phaseolus vulgaris HOM05D000954 ORTHO05D000822 7.2e-07 57.0 47 55.3
Haze_25452 Corylus avellana HOM05D000954 ORTHO05D000822 9.4e-07 56.6 47 55.3
Glyma.17G108200 Glycine max HOM05D000954 ORTHO05D000822 9.4e-07 56.6 49 55.1
Psat1g021080 Pisum sativum HOM05D000954 ORTHO05D000822 9.4e-07 56.6 49 55.1
TPR.G1734 Trifolium pratense HOM05D000954 ORTHO05D000822 9.4e-07 56.6 49 55.1
Glyma.13G163000 Glycine max HOM05D000954 ORTHO05D000822 1.2e-06 56.2 49 55.1
Glyma.15G197800 Glycine max HOM05D000954 ORTHO05D000822 2.1e-06 55.5 47 53.2
Lalb_Chr08g0233541 Lupinus albus HOM05D000954 ORTHO05D000822 2.1e-06 55.5 47 55.3
Actinidia21928 Actinidia chinensis HOM05D000954 ORTHO05D000822 2.7e-06 55.1 47 55.3
arahy.Tifrunner.gnm1.ann1.DFNV57 Arachis hypogaea HOM05D000954 ORTHO05D000822 2.7e-06 55.1 49 55.1
arahy.Tifrunner.gnm1.ann1.RJX8W8 Arachis hypogaea HOM05D000954 ORTHO05D000822 2.7e-06 55.1 49 55.1
Glyma.09G091100 Glycine max HOM05D000954 ORTHO05D000822 2.7e-06 55.1 49 53.1
Lalb_Chr12g0198361 Lupinus albus HOM05D000954 ORTHO05D000822 2.7e-06 55.1 39 61.5
Phvul.009G212400 Phaseolus vulgaris HOM05D000954 ORTHO05D000822 2.7e-06 55.1 40 57.5
Cfa002266 Carpinus fangiana HOM05D000954 ORTHO05D000822 3.6e-06 54.7 47 53.2
Gohir.A06G052300 Gossypium hirsutum HOM05D000954 ORTHO05D000822 4.7e-06 54.3 38 60.5
Gohir.D06G051300 Gossypium hirsutum HOM05D000954 ORTHO05D000822 4.7e-06 54.3 38 60.5
Gorai.010G059600 Gossypium raimondii HOM05D000954 ORTHO05D000822 4.7e-06 54.3 38 60.5
CiPaw.04G177200 Carya illinoinensis HOM05D000954 ORTHO05D000822 6.1e-06 53.9 47 55.3
Lalb_Chr23g0275901 Lupinus albus HOM05D000954 ORTHO05D000822 8.0e-06 53.5 49 51.0


User provided reference genes

Program Settings