Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7996 Trifolium pratense HOM05D000225 ORTHO05D001595 7.9e-101 370.5 200 100.0
TPR.G14464 Trifolium pratense HOM05D000225 ORTHO05D001595 5.8e-19 98.6 194 36.1
Psat2g024320 Pisum sativum HOM05D000225 ORTHO05D001595 2.9e-18 96.3 225 33.3
TPR.G14448 Trifolium pratense HOM05D000225 ORTHO05D001595 3.5e-16 89.4 203 32.0
Medtr5g086130 Medicago truncatula HOM05D000225 ORTHO05D001595 1.1e-14 84.3 202 30.2
Medtr5g086120 Medicago truncatula HOM05D000225 ORTHO05D001595 1.5e-14 84.0 202 29.2
TPR.G40516 Trifolium pratense HOM05D000225 ORTHO05D411998 1.2e-13 80.9 44 81.8
TPR.G16744 Trifolium pratense HOM05D000225 ORTHO05D035032 1.1e-12 77.8 41 92.7
Medtr5g086310 Medicago truncatula HOM05D000225 ORTHO05D001595 1.9e-09 67.0 61 59.0
Glyma.11G254100 Glycine max HOM05D000324 ORTHO05D004875 2.4e-09 66.6 61 57.4
Phvul.001G265700 Phaseolus vulgaris HOM05D000324 ORTHO05D004875 2.4e-09 66.6 61 57.4
VMungo1383G3515 Vigna mungo HOM05D000324 ORTHO05D004875 2.4e-09 66.6 61 57.4
Ca_06115_v3 Cicer arietinum L. HOM05D000225 ORTHO05D001595 4.1e-09 65.9 63 57.1
Ca_17999_v3 Cicer arietinum L. HOM05D000324 ORTHO05D004875 7.1e-09 65.1 55 60.0
Glyma.05G151200 Glycine max HOM05D000324 ORTHO05D004875 9.2e-09 64.7 61 55.7
Psat7g076000 Pisum sativum HOM05D000324 ORTHO05D004875 9.2e-09 64.7 63 57.1
VMungo0647G1520 Vigna mungo HOM05D000225 ORTHO05D001595 1.6e-08 63.9 238 24.8
Medtr8g083170 Medicago truncatula HOM05D000324 ORTHO05D004875 2.1e-08 63.5 55 58.2
Glyma.02G270800 Glycine max HOM05D000225 ORTHO05D001595 2.7e-08 63.2 234 24.4
TPR.G11871 Trifolium pratense HOM05D000324 ORTHO05D004875 3.5e-08 62.8 73 52.1
Lj4g0014913 Lotus japonicus HOM05D000324 ORTHO05D004875 1.3e-07 60.8 55 56.4
Lj6g0003386 Lotus japonicus HOM05D000324 ORTHO05D004875 1.3e-07 60.8 61 52.5
arahy.Tifrunner.gnm1.ann1.8EJC90 Arachis hypogaea HOM05D000324 ORTHO05D004875 1.7e-07 60.5 61 50.8
arahy.Tifrunner.gnm1.ann1.II2GNC Arachis hypogaea HOM05D000324 ORTHO05D004875 1.7e-07 60.5 61 50.8
LjContig00564g0009683 Lotus japonicus HOM05D000225 ORTHO05D001595 1.7e-07 60.5 46 65.2
TPR.G14455 Trifolium pratense HOM05D000225 ORTHO05D001595 3.0e-07 59.7 39 66.7
Lalb_Chr13g0294751 Lupinus albus HOM05D000324 ORTHO05D004875 5.1e-07 58.9 94 40.4
Ca_16424_v3 Cicer arietinum L. HOM05D000324 ORTHO05D004875 8.7e-07 58.2 61 47.5
Eucgr.A01102 Eucalyptus grandis HOM05D000225 ORTHO05D001595 1.1e-06 57.8 69 49.3
TPR.G28942 Trifolium pratense HOM05D000324 ORTHO05D004875 1.5e-06 57.4 76 43.4
CiPaw.01G115100 Carya illinoinensis HOM05D000324 ORTHO05D004875 2.5e-06 56.6 61 47.5
Medtr5g086040 Medicago truncatula HOM05D000225 ORTHO05D001595 2.5e-06 56.6 65 49.2
TPR.G14458 Trifolium pratense HOM05D000225 ORTHO05D001595 2.5e-06 56.6 39 61.5
arahy.Tifrunner.gnm1.ann1.4B5N5U Arachis hypogaea HOM05D000225 ORTHO05D001595 3.3e-06 56.2 39 61.5
arahy.Tifrunner.gnm1.ann1.63XNPZ Arachis hypogaea HOM05D000225 ORTHO05D001595 3.3e-06 56.2 192 26.0
arahy.Tifrunner.gnm1.ann1.IM7I4N Arachis hypogaea HOM05D000225 ORTHO05D001595 3.3e-06 56.2 39 61.5
Lalb_Chr11g0075861 Lupinus albus HOM05D000324 ORTHO05D004875 3.3e-06 56.2 61 47.5
Psat5g099440 Pisum sativum HOM05D000324 ORTHO05D004875 3.3e-06 56.2 76 42.1
arahy.Tifrunner.gnm1.ann1.WWI1K6 Arachis hypogaea HOM05D000225 ORTHO05D001595 4.3e-06 55.8 200 25.5
Ca_06121_v3 Cicer arietinum L. HOM05D000225 ORTHO05D001595 4.3e-06 55.8 39 64.1
arahy.Tifrunner.gnm1.ann1.4F85GC Arachis hypogaea HOM05D000225 ORTHO05D001595 5.6e-06 55.5 39 61.5
arahy.Tifrunner.gnm1.ann1.T6F4RL Arachis hypogaea HOM05D000225 ORTHO05D001595 5.6e-06 55.5 39 61.5
Medtr5g086090 Medicago truncatula HOM05D000225 ORTHO05D001595 5.6e-06 55.5 75 40.0
Medtr5g086540 Medicago truncatula HOM05D000225 ORTHO05D001595 5.6e-06 55.5 39 64.1
TPR.G34844 Trifolium pratense HOM05D000225 ORTHO05D001595 5.6e-06 55.5 39 64.1
FAN05G4143 Fragaria x ananassa HOM05D000225 ORTHO05D001595 7.3e-06 55.1 60 46.7
Lalb_Chr04g0263521 Lupinus albus HOM05D000225 ORTHO05D001595 7.3e-06 55.1 39 56.4
MD04G1018900 Malus domestica HOM05D000324 ORTHO05D004875 7.3e-06 55.1 77 40.3
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 9.6e-06 54.7 61 47.5


User provided reference genes

Program Settings