Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7941 Trifolium pratense HOM05D009986 ORTHO05D012024 3.3e-26 121.3 79 100.0
Medtr2g078920 Medicago truncatula HOM05D009986 ORTHO05D012024 2.8e-09 65.1 60 66.7
Phvul.005G073600 Phaseolus vulgaris HOM05D009986 ORTHO05D012024 1.4e-08 62.8 58 62.1
CiPaw.11G170900 Carya illinoinensis HOM05D009986 ORTHO05D012024 4.0e-08 61.2 27 92.6
Ca_03511_v3 Cicer arietinum L. HOM05D009986 ORTHO05D012024 4.0e-08 61.2 26 96.2
Glyma.12G225700 Glycine max HOM05D009986 ORTHO05D012024 4.0e-08 61.2 27 92.6
Glyma.13G275300 Glycine max HOM05D009986 ORTHO05D012024 4.0e-08 61.2 27 92.6
Lj3g0024428 Lotus japonicus HOM05D009986 ORTHO05D012024 1.2e-07 59.7 27 88.9
Potri.001G398700 Populus trichocarpa HOM05D009986 ORTHO05D012024 1.5e-07 59.3 27 88.9
Potri.011G117001 Populus trichocarpa HOM05D009986 ORTHO05D012024 2.0e-07 58.9 27 88.9
RcHm_v2.0_Chr5g0033001 Rosa chinensis HOM05D009986 ORTHO05D012024 2.0e-07 58.9 26 92.3
Cfa020569 Carpinus fangiana HOM05D009986 ORTHO05D012024 2.6e-07 58.5 27 85.2
CANSAT56G3963 Cannabis sativa HOM05D009986 ORTHO05D012024 4.5e-07 57.8 27 85.2
Manes.15G088200 Manihot esculenta HOM05D009986 ORTHO05D012024 4.5e-07 57.8 27 85.2
Duzib213G0206 Durio zibethinus HOM05D009986 ORTHO05D012024 7.6e-07 57.0 27 81.5
Actinidia18774 Actinidia chinensis HOM05D009986 ORTHO05D012024 3.8e-06 54.7 27 77.8
BcaC03g14378 Brassica carinata HOM05D009986 ORTHO05D012024 8.4e-06 53.5 24 87.5
BolC2t07920H Brassica oleracea HOM05D009986 ORTHO05D012024 8.4e-06 53.5 24 87.5
BraA02t06139Z Brassica rapa HOM05D009986 ORTHO05D012024 8.4e-06 53.5 24 87.5
Carub.0008s1417 Capsella rubella HOM05D009986 ORTHO05D012024 8.4e-06 53.5 24 87.5
THA.LOC104811871 Tarenaya hassleriana HOM05D009986 ORTHO05D012024 8.4e-06 53.5 24 87.5


User provided reference genes

Program Settings