Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7920 Trifolium pratense HOM05D004473 ORTHO05D005652 3.5e-32 141.0 69 100.0
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 3.6e-21 104.4 61 85.2
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 3.6e-21 104.4 61 85.2
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 2.4e-20 101.7 61 83.6
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 2.6e-19 98.2 61 80.3
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.9e-15 84.3 57 71.9
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 1.1e-14 82.8 60 71.7
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 3.3e-14 81.3 60 71.7
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 4.3e-14 80.9 52 82.7
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 4.3e-14 80.9 65 67.7
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 4.8e-13 77.4 61 67.2
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 4.8e-13 77.4 61 63.9
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 8.1e-13 76.6 61 65.6
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 1.8e-12 75.5 61 65.6
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 2.4e-12 75.1 61 67.2
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 1.2e-11 72.8 61 63.9
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 2.0e-11 72.0 63 60.3
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 2.0e-11 72.0 61 62.3
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 2.6e-11 71.6 66 63.6
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 9.9e-11 69.7 61 62.3
Oeu012780.1 Olea europaea HOM05D001387 ORTHO05D001250 9.9e-11 69.7 62 64.5
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 4.9e-10 67.4 66 60.6
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 6.4e-10 67.0 61 62.3
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.4e-10 67.0 66 59.1
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.4e-10 67.0 66 59.1
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.4e-10 67.0 66 59.1
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.4e-10 67.0 66 59.1
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.4e-10 67.0 66 59.1
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 6.4e-10 67.0 66 59.1
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.1e-09 66.2 61 57.4
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.1e-09 66.2 61 57.4
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 2.4e-09 65.1 67 59.7
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 2.4e-09 65.1 67 59.7
Solyc09g061390.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.2e-09 64.7 64 57.8
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 7.1e-09 63.5 63 58.7
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 64 60.9
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 64 60.9
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 64 60.9
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 64 60.9
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 64 60.9
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-08 62.8 64 60.9
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.5e-08 61.2 61 55.7
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 4.6e-08 60.8 64 53.1
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 4.6e-08 60.8 67 58.2
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 1.1e-06 56.2 57 50.9
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 1.5e-06 55.8 64 50.0
Gorai.013G056700 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.5e-06 55.8 61 54.1
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 1.9e-06 55.5 39 69.2
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 1.9e-06 55.5 68 51.5
BraSC59t46519Z Brassica rapa HOM05D004473 ORTHO05D005652 4.3e-06 54.3 53 52.8
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.3e-06 54.3 62 56.5
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 7.4e-06 53.5 58 51.7
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 7.4e-06 53.5 58 51.7
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 7.4e-06 53.5 58 51.7
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 7.4e-06 53.5 58 51.7
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 7.4e-06 53.5 57 49.1
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 7.4e-06 53.5 57 49.1
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 7.4e-06 53.5 57 49.1
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 7.4e-06 53.5 57 49.1
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 9.6e-06 53.1 62 54.8


User provided reference genes

Program Settings