Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 3.3e-78 295.0 157 100.0
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 8.4e-66 253.8 156 86.5
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 3.7e-61 238.4 157 81.5
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 8.5e-58 227.3 157 80.9
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 6.9e-52 207.6 157 73.2
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.2e-51 206.8 157 73.9
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 5.9e-51 204.5 156 73.1
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 9.4e-49 197.2 157 72.0
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 1.2e-48 196.8 157 71.3
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 1.2e-48 196.8 157 72.6
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.4e-44 183.3 157 68.2
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 3.3e-38 162.2 161 62.7
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 2.8e-37 159.1 159 62.9
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.4e-36 156.8 157 61.1
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.8e-36 156.4 157 61.1
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 5.0e-34 148.3 132 66.7
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.5e-33 146.0 157 58.6
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 3.2e-33 145.6 171 57.9
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 7.2e-33 144.4 177 54.8
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 7.2e-33 144.4 155 60.0
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 7.2e-33 144.4 155 60.0
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 7.2e-33 144.4 141 61.7
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 9.4e-33 144.1 177 54.2
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.2e-32 143.7 157 58.0
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 2.1e-32 142.9 138 63.0
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 2.7e-32 142.5 182 53.8
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 2.7e-32 142.5 127 67.7
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 3.6e-32 142.1 179 52.5
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.0e-31 140.6 152 60.5
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.4e-31 140.2 149 58.4
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.4e-31 140.2 162 56.2
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.8e-31 139.8 142 61.3
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 2.3e-31 139.4 160 58.8
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 4.0e-31 138.7 163 57.7
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 5.2e-31 138.3 172 54.1
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 8.8e-31 137.5 167 57.5
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.5e-30 136.7 163 53.4
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.5e-30 136.7 163 53.4
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.5e-30 136.7 144 59.0
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.0e-30 136.3 185 50.8
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 2.6e-30 136.0 146 60.3
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 3.3e-30 135.6 169 51.5
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 5.7e-30 134.8 153 54.2
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 5.7e-30 134.8 180 52.2
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 5.7e-30 134.8 165 53.9
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 7.5e-30 134.4 128 62.5
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 9.7e-30 134.0 132 65.2
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 9.7e-30 134.0 172 52.9
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 1.7e-29 133.3 145 58.6
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.7e-29 133.3 165 55.2
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 2.2e-29 132.9 135 60.7
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.2e-29 132.9 135 60.7
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.2e-29 132.9 135 60.7
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.2e-29 132.9 135 60.7
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.8e-29 132.5 172 56.4
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 2.8e-29 132.5 93 78.5
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 2.8e-29 132.5 123 65.9
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 2.8e-29 132.5 149 56.4
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.8e-29 132.5 118 66.1
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 2.8e-29 132.5 172 51.7
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 3.7e-29 132.1 158 55.1
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 4.8e-29 131.7 162 57.4
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 4.8e-29 131.7 185 51.4
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 6.3e-29 131.3 136 61.0
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 6.3e-29 131.3 164 53.7
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 8.2e-29 131.0 144 59.7
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 8.2e-29 131.0 93 77.4
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 8.2e-29 131.0 164 53.7
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 8.2e-29 131.0 127 61.4
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 1.1e-28 130.6 90 78.9
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 1.4e-28 130.2 172 50.6
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.4e-28 130.2 168 53.0
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.4e-28 130.2 168 53.0
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 1.4e-28 130.2 167 53.9
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.8e-28 129.8 159 54.1
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.8e-28 129.8 159 54.1
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.8e-28 129.8 86 84.9
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 2.4e-28 129.4 90 77.8
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.4e-28 129.4 157 51.6
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 3.1e-28 129.0 92 73.9
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 3.1e-28 129.0 164 52.4
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 4.1e-28 128.6 160 52.5
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 5.3e-28 128.3 156 57.7
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 5.3e-28 128.3 159 53.5
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 5.3e-28 128.3 84 81.0
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 9.1e-28 127.5 99 73.7
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 9.1e-28 127.5 184 47.8
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.6e-27 126.7 116 67.2
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.6e-27 126.7 109 70.6
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.6e-27 126.7 160 53.8
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 2.0e-27 126.3 156 57.1
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.7e-27 125.9 138 57.2
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.7e-27 125.9 138 57.2
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 3.5e-27 125.6 162 54.9
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 4.5e-27 125.2 128 58.6
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 4.5e-27 125.2 84 79.8
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 5.9e-27 124.8 121 61.2
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.0e-26 124.0 170 51.2
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 1.7e-26 123.2 169 50.3
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.7e-26 123.2 124 56.5
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 3.8e-26 122.1 86 75.6
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 5.0e-26 121.7 96 70.8
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 1.6e-24 116.7 84 75.0
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 6.1e-24 114.8 95 64.2
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 6.1e-24 114.8 121 57.9
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 1.8e-23 113.2 168 46.4
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 8.8e-23 110.9 83 71.1
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 8.8e-23 110.9 83 71.1
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.4e-22 109.0 163 48.5
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 4.4e-22 108.6 90 65.6
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 7.0e-20 101.3 65 83.1
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 2.5e-17 92.8 82 61.0
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-14 83.6 113 48.7
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 2.6e-14 82.8 89 52.8
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.2e-13 79.7 87 55.2
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 2.2e-13 79.7 83 56.6
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.2e-08 63.9 59 64.4


User provided reference genes

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