Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 2.0e-195 685.6 363 100.0
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 1.7e-154 549.7 365 81.1
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 5.5e-145 518.1 364 78.0
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 1.6e-131 473.4 364 73.1
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 3.9e-122 442.2 362 68.2
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 4.3e-121 438.7 360 66.1
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 8.1e-120 434.5 364 65.7
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.9e-116 423.3 361 65.1
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 6.0e-115 418.3 380 63.7
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 1.3e-96 357.5 351 59.8
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 1.4e-95 354.0 364 54.4
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 8.7e-90 334.7 337 58.8
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 2.8e-88 329.7 363 51.5
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 4.0e-87 325.9 343 53.1
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 1.5e-86 323.9 336 53.9
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.4e-86 322.8 359 51.5
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 5.8e-86 322.0 359 51.5
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.4e-84 317.4 361 50.7
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.4e-84 317.4 346 52.9
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.4e-84 316.6 362 53.6
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.4e-84 316.6 362 53.6
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 3.5e-83 312.8 354 50.8
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 6.0e-83 312.0 360 50.8
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.7e-82 308.1 366 48.9
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 8.7e-82 308.1 323 55.1
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 7.4e-81 305.1 368 49.5
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 9.6e-81 304.7 371 50.1
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 3.7e-80 302.8 367 48.5
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 3.7e-80 302.8 366 49.2
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.0e-77 294.7 351 51.9
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 6.5e-77 292.0 328 49.4
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.1e-76 291.2 325 48.6
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.9e-76 290.4 328 49.1
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 3.2e-76 289.7 357 48.7
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 2.7e-75 286.6 312 51.9
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 3.9e-74 282.7 364 46.7
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 5.1e-74 282.3 362 46.1
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.6e-72 277.3 370 46.2
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 2.2e-72 276.9 366 45.4
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 3.7e-72 276.2 360 46.1
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.5e-70 270.8 367 43.3
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 2.2e-69 266.9 367 43.3
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.9e-69 266.5 347 46.1
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 3.2e-68 263.1 350 47.1
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.2e-67 261.2 375 43.2
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 7.9e-67 258.5 364 45.1
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 2.3e-66 256.9 319 48.9
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 8.8e-66 255.0 375 42.7
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 1.5e-65 254.2 358 42.7
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 4.3e-65 252.7 358 42.7
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 6.3e-64 248.8 267 53.6
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 6.3e-64 248.8 358 41.9
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 3.1e-63 246.5 318 45.0
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 6.9e-63 245.4 357 40.9
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 9.1e-63 245.0 353 45.6
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.0e-61 241.5 363 41.6
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 3.2e-60 236.5 274 49.3
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 4.2e-60 236.1 341 41.9
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 2.7e-59 233.4 341 43.1
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 1.5e-57 227.6 355 41.4
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 3.3e-57 226.5 319 44.5
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.3e-57 226.5 332 41.9
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 3.3e-57 226.5 263 52.5
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 4.4e-57 226.1 263 52.5
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 5.7e-57 225.7 332 42.5
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.3e-53 214.5 362 39.2
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 1.7e-53 214.2 369 40.1
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 2.2e-53 213.8 333 40.8
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 3.8e-53 213.0 345 42.9
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 6.5e-53 212.2 279 46.6
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 8.5e-53 211.8 342 39.8
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.9e-52 210.7 291 44.7
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 2.5e-52 210.3 295 43.4
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 4.7e-51 206.1 295 43.1
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 4.7e-51 206.1 278 45.3
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 3.3e-49 199.9 203 56.7
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 5.7e-49 199.1 333 40.2
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.3e-45 188.0 329 35.6
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 8.5e-45 185.3 267 43.8
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 8.5e-45 185.3 253 43.5
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 6.1e-43 179.1 229 45.9
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 4.0e-42 176.4 223 49.8
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.7e-40 171.0 297 41.1
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 4.8e-40 169.5 376 33.0
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 4.1e-39 166.4 364 33.2
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 9.1e-39 165.2 361 34.6
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 2.5e-36 157.1 350 33.7
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 7.2e-36 155.6 362 32.0
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 7.2e-36 155.6 349 35.5
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 9.4e-36 155.2 350 34.9
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 9.4e-36 155.2 350 34.9
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 9.4e-36 155.2 350 34.6
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 1.2e-35 154.8 349 34.1
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 2.1e-35 154.1 350 34.6
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.1e-35 154.1 350 34.3
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 1.4e-34 151.4 353 33.1
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 3.0e-34 150.2 349 33.2
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 6.3e-32 142.5 353 33.4
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.4e-31 141.4 353 33.4
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 3.3e-28 130.2 141 54.6
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 6.1e-27 125.9 150 47.3
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 2.3e-26 124.0 283 33.2
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 8.3e-24 115.5 278 32.7
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 3.3e-20 103.6 287 28.6
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 9.5e-20 102.1 240 34.2
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 1.2e-19 101.7 294 27.6
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 6.1e-19 99.4 317 29.3
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 3.1e-18 97.1 104 49.0
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 5.2e-18 96.3 271 29.2
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 8.9e-18 95.5 88 53.4
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 6.0e-14 82.8 261 28.0
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 1.7e-13 81.3 136 39.0
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.9e-12 77.8 109 42.2
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.9e-12 77.8 109 42.2
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.9e-08 63.9 79 41.8
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 4.9e-08 63.2 66 48.5
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 7.8e-06 55.8 131 35.9


User provided reference genes

Program Settings