Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7848 Trifolium pratense HOM05D000260 ORTHO05D000318 2.4e-147 525.4 246 100.0
TPR.G20721 Trifolium pratense HOM05D000260 ORTHO05D000318 6.2e-140 500.7 246 96.7
Psat6g225320 Pisum sativum HOM05D000260 ORTHO05D000318 4.4e-93 345.1 246 67.9
Ca_11133_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 2.2e-92 342.8 246 68.7
Medtr1g110180 Medicago truncatula HOM05D000260 ORTHO05D000318 8.2e-92 340.9 249 67.5
Medtr1g110160 Medicago truncatula HOM05D000072 ORTHO05D000026 1.1e-88 330.5 248 67.7
Psat6g225280 Pisum sativum HOM05D000260 ORTHO05D000318 1.3e-73 280.4 245 58.8
VMungo0720G1250 Vigna mungo HOM05D000260 ORTHO05D000318 2.6e-53 213.0 245 49.0
Glyma.10G271400 Glycine max HOM05D000260 ORTHO05D000318 1.2e-50 204.1 244 48.0
Phvul.007G030700 Phaseolus vulgaris HOM05D000260 ORTHO05D000318 3.1e-46 189.5 237 45.6
Glyma.20G119400 Glycine max HOM05D000260 ORTHO05D000318 1.5e-45 187.2 250 43.2
Glyma.20G119300 Glycine max HOM05D000260 ORTHO05D000318 2.6e-45 186.4 247 41.3
Glyma.20G119600 Glycine max HOM05D000260 ORTHO05D000318 4.4e-45 185.7 236 43.6
VMungo0720G2707 Vigna mungo HOM05D000260 ORTHO05D000318 1.2e-39 167.5 246 39.8
Phvul.007G030800 Phaseolus vulgaris HOM05D000260 ORTHO05D000318 1.8e-38 163.7 232 39.7
Lalb_Chr06g0165911 Lupinus albus HOM05D000072 ORTHO05D000026 2.9e-36 156.4 244 36.9
Lj5g0003818 Lotus japonicus HOM05D000072 ORTHO05D000026 3.8e-36 156.0 244 36.9
TPR.G20730 Trifolium pratense HOM05D000072 ORTHO05D010362 5.4e-35 152.1 249 38.2
TPR.G4927 Trifolium pratense HOM05D000260 ORTHO05D010362 5.6e-32 142.1 244 31.6
Lj5g0013417 Lotus japonicus HOM05D000260 ORTHO05D000318 1.6e-31 140.6 247 33.6
Medtr1g110120 Medicago truncatula HOM05D000260 ORTHO05D000318 1.6e-31 140.6 244 34.4
TPR.G4824 Trifolium pratense HOM05D000260 ORTHO05D000318 3.6e-31 139.4 259 35.9
Medtr1g110130 Medicago truncatula HOM05D000260 ORTHO05D000318 8.1e-31 138.3 245 36.3
Medtr1g110110 Medicago truncatula HOM05D000260 ORTHO05D000318 1.4e-30 137.5 241 35.3
arahy.Tifrunner.gnm1.ann1.ZU3KY9 Arachis hypogaea HOM05D000260 ORTHO05D000318 3.1e-30 136.3 246 36.6
Glyma.20G120100 Glycine max HOM05D000260 ORTHO05D000318 5.2e-30 135.6 248 35.5
Medtr1g110220 Medicago truncatula HOM05D000072 ORTHO05D000026 5.2e-30 135.6 241 34.9
Glyma.20G118500 Glycine max HOM05D000072 ORTHO05D000026 8.9e-30 134.8 247 35.2
Psat6g225520 Pisum sativum HOM05D000072 ORTHO05D000026 1.2e-29 134.4 246 32.1
Lalb_Chr02g0145781 Lupinus albus HOM05D000260 ORTHO05D000318 1.5e-29 134.0 246 32.9
Psat5g229560 Pisum sativum HOM05D000260 ORTHO05D000318 2.6e-29 133.3 234 31.2
Glyma.20G118600 Glycine max HOM05D000072 ORTHO05D000026 9.9e-29 131.3 248 35.1
Ca_11132_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 4.2e-27 125.9 221 34.4
Medtr1g108890 Medicago truncatula HOM05D000260 ORTHO05D010362 9.3e-27 124.8 247 33.6
Psat6g225240 Pisum sativum HOM05D000260 ORTHO05D000318 1.6e-26 124.0 220 36.4
Ca_11131_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 2.1e-26 123.6 247 31.2
TPR.G4939 Trifolium pratense HOM05D000072 ORTHO05D000026 2.7e-26 123.2 244 32.4
arahy.Tifrunner.gnm1.ann1.S2DFEG Arachis hypogaea HOM05D000260 ORTHO05D000318 3.5e-26 122.9 248 33.9
arahy.Tifrunner.gnm1.ann1.MDY1G5 Arachis hypogaea HOM05D000260 ORTHO05D000318 6.0e-26 122.1 247 32.8
arahy.Tifrunner.gnm1.ann1.27N6DD Arachis hypogaea HOM05D000260 ORTHO05D000318 7.8e-26 121.7 247 32.0
TPR.G20728 Trifolium pratense HOM05D000260 ORTHO05D000318 1.7e-25 120.6 250 32.0
Ca_11130_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 3.9e-25 119.4 247 31.6
arahy.Tifrunner.gnm1.ann1.HNK57V Arachis hypogaea HOM05D008908 ORTHO05D010362 6.6e-25 118.6 240 32.9
Glyma.10G271200 Glycine max HOM05D000260 ORTHO05D000318 1.5e-24 117.5 242 31.8
VMungo0720G1457 Vigna mungo HOM05D000260 ORTHO05D000318 2.5e-24 116.7 244 31.6
arahy.Tifrunner.gnm1.ann1.H41NY2 Arachis hypogaea HOM05D000072 ORTHO05D000026 3.3e-24 116.3 237 36.7
Glyma.20G119700 Glycine max HOM05D000260 ORTHO05D000318 7.3e-24 115.2 236 31.8
VMungo0720G2375 Vigna mungo HOM05D000072 ORTHO05D000026 7.3e-24 115.2 252 34.5
Phvul.007G031000 Phaseolus vulgaris HOM05D000260 ORTHO05D000318 9.6e-24 114.8 243 32.1
arahy.Tifrunner.gnm1.ann1.X7PJ8H Arachis hypogaea HOM05D000260 ORTHO05D000318 2.1e-23 113.6 251 31.9
Glyma.10G271701 Glycine max HOM05D000072 ORTHO05D000026 4.8e-23 112.5 241 31.1
arahy.Tifrunner.gnm1.ann1.H9HPQV Arachis hypogaea HOM05D000260 ORTHO05D000318 1.8e-22 110.5 205 36.1
Phvul.007G030900 Phaseolus vulgaris HOM05D000260 ORTHO05D000318 1.8e-22 110.5 243 32.1
Glyma.10G098400 Glycine max HOM05D000072 ORTHO05D000026 2.4e-22 110.2 237 33.3
Phvul.007G252500 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 1.2e-21 107.8 246 32.9
arahy.Tifrunner.gnm1.ann1.M9I28E Arachis hypogaea HOM05D000260 ORTHO05D000318 2.0e-21 107.1 220 31.4
VMungo0720G0489 Vigna mungo HOM05D000260 ORTHO05D000318 4.5e-21 105.9 246 32.1
Phvul.007G030100 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 5.8e-21 105.5 224 33.9
arahy.Tifrunner.gnm1.ann1.2TIK4C Arachis hypogaea HOM05D000072 ORTHO05D000026 4.9e-20 102.4 225 30.7
Thecc.02G224000 Theobroma cacao HOM05D016466 ORTHO05D010362 4.9e-20 102.4 246 32.1
Manes.14G105800 Manihot esculenta HOM05D000260 ORTHO05D000318 6.0e-18 95.5 248 31.9
Phvul.007G030000 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 2.3e-17 93.6 237 30.8
Lalb_Chr21g0308771 Lupinus albus HOM05D000072 ORTHO05D000026 5.1e-17 92.4 216 30.6
Ciclev10014492m.g Citrus clementina HOM05D000260 ORTHO05D000318 3.3e-16 89.7 244 31.1
Medtr1g110260 Medicago truncatula HOM05D000072 ORTHO05D000026 3.3e-16 89.7 163 33.1
Dinv16122 Davidia involucrata HOM05D000260 ORTHO05D010362 5.6e-16 89.0 250 30.0
Ciclev10014231m.g Citrus clementina HOM05D000072 ORTHO05D000026 7.4e-16 88.6 217 31.8
Potri.010G121350 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.6e-15 87.4 225 31.1
arahy.Tifrunner.gnm1.ann1.GC9D1H Arachis hypogaea HOM05D000072 ORTHO05D000026 2.8e-15 86.7 267 30.0
Potri.010G121025 Populus trichocarpa HOM05D008908 ORTHO05D010362 4.8e-15 85.9 211 32.2
vmacro10588 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.4e-14 84.3 251 28.7
QL01p040218 Quercus lobata HOM05D000260 ORTHO05D000318 1.8e-14 84.0 245 30.2
VMungo0720G1331 Vigna mungo HOM05D000072 ORTHO05D000026 1.8e-14 84.0 243 26.7
arahy.Tifrunner.gnm1.ann1.12LLDS Arachis hypogaea HOM05D000072 ORTHO05D000026 3.1e-14 83.2 267 28.1
QL05p056320 Quercus lobata HOM05D000072 ORTHO05D000026 5.3e-14 82.4 246 29.3
vmacro10586 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 5.3e-14 82.4 249 29.3
Potri.010G121100 Populus trichocarpa HOM05D000260 ORTHO05D000318 6.9e-14 82.0 195 32.8
Ciclev10014945m.g Citrus clementina HOM05D000072 ORTHO05D000026 1.2e-13 81.3 242 27.3
Lalb_Chr10g0096451 Lupinus albus HOM05D000260 ORTHO05D000318 2.0e-13 80.5 235 30.6
vmacro10594 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 3.4e-13 79.7 240 25.4
Nitab4.5_0004981g0060 Nicotiana tabacum HOM05D000260 ORTHO05D000318 9.9e-13 78.2 234 27.4
Actinidia16679 Actinidia chinensis HOM05D000260 ORTHO05D000318 1.3e-12 77.8 241 29.5
Nitab4.5_0002112g0030 Nicotiana tabacum HOM05D000260 ORTHO05D000318 1.3e-12 77.8 251 25.9
PGSC0003DMG400030533 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.3e-12 77.8 251 26.3
Thecc.02G223900 Theobroma cacao HOM05D016466 ORTHO05D010362 2.2e-12 77.0 233 26.2
CSS0013107 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 8.4e-12 75.1 230 25.7
Ciclev10014868m.g Citrus clementina HOM05D000072 ORTHO05D000026 1.1e-11 74.7 235 28.5
vmacro10591 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.1e-11 74.7 240 26.2
Solyc05g008960.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 1.9e-11 73.9 250 26.8
Solyc05g009090.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 1.9e-11 73.9 219 26.5
Migut.L01035 Erythranthe guttata HOM05D000260 ORTHO05D000318 2.4e-11 73.6 212 29.7
PGSC0003DMG400014577 Solanum tuberosum HOM05D000072 ORTHO05D000026 3.2e-11 73.2 220 25.9
CSS0009234 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.2e-11 72.8 225 25.3
CSS0018926 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.2e-11 72.8 225 25.3
vmacro10593 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 4.2e-11 72.8 242 28.9
Peaxi162Scf00179g00316 Petunia axillaris HOM05D000260 ORTHO05D000318 7.1e-11 72.0 257 22.6
vmacro10592 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 7.1e-11 72.0 236 27.5
HanXRQChr15g0477501 Helianthus annuus HOM05D000072 ORTHO05D000026 9.3e-11 71.6 243 28.4
Nitab4.5_0000694g0060 Nicotiana tabacum HOM05D000260 ORTHO05D000318 9.3e-11 71.6 219 26.0
Sopen04g002450 Solanum pennellii HOM05D000260 ORTHO05D000318 9.3e-11 71.6 234 25.2
Actinidia37053 Actinidia chinensis HOM05D000260 ORTHO05D000318 1.2e-10 71.2 242 27.7
PGSC0003DMG400006000 Solanum tuberosum HOM05D000072 ORTHO05D000026 1.2e-10 71.2 232 25.0
Nitab4.5_0000057g0100 Nicotiana tabacum HOM05D000072 ORTHO05D000026 1.6e-10 70.9 248 25.0
vmacro21019 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.6e-10 70.9 222 27.9
Nitab4.5_0005528g0080 Nicotiana tabacum HOM05D000260 ORTHO05D000318 2.7e-10 70.1 235 26.8
QL01p010994 Quercus lobata HOM05D000072 ORTHO05D000026 2.7e-10 70.1 260 26.9
GSVIVG01011850001 Vitis vinifera HOM05D000260 ORTHO05D000318 3.5e-10 69.7 233 27.0
CSS0000188 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.6e-10 69.3 238 25.6
CSS0021340 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.6e-10 69.3 236 25.4
CSS0044393 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.6e-10 69.3 238 25.6
CSS0011658 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 6.0e-10 68.9 230 24.8
CSS0044018 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 6.0e-10 68.9 253 26.5
Oeu027710.1 Olea europaea HOM05D000072 ORTHO05D000026 7.9e-10 68.6 242 26.4
Manes.14G106000 Manihot esculenta HOM05D000072 ORTHO05D000026 1.3e-09 67.8 169 30.8
Sopen05g004740 Solanum pennellii HOM05D000260 ORTHO05D000318 1.3e-09 67.8 231 25.5
Solyc05g008990.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 1.8e-09 67.4 231 25.5
Nitab4.5_0000057g0070 Nicotiana tabacum HOM05D000260 ORTHO05D000318 2.3e-09 67.0 242 24.4
CiPaw.06G017800 Carya illinoinensis HOM05D000072 ORTHO05D000026 3.0e-09 66.6 251 28.3
Nitab4.5_0005528g0040 Nicotiana tabacum HOM05D000072 ORTHO05D000026 3.0e-09 66.6 221 28.1
PGSC0003DMG400030579 Solanum tuberosum HOM05D000072 ORTHO05D000026 3.0e-09 66.6 255 26.3
CSS0014137 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.1e-08 64.7 242 25.2
Solyc04g007390.4 Solanum lycopersicum HOM05D000260 ORTHO05D000318 1.1e-08 64.7 254 24.0
Actinidia16678 Actinidia chinensis HOM05D000260 ORTHO05D000318 1.5e-08 64.3 242 28.5
PGSC0003DMG400030536 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.9e-08 63.9 227 28.6
TPR.G20729 Trifolium pratense HOM05D000072 ORTHO05D000026 1.9e-08 63.9 106 40.6
CSS0049650 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.3e-08 62.8 259 23.2
Nitab4.5_0014879g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 4.3e-08 62.8 229 26.6
CSS0017696 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 7.4e-08 62.0 258 25.2
CSS0034234 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 7.4e-08 62.0 213 24.4
ClCG05G022530 Citrullus lanatus HOM05D000260 ORTHO05D000318 7.4e-08 62.0 205 29.8
Sopen05g004750 Solanum pennellii HOM05D000260 ORTHO05D000318 7.4e-08 62.0 222 28.8
HanXRQChr15g0477481 Helianthus annuus HOM05D000260 ORTHO05D000318 9.6e-08 61.6 224 26.3
Sc22g0001220 Simmondsia chinensis HOM05D000260 ORTHO05D000318 9.6e-08 61.6 138 29.7
Manes.14G105900 Manihot esculenta HOM05D000260 ORTHO05D000318 1.3e-07 61.2 192 28.6
Peaxi162Scf00179g00221 Petunia axillaris HOM05D000260 ORTHO05D000318 1.3e-07 61.2 245 27.8
Manes.14G106050 Manihot esculenta HOM05D000072 ORTHO05D000026 1.6e-07 60.8 195 29.7
Peaxi162Scf00179g00126 Petunia axillaris HOM05D000072 ORTHO05D000026 1.6e-07 60.8 228 27.6
Sopen05g004700 Solanum pennellii HOM05D000260 ORTHO05D000318 1.6e-07 60.8 237 24.9
CsaV3_5G034530 Cucumis sativus L. HOM05D000260 ORTHO05D000318 4.8e-07 59.3 235 27.2
Solyc05g008940.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 4.8e-07 59.3 256 25.0
CSS0009724 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 6.2e-07 58.9 235 23.4
QL05p057061 Quercus lobata HOM05D046585 ORTHO05D026090 8.1e-07 58.5 145 34.5
Actinidia14918 Actinidia chinensis HOM05D000260 ORTHO05D000318 1.1e-06 58.2 141 29.8
EL10Ac6g14321 Beta vulgaris HOM05D000260 ORTHO05D000318 1.1e-06 58.2 185 25.9
Hma1.2p1_2390F.1_g321190 Hydrangea macrophylla HOM05D000072 ORTHO05D000026 1.1e-06 58.2 251 29.1
CAN.G610.17 Capsicum annuum HOM05D000072 ORTHO05D000026 1.4e-06 57.8 252 26.2
CSS0049761 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 1.8e-06 57.4 152 27.6
HanXRQChr15g0477491 Helianthus annuus HOM05D000072 ORTHO05D000026 1.8e-06 57.4 231 26.4
CAN.G610.32 Capsicum annuum HOM05D000260 ORTHO05D000318 4.0e-06 56.2 231 22.9
QL01p010170 Quercus lobata HOM05D000260 ORTHO05D000318 4.0e-06 56.2 234 30.8
CsaV3_5G034550 Cucumis sativus L. HOM05D000072 ORTHO05D000026 6.9e-06 55.5 236 28.0


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