Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.2e-103 379.8 190 100.0
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 3.1e-86 322.0 189 87.3
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 9.2e-83 310.5 189 84.1
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 3.0e-81 305.4 189 83.6
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 1.9e-72 276.2 198 72.7
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 7.3e-72 274.2 199 72.9
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 2.3e-70 269.2 199 70.9
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 8.9e-70 267.3 199 72.4
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.9e-67 259.6 199 69.8
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 5.4e-67 258.1 199 69.3
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 1.3e-65 253.4 189 70.9
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 3.6e-63 245.4 195 65.6
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 4.4e-61 238.4 146 84.2
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 2.7e-58 229.2 192 62.5
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.0e-57 227.3 194 60.3
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 3.9e-57 225.3 194 60.3
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 6.6e-57 224.6 197 61.4
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 8.7e-57 224.2 198 61.1
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 3.3e-56 222.2 189 60.3
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 3.3e-56 222.2 194 60.3
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 5.6e-56 221.5 189 61.4
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.6e-56 221.5 190 62.1
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.6e-55 219.9 190 61.6
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.6e-55 219.9 190 61.1
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.6e-55 219.9 190 61.6
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 1.6e-55 219.9 140 72.9
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.6e-55 219.9 195 59.5
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 2.1e-55 219.5 192 61.5
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.4e-54 216.9 167 64.1
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 1.8e-54 216.5 198 60.1
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 2.4e-54 216.1 191 57.6
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 2.4e-54 216.1 140 71.4
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 2.4e-54 216.1 142 69.0
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 2.4e-54 216.1 186 59.7
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 2.4e-54 216.1 186 59.7
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 3.1e-54 215.7 189 58.2
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 3.1e-54 215.7 204 57.4
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 4.0e-54 215.3 196 59.2
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 4.0e-54 215.3 186 59.1
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 5.3e-54 214.9 191 60.2
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 6.9e-54 214.5 197 61.4
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 9.0e-54 214.2 188 59.0
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 9.0e-54 214.2 191 60.2
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 9.0e-54 214.2 198 59.6
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.2e-53 213.8 202 58.4
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 2.0e-53 213.0 189 59.3
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 2.6e-53 212.6 245 50.6
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 2.6e-53 212.6 192 57.8
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 2.6e-53 212.6 192 59.4
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 7.6e-53 211.1 191 57.6
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 1.7e-52 209.9 140 70.0
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 1.7e-52 209.9 140 70.0
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 2.2e-52 209.5 191 57.6
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 3.8e-52 208.8 183 56.8
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 3.8e-52 208.8 166 62.0
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 3.8e-52 208.8 195 57.9
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 1.1e-51 207.2 197 54.8
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 1.4e-51 206.8 199 56.8
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 1.4e-51 206.8 197 58.9
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 2.4e-51 206.1 141 69.5
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 4.2e-51 205.3 198 55.1
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 5.4e-51 204.9 142 67.6
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 7.1e-51 204.5 123 74.0
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 9.3e-51 204.1 211 55.5
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.6e-50 203.4 194 57.2
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 2.1e-50 203.0 167 61.1
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 2.1e-50 203.0 209 53.1
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 2.7e-50 202.6 195 58.5
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 2.7e-50 202.6 194 57.2
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 3.5e-50 202.2 196 57.1
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 3.5e-50 202.2 167 61.1
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 4.6e-50 201.8 142 65.5
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 4.6e-50 201.8 192 56.8
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 6.0e-50 201.4 197 54.3
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 7.9e-50 201.1 135 66.7
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 7.9e-50 201.1 181 58.0
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 7.9e-50 201.1 197 56.9
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 7.9e-50 201.1 123 73.2
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 1.0e-49 200.7 196 56.1
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.7e-49 199.9 196 56.1
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 3.0e-49 199.1 195 53.3
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 3.0e-49 199.1 152 62.5
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 3.0e-49 199.1 165 60.6
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 3.0e-49 199.1 162 61.1
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 3.0e-49 199.1 136 65.4
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 8.7e-49 197.6 179 60.3
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.5e-48 196.8 200 54.5
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.5e-48 196.1 192 53.6
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.5e-48 196.1 192 53.6
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 9.6e-48 194.1 217 52.1
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 4.8e-47 191.8 196 57.1
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 8.1e-47 191.0 149 59.7
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.8e-46 189.9 115 82.6
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 9.0e-46 187.6 224 49.1
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 9.0e-46 187.6 192 52.1
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.2e-45 187.2 191 53.4
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 7.6e-45 184.5 111 75.7
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.4e-43 180.3 151 58.3
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 3.2e-43 179.1 140 57.9
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 4.2e-43 178.7 188 50.5
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 7.1e-43 177.9 217 48.8
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.6e-42 176.8 157 55.4
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 4.6e-42 175.3 116 69.0
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 7.9e-42 174.5 123 62.6
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 1.3e-41 173.7 116 70.7
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 1.1e-40 170.6 128 62.5
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 9.6e-40 167.5 112 67.9
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 6.2e-39 164.9 146 61.0
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 5.3e-38 161.8 112 60.7
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.2e-37 160.6 123 60.2
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 2.2e-36 156.4 91 76.9
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 1.1e-35 154.1 121 56.2
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 2.5e-35 152.9 153 56.9
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 9.3e-35 151.0 150 58.7
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.7e-34 149.4 122 59.8
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 1.3e-33 147.1 156 55.1
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 8.7e-33 144.4 162 52.5
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 5.7e-32 141.7 109 58.7
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 8.2e-31 137.9 112 55.4
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 8.2e-31 137.9 93 65.6
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 2.6e-29 132.9 89 65.2
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 4.2e-27 125.6 109 49.5
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 5.1e-25 118.6 73 69.9
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.1e-24 117.5 86 67.4
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 4.3e-24 115.5 116 48.3
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.6e-21 106.3 89 52.8
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.3e-20 104.0 128 41.4
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 3.6e-18 95.9 114 49.1
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 3.3e-16 89.4 151 43.7
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 6.3e-15 85.1 131 43.5
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.0e-12 77.8 132 40.9
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 2.2e-12 76.6 158 29.1
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 6.3e-07 58.5 44 56.8
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 4.1e-06 55.8 87 42.5


User provided reference genes

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