Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 1.3e-93 346.3 159 100.0
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 1.3e-93 346.3 159 100.0
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 4.7e-88 327.8 158 93.7
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 5.3e-84 314.3 159 92.5
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 1.5e-83 312.8 159 88.7
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 1.9e-81 305.8 159 86.2
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 5.5e-81 304.3 158 86.1
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 9.4e-81 303.5 154 87.7
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 2.7e-80 302.0 159 86.2
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 8.0e-80 300.4 154 87.0
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 1.0e-79 300.1 154 87.7
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 2.3e-79 298.9 158 84.2
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 2.4e-76 288.9 154 82.5
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 2.4e-76 288.9 170 78.2
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 2.0e-75 285.8 155 78.1
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 2.6e-75 285.4 155 80.6
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 5.9e-75 284.3 157 80.3
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 1.0e-74 283.5 157 79.6
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 1.7e-74 282.7 156 81.4
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 2.2e-74 282.3 157 79.0
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 3.8e-74 281.6 156 80.8
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 5.0e-74 281.2 157 80.3
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 6.5e-74 280.8 156 80.8
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 8.5e-74 280.4 155 80.0
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 1.1e-73 280.0 153 78.4
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 1.9e-73 279.3 152 80.3
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 2.5e-73 278.9 154 80.5
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 2.5e-73 278.9 153 79.1
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 2.5e-73 278.9 156 79.5
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 4.2e-73 278.1 153 80.4
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 5.5e-73 277.7 155 79.4
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 5.5e-73 277.7 155 79.4
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 7.2e-73 277.3 155 77.4
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 7.2e-73 277.3 153 79.7
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 9.4e-73 276.9 153 77.8
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 9.4e-73 276.9 153 77.8
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 9.4e-73 276.9 153 78.4
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 9.4e-73 276.9 153 77.8
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 9.4e-73 276.9 153 78.4
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 9.4e-73 276.9 153 77.8
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 9.4e-73 276.9 153 79.7
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 9.4e-73 276.9 152 79.6
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 9.4e-73 276.9 152 78.9
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 1.2e-72 276.6 153 79.1
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 1.2e-72 276.6 153 78.4
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 2.7e-72 275.4 150 78.7
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 3.6e-72 275.0 153 78.4
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 4.7e-72 274.6 152 80.3
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 6.1e-72 274.2 150 79.3
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 8.0e-72 273.9 153 77.8
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 8.0e-72 273.9 152 78.3
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 8.0e-72 273.9 155 76.1
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 1.0e-71 273.5 153 79.1
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 1.0e-71 273.5 155 77.4
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 1.4e-71 273.1 154 77.3
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 4.0e-71 271.6 155 77.4
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 4.0e-71 271.6 154 79.2
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 6.8e-71 270.8 153 78.4
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 6.8e-71 270.8 153 78.4
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 8.8e-71 270.4 153 78.4
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 1.5e-70 269.6 154 75.3
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 3.4e-70 268.5 154 77.9
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 5.7e-70 267.7 153 77.8
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 5.7e-70 267.7 153 77.8
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 5.7e-70 267.7 153 78.4
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 9.8e-70 266.9 153 77.8
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 9.8e-70 266.9 154 77.3
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.3e-69 266.5 155 75.5
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 1.3e-69 266.5 155 75.5
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 2.8e-69 265.4 157 75.2
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 3.7e-69 265.0 153 77.8
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 4.8e-69 264.6 148 78.4
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 6.3e-69 264.2 155 73.5
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 6.3e-69 264.2 155 74.8
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 8.3e-69 263.8 153 75.2
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 8.3e-69 263.8 157 75.8
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 1.1e-68 263.5 153 77.1
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 1.1e-68 263.5 154 76.0
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 1.4e-68 263.1 153 73.9
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 2.4e-68 262.3 157 72.0
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 2.4e-68 262.3 155 74.2
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 3.1e-68 261.9 130 88.5
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 5.4e-68 261.2 153 75.2
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 7.7e-67 257.3 153 74.5
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 1.7e-66 256.1 155 74.8
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 2.2e-66 255.8 153 73.2
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 2.2e-66 255.8 151 75.5
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 7.2e-65 250.8 153 73.9
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 2.1e-64 249.2 149 75.2
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 6.8e-63 244.2 164 66.5
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 6.8e-63 244.2 125 84.8
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 2.6e-62 242.3 162 70.4
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 2.6e-62 242.3 127 82.7
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 3.4e-62 241.9 122 86.1
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 5.7e-62 241.1 153 71.9
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 6.3e-61 237.7 162 69.1
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 2.0e-59 232.6 121 85.1
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 2.7e-59 232.3 153 67.3
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 3.5e-59 231.9 118 85.6
Haze_00616 Corylus avellana HOM05D006359 ORTHO05D007871 1.4e-55 219.9 154 68.2
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 8.9e-55 217.2 119 79.8
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 1.5e-54 216.5 106 92.5
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 3.2e-52 208.8 120 74.2
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 1.6e-51 206.5 128 70.3
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 2.7e-51 205.7 124 75.8
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 1.7e-50 203.0 114 78.9
Gorai.009G080000 Gossypium raimondii HOM05D006359 ORTHO05D007871 3.3e-49 198.7 153 62.7
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 3.3e-49 198.7 151 58.3
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 9.5e-49 197.2 117 78.6
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.6e-48 195.3 112 79.5
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 4.0e-47 191.8 156 57.1
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 8.9e-47 190.7 143 58.7
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 9.8e-46 187.2 94 86.2
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 8.6e-42 174.1 86 87.2
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 4.7e-40 168.3 100 74.0
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-39 166.8 156 50.0
Gohir.A05G075800 Gossypium hirsutum HOM05D006359 ORTHO05D007871 1.2e-38 163.7 153 54.2
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 1.5e-38 163.3 93 79.6
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 7.5e-38 161.0 104 64.4
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.7e-34 149.8 86 81.4
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 3.6e-32 142.1 82 79.3
Actinidia33791 Actinidia chinensis HOM05D006359 ORTHO05D007871 6.8e-23 111.3 80 61.2
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 2.7e-19 99.4 58 72.4
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 5.1e-18 95.1 156 33.3
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 2.5e-17 92.8 104 48.1
vmacro23522 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 7.3e-17 91.3 45 80.0
Haze_26508 Corylus avellana HOM05D006359 ORTHO05D007871 3.0e-10 69.3 83 49.4
PRCOL_00004481 Prasinoderma coloniale HOM05D006359 ORTHO05D007871 1.4e-07 60.5 124 34.7


User provided reference genes

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