Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7731 Trifolium pratense HOM05D000138 ORTHO05D000078 4.9e-87 324.7 199 100.0
Psat2g089880 Pisum sativum HOM05D000138 ORTHO05D000078 5.2e-44 181.8 215 64.2
Medtr5g031880 Medicago truncatula HOM05D000138 ORTHO05D000078 6.7e-44 181.4 201 57.7
Ca_22697_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 1.7e-31 140.2 175 57.1
Lj2g0027162 Lotus japonicus HOM05D000138 ORTHO05D000078 3.1e-25 119.4 208 44.7
arahy.Tifrunner.gnm1.ann1.N9BW0I Arachis hypogaea HOM05D000138 ORTHO05D000078 6.6e-23 111.7 211 42.7
arahy.Tifrunner.gnm1.ann1.RWA9J9 Arachis hypogaea HOM05D000138 ORTHO05D000078 6.6e-23 111.7 211 42.7
Glyma.09G199800 Glycine max HOM05D000138 ORTHO05D000078 1.1e-22 110.9 215 47.0
Phvul.002G146400 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 2.5e-22 109.8 199 44.2
Glyma.01G022500 Glycine max HOM05D000138 ORTHO05D000078 2.3e-20 103.2 202 45.5
Lalb_Chr16g0381611 Lupinus albus HOM05D000138 ORTHO05D000078 2.9e-18 96.3 216 39.8
Atru.chr3.1234 Acer truncatum HOM05D000138 ORTHO05D000078 3.7e-18 95.9 194 38.7
VMungo1215G0427 Vigna mungo HOM05D000138 ORTHO05D000078 1.4e-17 94.0 232 37.5
Lalb_Chr09g0325961 Lupinus albus HOM05D000138 ORTHO05D000078 9.2e-17 91.3 218 39.0
CANSAT01G1546 Cannabis sativa HOM05D000138 ORTHO05D000078 4.6e-16 89.0 213 37.6
FAN19G2755 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.0e-15 87.8 198 40.4
Manes.12G125500 Manihot esculenta HOM05D000138 ORTHO05D000078 1.0e-15 87.8 188 38.8
FAN26G3282 Fragaria x ananassa HOM05D000138 ORTHO05D000078 3.0e-15 86.3 192 41.1
QL06p035893 Quercus lobata HOM05D000138 ORTHO05D000078 5.0e-15 85.5 204 39.7
FvH4_1g19530 Fragaria vesca HOM05D000138 ORTHO05D000078 6.6e-15 85.1 197 40.1
Cpa.g.sc55.15 Carica papaya HOM05D000138 ORTHO05D000078 8.6e-15 84.7 211 35.5
FAN23G1042 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.5e-14 84.0 197 40.1
GSVIVG01004382001 Vitis vinifera HOM05D000138 ORTHO05D000078 1.9e-14 83.6 201 36.3
FAN28G0913 Fragaria x ananassa HOM05D000138 ORTHO05D000078 3.3e-14 82.8 197 38.6
Manes.13G100600 Manihot esculenta HOM05D000138 ORTHO05D000078 5.6e-14 82.0 194 36.6
Actinidia28819 Actinidia chinensis HOM05D000138 ORTHO05D000078 9.5e-14 81.3 191 37.2
COL.COLO4_27366 Corchorus olitorius HOM05D000138 ORTHO05D000078 9.5e-14 81.3 200 37.0
Oeu012262.1 Olea europaea HOM05D000138 ORTHO05D000078 9.5e-14 81.3 189 36.5
RcHm_v2.0_Chr2g0111031 Rosa chinensis HOM05D000138 ORTHO05D000078 1.6e-13 80.5 203 38.9
Thecc.01G089400 Theobroma cacao HOM05D000138 ORTHO05D000078 1.6e-13 80.5 193 36.8
Solyc11g010710.2 Solanum lycopersicum HOM05D000138 ORTHO05D000078 2.1e-13 80.1 207 35.7
Duzib147G0861 Durio zibethinus HOM05D000138 ORTHO05D000078 2.8e-13 79.7 193 37.8
Prupe.6G203000 Prunus persica HOM05D000138 ORTHO05D000078 2.8e-13 79.7 191 36.6
Psat6g123400 Pisum sativum HOM05D000138 ORTHO05D000078 3.6e-13 79.3 57 80.7
Ciclev10025339m.g Citrus clementina HOM05D000138 ORTHO05D000078 8.0e-13 78.2 208 36.5
CiPaw.07G046800 Carya illinoinensis HOM05D000138 ORTHO05D000078 1.4e-12 77.4 204 34.8
Peaxi162Scf00196g00322 Petunia axillaris HOM05D000138 ORTHO05D000078 1.4e-12 77.4 207 35.7
Haze_03884 Corylus avellana HOM05D000138 ORTHO05D000078 1.8e-12 77.0 199 35.2
BraA03t09803Z Brassica rapa HOM05D000138 ORTHO05D000078 2.3e-12 76.6 205 38.5
A03p04620 Brassica napus HOM05D000138 ORTHO05D000078 4.0e-12 75.9 206 38.3
Potri.007G011600 Populus trichocarpa HOM05D000138 ORTHO05D000078 4.0e-12 75.9 188 38.3
Sopen11g005510 Solanum pennellii HOM05D000138 ORTHO05D000078 4.0e-12 75.9 209 34.4
Duzib187G0129 Durio zibethinus HOM05D000138 ORTHO05D000078 6.8e-12 75.1 191 35.6
PGSC0003DMG400016197 Solanum tuberosum HOM05D000138 ORTHO05D000078 6.8e-12 75.1 213 34.7
C03p05290 Brassica napus HOM05D000138 ORTHO05D000078 1.2e-11 74.3 206 37.9
BolC3t13043H Brassica oleracea HOM05D000138 ORTHO05D000078 1.2e-11 74.3 206 37.9
MD15G1310900 Malus domestica HOM05D000138 ORTHO05D000078 1.5e-11 73.9 197 39.1
Aa31LG3G16640 Aethionema arabicum HOM05D000138 ORTHO05D000078 2.0e-11 73.6 207 36.2
Sp6g32920 Schrenkiella parvula HOM05D000138 ORTHO05D000078 3.4e-11 72.8 215 36.7
A10p27060 Brassica napus HOM05D000138 ORTHO05D000078 4.4e-11 72.4 212 36.3
BraA10t44758Z Brassica rapa HOM05D000138 ORTHO05D000078 4.4e-11 72.4 212 36.3
SHI21865 Sapria himalayana HOM05D000138 ORTHO05D000078 7.5e-11 71.6 196 34.7
CSS0016598 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 9.8e-11 71.2 194 35.1
CSS0040390 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 9.8e-11 71.2 194 35.1
Gohir.D03G035500 Gossypium hirsutum HOM05D000138 ORTHO05D000078 9.8e-11 71.2 186 34.4
Gorai.003G037100 Gossypium raimondii HOM05D000138 ORTHO05D000078 9.8e-11 71.2 190 34.7
Thhalv10013081m.g Eutrema salsugineum HOM05D000138 ORTHO05D000078 1.3e-10 70.9 209 36.8
Gohir.A02G145100 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.3e-10 70.9 190 34.7
Gohir.D10G099700 Gossypium hirsutum HOM05D000138 ORTHO05D000078 2.9e-10 69.7 207 33.8
Gorai.011G109500 Gossypium raimondii HOM05D000138 ORTHO05D000078 2.9e-10 69.7 207 33.8
Peaxi162Scf00085g02316 Petunia axillaris HOM05D000138 ORTHO05D000078 2.9e-10 69.7 200 38.0
Nitab4.5_0000128g0060 Nicotiana tabacum HOM05D000138 ORTHO05D000078 4.9e-10 68.9 180 38.9
BolC9t59456H Brassica oleracea HOM05D000138 ORTHO05D000078 6.4e-10 68.6 218 37.2
Cc07_g14010 Coffea canephora HOM05D000138 ORTHO05D000078 8.3e-10 68.2 182 37.9
Peaxi162Scf01142g00028 Petunia axillaris HOM05D000138 ORTHO05D000078 8.3e-10 68.2 196 33.7
BcaC03g13314 Brassica carinata HOM05D000138 ORTHO05D000078 1.1e-09 67.8 209 35.4
A02p00510 Brassica napus HOM05D000138 ORTHO05D000078 1.1e-09 67.8 209 35.4
C02p04500 Brassica napus HOM05D000138 ORTHO05D000078 1.1e-09 67.8 209 35.4
BolC2t06410H Brassica oleracea HOM05D000138 ORTHO05D000078 1.1e-09 67.8 209 35.4
BraA02t05035Z Brassica rapa HOM05D000138 ORTHO05D000078 1.1e-09 67.8 209 35.4
CARHR202780 Cardamine hirsuta HOM05D000138 ORTHO05D000078 1.1e-09 67.8 212 35.4
TWI53G0559 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 1.1e-09 67.8 196 35.2
C09p66750 Brassica napus HOM05D000138 ORTHO05D000078 1.9e-09 67.0 221 36.7
Dinv36942 Davidia involucrata HOM05D000138 ORTHO05D000078 1.9e-09 67.0 168 33.9
GSVIVG01002536001 Vitis vinifera HOM05D000138 ORTHO05D000078 3.2e-09 66.2 111 43.2
AT5G10510 Arabidopsis thaliana HOM05D000138 ORTHO05D000078 4.1e-09 65.9 209 34.4
Carub.0006s0899 Capsella rubella HOM05D000138 ORTHO05D000078 4.1e-09 65.9 218 34.9
Rhsim08G0017000 Rhododendron simsii HOM05D000138 ORTHO05D000078 4.1e-09 65.9 211 33.6
Gohir.A10G088200 Gossypium hirsutum HOM05D000138 ORTHO05D000078 5.4e-09 65.5 197 32.0
TWI74G0907 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 7.0e-09 65.1 206 34.0
THA.LOC104819288 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 9.2e-09 64.7 200 34.0
AL6G21030 Arabidopsis lyrata HOM05D000138 ORTHO05D000078 1.2e-08 64.3 212 35.8
BcaB08g37089 Brassica carinata HOM05D000138 ORTHO05D000078 2.0e-08 63.5 211 38.4
CSS0011550 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 2.0e-08 63.5 219 32.0
CSS0017294 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 2.0e-08 63.5 219 32.0
Oeu046551.3 Olea europaea HOM05D000138 ORTHO05D000078 2.0e-08 63.5 196 32.7
vmacro18551 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 2.0e-08 63.5 155 38.1
Actinidia24561 Actinidia chinensis HOM05D000138 ORTHO05D000078 3.5e-08 62.8 149 36.9
BcaB01g05523 Brassica carinata HOM05D000138 ORTHO05D000078 6.0e-08 62.0 205 34.1
CAN.G1344.22 Capsicum annuum HOM05D000138 ORTHO05D000078 6.0e-08 62.0 201 32.3
HanXRQChr14g0443001 Helianthus annuus HOM05D000138 ORTHO05D000078 6.0e-08 62.0 210 32.9
ClCG10G007780 Citrullus lanatus HOM05D000138 ORTHO05D000078 1.0e-07 61.2 168 35.7
Lsat_1_v5_gn_2_70201 Lactuca sativa HOM05D000138 ORTHO05D000078 1.0e-07 61.2 208 31.7
Hund16523 Selenicereus undatus HOM05D000138 ORTHO05D000078 1.3e-07 60.8 189 41.8
Eucgr.I00564 Eucalyptus grandis HOM05D000138 ORTHO05D000078 2.3e-07 60.1 189 43.9
Lsat_1_v5_gn_3_63001 Lactuca sativa HOM05D000138 ORTHO05D000078 3.0e-07 59.7 215 33.0
Sabra07G0009000 Salix brachista HOM05D000138 ORTHO05D000078 3.0e-07 59.7 190 35.3
BcaB05g21486 Brassica carinata HOM05D000138 ORTHO05D000078 3.9e-07 59.3 203 36.9
MD01G1040700 Malus domestica HOM05D000138 ORTHO05D000078 5.0e-07 58.9 207 38.2
SalBow5G1675 Salvia bowleyana HOM05D000138 ORTHO05D000078 6.6e-07 58.5 150 31.3
CiPaw.08G140800 Carya illinoinensis HOM05D000138 ORTHO05D000078 2.5e-06 56.6 211 30.8
Migut.H02287 Erythranthe guttata HOM05D000138 ORTHO05D000078 2.5e-06 56.6 162 46.3
Nitab4.5_0011938g0030 Nicotiana tabacum HOM05D000138 ORTHO05D000078 2.5e-06 56.6 100 46.0
Hund14083 Selenicereus undatus HOM05D000138 ORTHO05D000078 4.3e-06 55.8 200 35.0


User provided reference genes

Program Settings