Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 7.9e-79 297.0 143 100.0
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 2.9e-49 198.7 109 86.2
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 3.6e-47 191.8 111 83.8
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 8.8e-46 187.2 111 82.0
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 4.1e-43 178.3 113 77.0
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.2e-42 176.8 113 75.2
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.0e-41 173.7 122 70.5
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 4.7e-39 164.9 122 68.0
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 3.0e-38 162.2 124 64.5
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 4.4e-37 158.3 112 68.8
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 4.9e-36 154.8 108 70.4
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.8e-35 152.9 126 63.5
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 3.1e-35 152.1 120 65.8
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.6e-34 149.8 118 66.9
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.3e-33 146.0 118 66.9
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 6.6e-33 144.4 118 66.1
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 3.3e-32 142.1 135 57.0
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 5.6e-32 141.4 116 62.1
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 9.5e-32 140.6 135 56.3
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.2e-31 140.2 123 62.6
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 2.1e-31 139.4 120 60.0
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.8e-31 139.0 130 57.7
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 2.8e-31 139.0 114 62.3
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.6e-31 138.7 140 53.6
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 8.0e-31 137.5 115 62.6
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 1.0e-30 137.1 103 64.1
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.4e-30 136.7 116 62.9
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.4e-30 136.7 116 62.9
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.4e-30 136.7 116 62.9
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 1.8e-30 136.3 113 56.6
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 2.3e-30 136.0 118 58.5
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.0e-30 135.6 133 55.6
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 5.2e-30 134.8 133 54.1
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 6.8e-30 134.4 112 61.6
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.2e-29 133.7 115 61.7
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.5e-29 133.3 110 61.8
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.5e-29 133.3 111 63.1
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 3.4e-29 132.1 136 53.7
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.4e-29 131.7 132 53.8
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 7.5e-29 131.0 132 54.5
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 7.5e-29 131.0 114 57.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 9.8e-29 130.6 132 54.5
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.3e-28 130.2 114 57.0
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 1.3e-28 130.2 110 59.1
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 2.9e-28 129.0 121 57.0
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.9e-28 129.0 114 57.0
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 8.3e-28 127.5 128 53.9
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 1.4e-27 126.7 127 55.9
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.8e-27 126.3 135 51.9
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.8e-27 126.3 136 52.2
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 1.8e-27 126.3 125 52.8
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 1.8e-27 126.3 137 52.6
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 4.1e-27 125.2 136 49.3
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 7.0e-27 124.4 123 55.3
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 9.2e-27 124.0 113 51.3
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 1.2e-26 123.6 138 49.3
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.6e-26 123.2 126 52.4
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.6e-26 123.2 138 49.3
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 2.0e-26 122.9 120 56.7
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 2.7e-26 122.5 135 51.1
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.7e-26 122.5 119 53.8
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 3.5e-26 122.1 134 47.0
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 3.5e-26 122.1 120 55.0
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 4.6e-26 121.7 113 49.6
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 6.0e-26 121.3 113 54.9
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 7.8e-26 120.9 102 57.8
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.0e-25 120.6 138 48.6
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.3e-25 120.2 80 70.0
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.7e-25 119.8 105 53.3
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.7e-25 119.8 120 54.2
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.3e-25 119.4 111 52.3
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 3.0e-25 119.0 111 52.3
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 3.9e-25 118.6 121 56.2
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 6.6e-25 117.9 133 48.9
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 1.9e-24 116.3 115 51.3
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 1.9e-24 116.3 136 44.9
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 3.3e-24 115.5 106 51.9
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 4.3e-24 115.2 116 49.1
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 4.3e-24 115.2 134 46.3
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 5.6e-24 114.8 122 48.4
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 5.6e-24 114.8 134 47.8
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 9.5e-24 114.0 106 50.0
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.2e-23 113.6 139 46.0
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.2e-23 113.6 136 44.9
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 1.6e-23 113.2 114 47.4
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 1.6e-23 113.2 116 47.4
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 2.1e-23 112.8 63 84.1
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 2.8e-23 112.5 108 51.9
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 2.8e-23 112.5 108 51.9
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 4.7e-23 111.7 110 54.5
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 4.7e-23 111.7 120 45.8
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 4.7e-23 111.7 122 50.8
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 6.2e-23 111.3 107 57.9
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 1.1e-22 110.5 126 50.8
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.1e-22 110.5 123 48.8
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 2.0e-21 106.3 122 45.9
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 2.6e-21 105.9 126 44.4
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 5.4e-19 98.2 107 50.5
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 2.1e-18 96.3 120 40.8
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.9e-16 89.7 114 45.6
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 5.6e-16 88.2 131 38.9
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 7.3e-16 87.8 113 41.6
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.1e-15 86.3 105 46.7
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.1e-14 84.0 163 35.0
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 8.9e-14 80.9 63 57.1
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.7e-12 75.5 109 38.5
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 5.4e-11 71.6 143 33.6
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 9.2e-11 70.9 144 32.6
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 3.5e-10 68.9 185 30.8
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 3.0e-09 65.9 47 68.1
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 1.1e-08 63.9 47 66.0
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 4.7e-07 58.5 113 34.5


User provided reference genes

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