Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7653 Trifolium pratense HOM05D001780 ORTHO05D005322 1.6e-39 165.6 84 100.0
TPR.G13850 Trifolium pratense HOM05D001780 ORTHO05D005322 1.6e-31 139.0 74 94.6
Ca_01936_v3 Cicer arietinum L. HOM05D001780 ORTHO05D005322 6.4e-28 127.1 75 85.3
Medtr2g436760 Medicago truncatula HOM05D001780 ORTHO05D005322 8.6e-25 116.7 75 81.3
Psat1g153920 Pisum sativum HOM05D001780 ORTHO05D005322 1.2e-21 106.3 75 73.3
Glyma.17G026600 Glycine max HOM05D001780 ORTHO05D005322 2.6e-21 105.1 72 72.2
Lj6g0027734 Lotus japonicus HOM05D001780 ORTHO05D005322 5.8e-21 104.0 77 71.4
VMungo1215G2474 Vigna mungo HOM05D001780 ORTHO05D005322 3.7e-20 101.3 71 70.4
Lalb_Chr15g0083491 Lupinus albus HOM05D001780 ORTHO05D005322 8.3e-20 100.1 75 68.0
Phvul.003G105600 Phaseolus vulgaris HOM05D001780 ORTHO05D005322 3.2e-19 98.2 71 70.4
Cfa015386 Carpinus fangiana HOM05D001780 ORTHO05D005322 3.8e-12 74.7 74 56.8
arahy.Tifrunner.gnm1.ann1.A68CME Arachis hypogaea HOM05D001780 ORTHO05D005322 8.4e-12 73.6 68 58.8
arahy.Tifrunner.gnm1.ann1.I7AL06 Arachis hypogaea HOM05D001780 ORTHO05D005322 2.4e-11 72.0 68 57.4
MD13G1168400 Malus domestica HOM05D001780 ORTHO05D005322 4.1e-11 71.2 73 56.2
QL06p008943 Quercus lobata HOM05D001780 ORTHO05D005322 9.2e-11 70.1 75 50.7
RcHm_v2.0_Chr4g0422271 Rosa chinensis HOM05D001780 ORTHO05D005322 9.2e-11 70.1 73 54.8
MD16G1168800 Malus domestica HOM05D001780 ORTHO05D005322 1.6e-10 69.3 73 54.8
CiPaw.01G148500 Carya illinoinensis HOM05D001780 ORTHO05D005322 1.7e-09 65.9 74 51.4
Haze_01199 Corylus avellana HOM05D001780 ORTHO05D005322 1.7e-09 65.9 69 55.1
Ciclev10004211m.g Citrus clementina HOM05D001780 ORTHO05D005322 3.0e-09 65.1 73 53.4
PGR004G0386 Punica granatum HOM05D001780 ORTHO05D005322 1.1e-08 63.2 70 45.7
PGSC0003DMG400006289 Solanum tuberosum HOM05D001780 ORTHO05D005322 1.5e-08 62.8 74 47.3
TWI09G1280 Tripterygium wilfordii HOM05D001780 ORTHO05D005322 3.3e-08 61.6 73 53.4
Prupe.1G136500 Prunus persica HOM05D001780 ORTHO05D005322 4.3e-08 61.2 73 49.3
Peaxi162Scf00048g01820 Petunia axillaris HOM05D001780 ORTHO05D005322 5.6e-08 60.8 73 46.6
Solyc01g080810.3 Solanum lycopersicum HOM05D001780 ORTHO05D005322 7.3e-08 60.5 74 45.9
THA.LOC104818925 Tarenaya hassleriana HOM05D001780 ORTHO05D005322 7.3e-08 60.5 73 49.3
TAR383G0182 Trochodendron aralioides HOM05D001780 ORTHO05D005322 7.3e-08 60.5 72 47.2
CANSAT78G1960 Cannabis sativa HOM05D001780 ORTHO05D005322 9.6e-08 60.1 71 50.7
Thecc.02G218100 Theobroma cacao HOM05D001780 ORTHO05D005322 1.2e-07 59.7 73 46.6
Gorai.006G096300 Gossypium raimondii HOM05D001780 ORTHO05D005322 1.6e-07 59.3 74 45.9
GSVIVG01017762001 Vitis vinifera HOM05D001780 ORTHO05D005322 3.6e-07 58.2 74 47.3
Gohir.D09G080700 Gossypium hirsutum HOM05D001780 ORTHO05D005322 4.7e-07 57.8 74 45.9
Nitab4.5_0000700g0090 Nicotiana tabacum HOM05D001780 ORTHO05D005322 4.7e-07 57.8 74 44.6
TAR362G0169 Trochodendron aralioides HOM05D001780 ORTHO05D005322 4.7e-07 57.8 74 44.6
Carub.0008s0885 Capsella rubella HOM05D001780 ORTHO05D005322 8.1e-07 57.0 73 46.6
Cc03_g01890 Coffea canephora HOM05D001780 ORTHO05D005322 8.1e-07 57.0 76 46.1
AT5G49030 Arabidopsis thaliana HOM05D001780 ORTHO05D005322 1.1e-06 56.6 73 45.2
A06p38600 Brassica napus HOM05D001780 ORTHO05D005322 1.1e-06 56.6 73 46.6
BraA06t26775Z Brassica rapa HOM05D001780 ORTHO05D005322 1.1e-06 56.6 73 46.6
AL8G22410 Arabidopsis lyrata HOM05D001780 ORTHO05D005322 1.4e-06 56.2 73 45.2
AL8G22430 Arabidopsis lyrata HOM05D001780 ORTHO05D005322 1.4e-06 56.2 73 45.2
CARHR182680 Cardamine hirsuta HOM05D001780 ORTHO05D005322 1.8e-06 55.8 73 45.2
ClCG00G005040 Citrullus lanatus HOM05D001780 ORTHO05D005322 2.4e-06 55.5 74 50.0
ClCG05G006110 Citrullus lanatus HOM05D001780 ORTHO05D005322 2.4e-06 55.5 74 50.0
BolC7t44489H Brassica oleracea HOM05D001780 ORTHO05D005322 4.0e-06 54.7 73 45.2
Thhalv10003524m.g Eutrema salsugineum HOM05D001780 ORTHO05D005322 4.0e-06 54.7 73 45.2
FAN12G1911 Fragaria x ananassa HOM05D001780 ORTHO05D005322 4.0e-06 54.7 74 47.3
Manes.03G195400 Manihot esculenta HOM05D001780 ORTHO05D005322 4.0e-06 54.7 72 44.4
Sed0021413 Sechium edule HOM05D001780 ORTHO05D005322 4.0e-06 54.7 72 50.0
Duzib160G0626 Durio zibethinus HOM05D001780 ORTHO05D005322 5.2e-06 54.3 73 46.6
FAN12G3693 Fragaria x ananassa HOM05D001780 ORTHO05D005322 5.2e-06 54.3 74 47.3
Sp2g19410 Schrenkiella parvula HOM05D001780 ORTHO05D005322 9.0e-06 53.5 73 43.8
Sopen01g030670 Solanum pennellii HOM05D001780 ORTHO05D005322 9.0e-06 53.5 74 41.9


User provided reference genes

Program Settings