Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 2.4e-209 731.9 362 100.0
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 1.7e-186 656.0 362 90.1
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 1.9e-185 652.5 361 89.8
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.3e-173 613.2 364 85.4
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.9e-161 572.8 367 78.5
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 3.0e-151 538.9 368 74.5
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.7e-149 533.1 357 74.5
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 3.7e-149 531.9 367 73.6
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 3.7e-149 531.9 367 73.6
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.8e-148 529.6 357 74.2
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 9.1e-148 527.3 369 72.1
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 9.1e-148 527.3 369 72.1
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 3.8e-146 521.9 367 71.1
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.5e-145 520.0 356 74.4
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 4.2e-145 518.5 367 70.6
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 7.2e-145 517.7 367 70.3
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.6e-144 516.5 364 70.3
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 2.1e-144 516.2 368 70.7
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 3.6e-144 515.4 356 72.5
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 7.2e-137 491.1 362 68.2
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 6.1e-136 488.0 367 68.4
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 3.4e-134 482.3 361 67.3
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 5.7e-134 481.5 367 65.7
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 7.5e-134 481.1 365 66.8
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 7.5e-134 481.1 364 67.0
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 9.8e-134 480.7 365 66.6
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.7e-133 479.9 360 67.5
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.7e-133 479.9 366 65.6
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 3.7e-133 478.8 365 66.8
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 6.3e-133 478.0 365 65.2
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 8.3e-133 477.6 365 65.8
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 1.1e-132 477.2 365 67.4
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 1.8e-132 476.5 363 67.5
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 4.1e-132 475.3 365 66.3
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 5.4e-132 474.9 360 66.7
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 7.0e-132 474.6 361 65.4
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 1.6e-131 473.4 360 66.7
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 3.5e-131 472.2 360 66.9
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.3e-130 470.3 360 66.1
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.7e-130 469.9 365 63.8
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.1e-129 467.2 365 64.7
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.9e-129 466.5 363 66.1
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 5.6e-129 464.9 362 65.2
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.6e-128 463.4 367 64.3
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 2.1e-128 463.0 366 64.8
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 3.6e-128 462.2 354 66.4
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 4.7e-128 461.8 365 64.1
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.8e-127 459.9 354 65.5
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 8.9e-127 457.6 360 64.4
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.5e-126 456.8 362 64.6
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.6e-126 456.1 354 64.4
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 3.4e-126 455.7 341 68.0
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 9.8e-126 454.1 354 65.0
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.3e-125 453.8 364 63.7
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.3e-125 453.8 354 65.0
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.7e-125 453.4 354 65.3
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 2.2e-125 453.0 354 64.7
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 4.9e-125 451.8 359 63.2
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 6.4e-125 451.4 354 63.6
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.1e-124 450.7 355 65.4
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.4e-124 450.3 357 62.7
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 4.1e-124 448.7 342 65.5
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 5.4e-124 448.4 362 61.9
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.2e-123 447.2 354 64.1
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 1.6e-123 446.8 357 64.1
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.7e-123 446.0 360 63.6
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 4.6e-123 445.3 365 61.9
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.0e-122 444.1 357 63.0
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 6.6e-122 441.4 384 59.9
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.5e-121 440.3 360 61.4
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 1.5e-121 440.3 364 61.5
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.9e-121 439.9 360 61.7
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 2.5e-121 439.5 365 61.6
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 2.5e-121 439.5 355 61.4
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 7.3e-121 438.0 324 68.8
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 9.5e-121 437.6 358 61.5
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.2e-120 437.2 366 61.2
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.1e-120 436.4 354 62.7
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 2.8e-120 436.0 340 67.6
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 3.6e-120 435.6 380 59.5
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 4.7e-120 435.3 362 61.3
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 3.1e-119 432.6 365 60.8
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 8.9e-119 431.0 366 61.2
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.5e-118 430.3 365 62.5
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.0e-118 429.9 363 59.8
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.6e-118 429.5 336 65.5
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 4.4e-118 428.7 335 64.8
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.7e-117 426.8 370 60.5
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 2.2e-117 426.4 346 62.7
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 2.7e-115 419.5 442 53.6
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.3e-114 417.2 365 61.4
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 8.6e-114 414.5 354 58.2
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.1e-113 414.1 314 65.0
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.6e-112 410.2 361 57.1
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 2.8e-112 409.5 339 61.9
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 8.1e-112 407.9 360 56.4
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 4.4e-110 402.1 313 64.5
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 5.8e-110 401.7 299 66.9
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 9.2e-108 394.4 427 52.5
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.0e-106 391.0 406 52.5
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 7.3e-105 384.8 288 68.4
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.5e-102 377.1 358 54.7
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 3.8e-101 372.5 277 69.0
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 4.1e-100 369.0 275 70.5
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 2.1e-99 366.7 287 64.5
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.0e-98 362.8 363 54.0
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 5.2e-95 352.1 300 63.3
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 6.9e-95 351.7 308 56.8
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 9.0e-95 351.3 348 52.3
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.4e-84 317.4 359 47.4
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.2e-83 314.3 264 60.6
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 4.6e-83 312.4 328 53.4
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 3.0e-82 309.7 266 59.0
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 5.6e-81 305.4 259 59.1
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 8.4e-77 291.6 309 47.6
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.9e-65 253.8 445 35.3
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.6e-64 250.8 359 46.8
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-60 238.0 245 56.7
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-57 228.0 178 69.1
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-57 227.6 242 55.8
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-53 214.9 359 40.4
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 1.3e-53 214.5 357 38.9
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.5e-52 210.3 211 58.3
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 6.1e-51 205.7 182 63.7
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.8e-50 204.1 182 63.2
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 2.0e-46 190.7 243 49.4
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 5.9e-30 136.0 113 57.5
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 6.5e-21 105.9 200 39.5
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 4.2e-20 103.2 107 51.4
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 1.5e-12 78.2 219 27.4
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 2.5e-12 77.4 62 56.5
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 4.3e-12 76.6 62 56.5
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 5.6e-12 76.3 50 78.0
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.4e-07 60.8 88 40.9
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 6.0e-06 56.2 33 81.8


User provided reference genes

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