Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7592 Trifolium pratense HOM05D008053 ORTHO05D009808 2.6e-72 275.4 152 100.0
TPR.G7581 Trifolium pratense HOM05D008053 ORTHO05D009808 3.4e-27 125.6 152 52.0
Psat6g241800 Pisum sativum HOM05D008053 ORTHO05D009808 1.2e-11 73.9 112 41.1
Psat0s3483g0080 Pisum sativum HOM05D008053 ORTHO05D009808 2.6e-11 72.8 112 41.1
Psat6g240400 Pisum sativum HOM05D008053 ORTHO05D009808 1.7e-10 70.1 142 35.9
Ca_11393_v3 Cicer arietinum L. HOM05D008053 ORTHO05D009808 1.2e-08 63.9 52 55.8
Psat0s3483g0040 Pisum sativum HOM05D008053 ORTHO05D009808 1.2e-08 63.9 102 40.2
BcaB08g36385 Brassica carinata HOM05D008053 ORTHO05D009808 1.6e-08 63.5 43 60.5
BcaC04g19617 Brassica carinata HOM05D008053 ORTHO05D009808 1.6e-08 63.5 43 60.5
A10p18040 Brassica napus HOM05D008053 ORTHO05D009808 1.6e-08 63.5 43 60.5
C09p53590 Brassica napus HOM05D008053 ORTHO05D009808 1.6e-08 63.5 43 60.5
BolC9t58235H Brassica oleracea HOM05D008053 ORTHO05D009808 1.6e-08 63.5 43 60.5
BraA10t43878Z Brassica rapa HOM05D008053 ORTHO05D009808 1.6e-08 63.5 43 60.5
AL6G34120 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 4.6e-08 62.0 41 61.0
Carub.0006s2076 Capsella rubella HOM05D008053 ORTHO05D009808 4.6e-08 62.0 41 61.0
Thhalv10015522m.g Eutrema salsugineum HOM05D008053 ORTHO05D009808 4.6e-08 62.0 41 61.0
Sp6g22400 Schrenkiella parvula HOM05D008053 ORTHO05D009808 5.9e-08 61.6 41 58.5
AT5G22990 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 1.0e-07 60.8 41 58.5
CARHR039750 Cardamine hirsuta HOM05D008053 ORTHO05D009808 1.0e-07 60.8 41 61.0
CARHR109100 Cardamine hirsuta HOM05D008053 ORTHO05D009808 1.7e-07 60.1 41 63.4
BcaC06g36419 Brassica carinata HOM05D008053 ORTHO05D009808 2.3e-07 59.7 45 60.0
C07p04320 Brassica napus HOM05D008053 ORTHO05D009808 2.3e-07 59.7 45 60.0
BolC7t40826H Brassica oleracea HOM05D008053 ORTHO05D009808 2.3e-07 59.7 45 60.0
CARHR190540 Cardamine hirsuta HOM05D008053 ORTHO05D009808 2.3e-07 59.7 41 58.5
Medtr3g084720 Medicago truncatula HOM05D008053 ORTHO05D009808 2.3e-07 59.7 43 58.1
THA.LOC104811119 Tarenaya hassleriana HOM05D008053 ORTHO05D009808 3.0e-07 59.3 47 55.3
A07p02220 Brassica napus HOM05D008053 ORTHO05D009808 3.9e-07 58.9 45 60.0
BraA07t28016Z Brassica rapa HOM05D008053 ORTHO05D009808 3.9e-07 58.9 45 60.0
Phvul.007G004800 Phaseolus vulgaris HOM05D008053 ORTHO05D009808 3.9e-07 58.9 40 60.0
THA.LOC104799082 Tarenaya hassleriana HOM05D008053 ORTHO05D009808 3.9e-07 58.9 41 58.5
AT2G18490 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 6.6e-07 58.2 45 57.8
BcaC06g36418 Brassica carinata HOM05D008053 ORTHO05D009808 6.6e-07 58.2 45 55.6
BcaC06g36417 Brassica carinata HOM05D008053 ORTHO05D009808 8.6e-07 57.8 45 57.8
Ca_11392_v3 Cicer arietinum L. HOM05D008053 ORTHO05D009808 2.5e-06 56.2 40 62.5
Psat6g241760 Pisum sativum HOM05D008053 ORTHO05D009808 2.5e-06 56.2 87 40.2
AL8G18580 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 5.6e-06 55.1 45 53.3
AT2G15740 Arabidopsis thaliana HOM05D008053 ORTHO05D009808 5.6e-06 55.1 42 57.1
AL3G47500 Arabidopsis lyrata HOM05D008053 ORTHO05D009808 7.3e-06 54.7 41 58.5
BcaB03g16634 Brassica carinata HOM05D008053 ORTHO05D009808 9.5e-06 54.3 45 53.3
Carub.0003s2958 Capsella rubella HOM05D008053 ORTHO05D009808 9.5e-06 54.3 45 55.6
Sp3g31950 Schrenkiella parvula HOM05D008053 ORTHO05D009808 9.5e-06 54.3 35 62.9
VMungo0720G0435 Vigna mungo HOM05D008053 ORTHO05D009808 9.5e-06 54.3 40 55.0


User provided reference genes

Program Settings