Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7561 Trifolium pratense HOM05D000448 ORTHO05D000291 3.2e-60 235.0 124 100.0
Lj1g0011572 Lotus japonicus HOM05D000448 ORTHO05D000291 3.3e-41 171.8 118 75.4
Medtr7g099570 Medicago truncatula HOM05D000448 ORTHO05D000291 1.2e-35 153.3 110 71.8
TPR.G7562 Trifolium pratense HOM05D000448 ORTHO05D000291 2.6e-33 145.6 100 76.0
VMungo1383G2601 Vigna mungo HOM05D000448 ORTHO05D000291 2.8e-32 142.1 107 66.4
Medtr7g099600 Medicago truncatula HOM05D000448 ORTHO05D000291 6.3e-32 141.0 87 88.5
TPR.G7563 Trifolium pratense HOM05D000448 ORTHO05D000291 1.2e-27 126.7 106 62.3
Lalb_Chr25g0289651 Lupinus albus HOM05D000448 ORTHO05D000291 2.7e-27 125.6 100 63.0
arahy.Tifrunner.gnm1.ann1.FECP0X Arachis hypogaea HOM05D000448 ORTHO05D000291 3.6e-27 125.2 98 62.2
Lj1g0015920 Lotus japonicus HOM05D000448 ORTHO05D000291 3.6e-27 125.2 100 62.0
Glyma.03G170400 Glycine max HOM05D000448 ORTHO05D000291 1.4e-26 123.2 99 63.6
arahy.Tifrunner.gnm1.ann1.27XKAM Arachis hypogaea HOM05D000448 ORTHO05D000291 6.7e-26 120.9 100 58.0
arahy.Tifrunner.gnm1.ann1.9NB33V Arachis hypogaea HOM05D000448 ORTHO05D000291 1.1e-25 120.2 98 62.2
Psat3g049960 Pisum sativum HOM05D000448 ORTHO05D012127 2.6e-25 119.0 100 63.0
arahy.Tifrunner.gnm1.ann1.9J7SPP Arachis hypogaea HOM05D000448 ORTHO05D000291 1.6e-22 109.8 90 60.0
Medtr1g069110 Medicago truncatula HOM05D000448 ORTHO05D000291 4.0e-18 95.1 101 54.5
Glyma.13G130300 Glycine max HOM05D000448 ORTHO05D000291 2.4e-15 85.9 98 48.0
Cfa007125 Carpinus fangiana HOM05D000448 ORTHO05D000291 7.7e-14 80.9 97 42.3
Medtr7g099560 Medicago truncatula HOM05D000448 ORTHO05D000291 3.8e-13 78.6 76 53.9
Glyma.10G042950 Glycine max HOM05D000448 ORTHO05D000291 6.5e-13 77.8 98 45.9
Cfa013308 Carpinus fangiana HOM05D000448 ORTHO05D000291 1.2e-11 73.6 96 42.7
Prupe.3G142200 Prunus persica HOM05D000448 ORTHO05D000291 7.5e-09 64.3 98 41.8
MD12G1213300 Malus domestica HOM05D000448 ORTHO05D000291 9.8e-09 63.9 95 41.1
TAR383G0082 Trochodendron aralioides HOM05D000448 ORTHO05D000291 6.3e-08 61.2 100 37.0
COL.COLO4_00210 Corchorus olitorius HOM05D000448 ORTHO05D000291 1.1e-07 60.5 91 36.3
Prupe.3G155300 Prunus persica HOM05D000264 ORTHO05D000152 2.4e-07 59.3 101 34.7
CiPaw.03G111300 Carya illinoinensis HOM05D000448 ORTHO05D000291 3.1e-07 58.9 95 42.1
Prupe.3G154900 Prunus persica HOM05D000448 ORTHO05D000291 3.1e-07 58.9 100 41.0
FvH4_1g08140 Fragaria vesca HOM05D000448 ORTHO05D000291 4.1e-07 58.5 100 34.0
FAN19G2762 Fragaria x ananassa HOM05D000544 ORTHO05D000291 4.1e-07 58.5 100 34.0
Prupe.3G155100 Prunus persica HOM05D000448 ORTHO05D000291 4.1e-07 58.5 101 40.6
PGR142G3845 Punica granatum HOM05D000448 ORTHO05D000291 4.1e-07 58.5 99 36.4
FAN23G0378 Fragaria x ananassa HOM05D000544 ORTHO05D000291 5.4e-07 58.2 100 34.0
FAN28G0857 Fragaria x ananassa HOM05D000448 ORTHO05D000291 5.4e-07 58.2 100 34.0
MD12G1214700 Malus domestica HOM05D000448 ORTHO05D000291 5.4e-07 58.2 97 37.1
Rhsim05G0013100 Rhododendron simsii HOM05D000448 ORTHO05D000291 5.4e-07 58.2 110 36.4
VMungo1383G3639 Vigna mungo HOM05D000448 ORTHO05D000291 9.2e-07 57.4 95 35.8
CiPaw.04G072700 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.6e-06 56.6 111 36.9
Duzib192G1008 Durio zibethinus HOM05D000448 ORTHO05D000291 1.6e-06 56.6 88 39.8
MD15G1213100 Malus domestica HOM05D000448 ORTHO05D000291 1.6e-06 56.6 102 36.3
PGR142G2126 Punica granatum HOM05D000448 ORTHO05D000291 1.6e-06 56.6 94 36.2
QL02p061382 Quercus lobata HOM05D000448 ORTHO05D000291 1.6e-06 56.6 100 35.0
CiPaw.03G112400 Carya illinoinensis HOM05D000448 ORTHO05D000291 2.0e-06 56.2 94 39.4
Phvul.007G156400 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 2.0e-06 56.2 95 34.7
QL02p061270 Quercus lobata HOM05D000448 ORTHO05D000291 2.0e-06 56.2 107 32.7
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 2.0e-06 56.2 108 31.5
COL.COLO4_35168 Corchorus olitorius HOM05D000448 ORTHO05D000291 2.7e-06 55.8 91 40.7
Duzib192G0323 Durio zibethinus HOM05D000448 ORTHO05D000291 2.7e-06 55.8 90 40.0
FvH4_7g06270 Fragaria vesca HOM05D000448 ORTHO05D000291 2.7e-06 55.8 92 40.2
PGR142G0312 Punica granatum HOM05D000448 ORTHO05D000291 2.7e-06 55.8 93 36.6
CiPaw.03G112000 Carya illinoinensis HOM05D000448 ORTHO05D000291 3.5e-06 55.5 94 37.2
FAN10G3656 Fragaria x ananassa HOM05D000448 ORTHO05D000291 4.5e-06 55.1 93 41.9
Phvul.010G134000 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 4.5e-06 55.1 100 35.0
TAR626G0570 Trochodendron aralioides HOM05D000448 ORTHO05D000291 4.5e-06 55.1 95 33.7
Phvul.010G133700 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 5.9e-06 54.7 100 33.0
Phvul.010G133800 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 5.9e-06 54.7 98 34.7
QL02p061422 Quercus lobata HOM05D000448 ORTHO05D000291 5.9e-06 54.7 100 34.0
RcHm_v2.0_Chr1g0341001 Rosa chinensis HOM05D000448 ORTHO05D000291 5.9e-06 54.7 98 33.7
Actinidia25224 Actinidia chinensis HOM05D000448 ORTHO05D000291 7.7e-06 54.3 102 34.3
CANSAT11G0836 Cannabis sativa HOM05D000448 ORTHO05D000291 7.7e-06 54.3 100 29.0
CANSAT56G2866 Cannabis sativa HOM05D000448 ORTHO05D000291 7.7e-06 54.3 112 31.2


User provided reference genes

Program Settings