Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 3.7e-69 264.6 121 100.0
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 1.5e-62 242.7 120 90.0
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 3.5e-59 231.5 119 86.6
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 3.5e-59 231.5 119 86.6
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 4.5e-59 231.1 119 86.6
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 8.5e-58 226.9 119 84.9
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 5.2e-55 217.6 120 80.0
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.1e-52 209.9 116 75.9
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 4.1e-52 208.0 116 74.1
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 5.3e-52 207.6 117 74.4
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 9.1e-52 206.8 117 73.5
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.6e-51 206.1 118 74.6
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.0e-50 203.4 121 71.1
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 2.9e-50 201.8 119 70.6
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 2.9e-50 201.8 118 70.3
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 3.8e-50 201.4 118 72.9
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 3.8e-50 201.4 118 72.9
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 6.5e-50 200.7 118 70.3
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 8.5e-50 200.3 119 69.7
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.1e-49 199.9 116 70.7
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.1e-49 199.9 118 70.3
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.1e-49 199.9 118 70.3
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.5e-49 199.5 118 70.3
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.5e-49 198.7 155 61.3
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 7.2e-49 197.2 119 69.7
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 9.4e-49 196.8 154 61.0
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 9.4e-49 196.8 116 70.7
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 1.6e-48 196.1 119 68.9
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.6e-48 196.1 116 69.8
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 2.1e-48 195.7 117 69.2
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 2.1e-48 195.7 118 70.3
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 2.1e-48 195.7 118 68.6
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 2.1e-48 195.7 113 72.6
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 4.7e-48 194.5 118 67.8
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 4.7e-48 194.5 118 67.8
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 6.1e-48 194.1 119 64.7
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 8.0e-48 193.7 115 67.0
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 8.0e-48 193.7 118 68.6
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 8.0e-48 193.7 118 71.2
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.0e-47 193.4 118 70.3
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 1.0e-47 193.4 118 66.9
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 1.4e-47 193.0 119 64.7
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 1.8e-47 192.6 114 69.3
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.8e-47 192.6 117 66.7
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 1.8e-47 192.6 118 65.3
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.3e-47 192.2 118 66.1
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 3.0e-47 191.8 115 68.7
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 3.0e-47 191.8 118 66.9
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 4.0e-47 191.4 118 66.1
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 5.2e-47 191.0 120 66.7
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 5.2e-47 191.0 117 65.8
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 6.8e-47 190.7 120 66.7
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 6.8e-47 190.7 120 66.7
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 6.8e-47 190.7 120 67.5
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 6.8e-47 190.7 92 90.2
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 8.8e-47 190.3 120 65.8
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.2e-46 189.9 118 65.3
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-46 189.9 118 65.3
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-46 189.9 118 65.3
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.2e-46 189.9 118 65.3
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.0e-46 189.1 118 66.1
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.0e-46 189.1 118 66.1
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 3.4e-46 188.3 117 64.1
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 4.4e-46 188.0 115 67.0
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 7.5e-46 187.2 117 65.8
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 9.8e-46 186.8 115 65.2
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.3e-45 186.4 120 65.0
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.3e-45 186.4 120 66.7
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.3e-45 186.4 116 66.4
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.3e-45 186.4 118 68.6
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.7e-45 186.0 120 66.7
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 1.7e-45 186.0 115 69.6
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 2.8e-45 185.3 120 64.2
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 2.8e-45 185.3 115 67.8
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 2.4e-44 182.2 120 64.2
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.5e-43 178.3 113 66.4
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 3.5e-43 178.3 128 60.9
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 9.5e-41 170.2 96 71.9
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 3.6e-40 168.3 121 57.9
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 6.1e-40 167.5 118 59.3
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.4e-39 166.4 88 75.0
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 2.3e-39 165.6 120 60.8
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 3.0e-39 165.2 100 69.0
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 3.4e-38 161.8 115 53.9
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 8.3e-37 157.1 90 68.9
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 3.1e-36 155.2 88 67.0
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 9.2e-36 153.7 90 74.4
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 2.5e-33 145.6 99 60.6
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 3.6e-32 141.7 128 51.6
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 6.1e-32 141.0 99 59.6
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 1.0e-31 140.2 111 55.0
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 2.0e-30 136.0 126 50.0
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 2.9e-29 132.1 111 53.2
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.1e-28 130.2 86 64.0
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.6e-26 120.9 87 56.3
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 7.3e-25 117.5 60 75.0
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.1e-16 89.4 56 69.6
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 1.2e-11 73.6 117 35.9
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 1.0e-10 70.5 39 69.2
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.0e-10 70.5 43 72.1
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.2e-08 63.5 33 75.8


User provided reference genes

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