Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7497 Trifolium pratense HOM05D003781 ORTHO05D004299 5.9e-55 217.2 106 100.0
TPR.G38290 Trifolium pratense HOM05D010769 ORTHO05D011972 2.6e-26 122.1 65 92.3
TPR.G165 Trifolium pratense HOM05D003781 ORTHO05D004299 6.8e-19 97.4 53 90.6
TPR.G37223 Trifolium pratense HOM05D003781 ORTHO05D004299 1.7e-14 82.8 51 78.4
Medtr2g102470 Medicago truncatula HOM05D003781 ORTHO05D004299 3.3e-13 78.6 51 72.5
Psat5g299360 Pisum sativum HOM05D003781 ORTHO05D004299 5.6e-13 77.8 51 72.5
Medtr0036s0040 Medicago truncatula HOM05D003781 ORTHO05D004299 1.4e-11 73.2 51 66.7
Ca_03587_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 1.8e-11 72.8 51 64.7
Lj1g0015362 Lotus japonicus HOM05D003781 ORTHO05D004299 4.0e-11 71.6 53 62.3
Ca_17838_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 5.8e-10 67.8 51 66.7
Lalb_Chr18g0056351 Lupinus albus HOM05D003781 ORTHO05D004299 9.9e-10 67.0 50 62.0
CsaV3_3G037920 Cucumis sativus L. HOM05D003781 ORTHO05D004299 1.7e-09 66.2 53 58.5
MELO3C009536.2 Cucumis melo HOM05D003781 ORTHO05D004299 2.2e-09 65.9 53 58.5
ECA248G2654 Erigeron canadensis HOM05D003781 ORTHO05D004299 3.8e-09 65.1 52 59.6
VMungo0464G1804 Vigna mungo HOM05D003781 ORTHO05D004299 1.1e-08 63.5 46 63.0
arahy.Tifrunner.gnm1.ann1.WYX60D Arachis hypogaea HOM05D003781 ORTHO05D004299 1.4e-08 63.2 50 56.0
ClCG10G018370 Citrullus lanatus HOM05D003781 ORTHO05D004299 1.4e-08 63.2 53 56.6
Dinv31756 Davidia involucrata HOM05D003781 ORTHO05D004299 1.4e-08 63.2 52 57.7
Haze_19697 Corylus avellana HOM05D003781 ORTHO05D004299 1.9e-08 62.8 52 57.7
Dinv12337 Davidia involucrata HOM05D003781 ORTHO05D004299 3.2e-08 62.0 52 59.6
arahy.Tifrunner.gnm1.ann1.GQX3NW Arachis hypogaea HOM05D003781 ORTHO05D004299 5.4e-08 61.2 50 54.0
QL07p036815 Quercus lobata HOM05D003781 ORTHO05D004299 5.4e-08 61.2 52 55.8
Hma1.2p1_0381F.1_g140000 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 7.1e-08 60.8 49 55.1
Lsat_1_v5_gn_1_58161 Lactuca sativa HOM05D003781 ORTHO05D004299 9.2e-08 60.5 52 57.7
QL04p046781 Quercus lobata HOM05D003781 ORTHO05D004299 9.2e-08 60.5 52 55.8
HanXRQChr16g0532941 Helianthus annuus HOM05D003781 ORTHO05D004299 1.2e-07 60.1 61 52.5
QL04p047257 Quercus lobata HOM05D003781 ORTHO05D004299 1.2e-07 60.1 52 53.8
Sed0000357 Sechium edule HOM05D003781 ORTHO05D004299 1.2e-07 60.1 53 54.7
PGSC0003DMG400021351 Solanum tuberosum HOM05D003781 ORTHO05D004299 1.2e-07 60.1 49 63.3
Eucgr.K02618 Eucalyptus grandis HOM05D003781 ORTHO05D004299 1.6e-07 59.7 52 53.8
Cfa017313 Carpinus fangiana HOM05D003781 ORTHO05D004299 2.1e-07 59.3 50 56.0
Lsat_1_v5_gn_6_113040 Lactuca sativa HOM05D003781 ORTHO05D004299 2.1e-07 59.3 59 52.5
Peaxi162Scf00586g00012 Petunia axillaris HOM05D003781 ORTHO05D004299 2.1e-07 59.3 49 63.3
Thhalv10027115m.g Eutrema salsugineum HOM05D003781 ORTHO05D004299 2.7e-07 58.9 52 53.8
VMungo1383G2961 Vigna mungo HOM05D003781 ORTHO05D004299 2.7e-07 58.9 50 58.0
Phvul.001G195300 Phaseolus vulgaris HOM05D003781 ORTHO05D004299 3.5e-07 58.5 46 58.7
Solyc01g007160.4 Solanum lycopersicum HOM05D003781 ORTHO05D004299 3.5e-07 58.5 49 61.2
vmacro10320 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 3.5e-07 58.5 53 50.9
GSVIVG01029568001 Vitis vinifera HOM05D003781 ORTHO05D004299 3.5e-07 58.5 52 53.8
TWI74G1316 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 4.6e-07 58.2 65 46.2
BcaB03g12691 Brassica carinata HOM05D003781 ORTHO05D004299 6.0e-07 57.8 52 51.9
Haze_20190 Corylus avellana HOM05D003781 ORTHO05D004299 6.0e-07 57.8 46 60.9
Hma1.2p1_0064F.1_g034690 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 6.0e-07 57.8 64 46.9
Sc07g0006420 Simmondsia chinensis HOM05D003781 ORTHO05D004299 6.0e-07 57.8 57 49.1
Cc06_g06510 Coffea canephora HOM05D003781 ORTHO05D004299 7.8e-07 57.4 52 53.8
Duzib093G1220 Durio zibethinus HOM05D003781 ORTHO05D004299 7.8e-07 57.4 49 57.1
Lsat_1_v5_gn_1_27721 Lactuca sativa HOM05D003781 ORTHO05D004299 7.8e-07 57.4 40 62.5
Sopen01g003140 Solanum pennellii HOM05D003781 ORTHO05D004299 7.8e-07 57.4 49 61.2
Nitab4.5_0000020g0070 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.0e-06 57.0 49 59.2
Nitab4.5_0008187g0010 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.0e-06 57.0 49 59.2
Prupe.7G095100 Prunus persica HOM05D003781 ORTHO05D004299 1.0e-06 57.0 49 55.1
Cpa.g.sc10.172 Carica papaya HOM05D003781 ORTHO05D004299 1.3e-06 56.6 64 48.4
Nitab4.5_0001122g0140 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.3e-06 56.6 49 59.2
Migut.J00706 Erythranthe guttata HOM05D003781 ORTHO05D004299 1.7e-06 56.2 50 52.0
Solyc01g110330.3 Solanum lycopersicum HOM05D003781 ORTHO05D004299 1.7e-06 56.2 43 62.8
A03p60680 Brassica napus HOM05D003781 ORTHO05D004299 2.3e-06 55.8 53 50.9
CARHR239280 Cardamine hirsuta HOM05D003781 ORTHO05D004299 2.3e-06 55.8 52 51.9
GSVIVG01037869001 Vitis vinifera HOM05D003781 ORTHO05D004299 2.3e-06 55.8 52 57.7
SGA_v2.0_scaffold13G06629 Striga asiatica HOM05D003781 ORTHO05D004299 3.0e-06 55.5 50 52.0
MSTRG.5897 Avicennia marina HOM05D003781 ORTHO05D004299 3.9e-06 55.1 50 46.0
BcaNung04576 Brassica carinata HOM05D003781 ORTHO05D004299 3.9e-06 55.1 53 49.1
BraA03t15109Z Brassica rapa HOM05D003781 ORTHO05D004299 3.9e-06 55.1 53 49.1
CSS0048701 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 3.9e-06 55.1 49 49.0
Sopen01g052480 Solanum pennellii HOM05D003781 ORTHO05D004299 3.9e-06 55.1 43 60.5
THA.LOC104816619 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 3.9e-06 55.1 52 50.0
Aa31LG2G18950 Aethionema arabicum HOM05D003781 ORTHO05D004299 5.1e-06 54.7 57 43.9
Ciclev10012131m.g Citrus clementina HOM05D003781 ORTHO05D004299 5.1e-06 54.7 46 56.5
Sp7g29260 Schrenkiella parvula HOM05D003781 ORTHO05D004299 5.1e-06 54.7 52 48.1
TWI53G0607 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 5.1e-06 54.7 40 57.5
CSS0029856 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 6.6e-06 54.3 49 49.0
CAN.G170.93 Capsicum annuum HOM05D003781 ORTHO05D004299 6.6e-06 54.3 43 58.1
AL7G20660 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 8.6e-06 53.9 57 43.9
HanXRQChr01g0025751 Helianthus annuus HOM05D003781 ORTHO05D004299 8.6e-06 53.9 52 51.9
Nitab4.5_0002858g0040 Nicotiana tabacum HOM05D003781 ORTHO05D004299 8.6e-06 53.9 49 59.2


User provided reference genes

Program Settings