Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7490 Trifolium pratense HOM05D006530 ORTHO05D008283 1.5e-201 706.1 373 100.0
Psat5g104000 Pisum sativum HOM05D006530 ORTHO05D008283 7.4e-161 570.9 383 81.5
Ca_16350_v3 Cicer arietinum L. HOM05D006530 ORTHO05D008283 3.7e-160 568.5 375 80.3
Medtr3g082840 Medicago truncatula HOM05D006530 ORTHO05D008283 1.6e-155 553.1 374 80.2
Glyma.20G058500 Glycine max HOM05D006530 ORTHO05D008283 2.8e-128 462.6 390 66.4
Lj6g0023666 Lotus japonicus HOM05D006530 ORTHO05D008283 1.7e-125 453.4 377 67.4
arahy.Tifrunner.gnm1.ann1.B2HSRW Arachis hypogaea HOM05D006530 ORTHO05D008283 2.8e-123 446.0 379 66.2
arahy.Tifrunner.gnm1.ann1.KP8KK1 Arachis hypogaea HOM05D006530 ORTHO05D008283 3.6e-123 445.7 380 66.3
Phvul.006G013400 Phaseolus vulgaris HOM05D006530 ORTHO05D008283 6.8e-122 441.4 379 67.3
VMungo0540G0580 Vigna mungo HOM05D006530 ORTHO05D008283 1.3e-112 410.6 377 63.1
Lalb_Chr08g0236491 Lupinus albus HOM05D006530 ORTHO05D008283 2.9e-112 409.5 408 60.0
Cfa014298 Carpinus fangiana HOM05D006530 ORTHO05D008283 1.9e-100 370.2 424 51.9
Haze_12746 Corylus avellana HOM05D006530 ORTHO05D008283 5.2e-98 362.1 423 50.6
Hma1.2p1_0445F.1_g154110 Hydrangea macrophylla HOM05D006530 ORTHO05D008283 4.1e-95 352.4 403 50.4
QL08p029933 Quercus lobata HOM05D006530 ORTHO05D008283 1.2e-94 350.9 498 46.6
Cpa.g.sc132.47 Carica papaya HOM05D006530 ORTHO05D008283 1.6e-94 350.5 388 52.1
Ciclev10014523m.g Citrus clementina HOM05D006530 ORTHO05D008283 5.6e-92 342.0 452 47.1
Atru.chr6.3278 Acer truncatum HOM05D006530 ORTHO05D008283 1.2e-91 340.9 470 46.4
Atru.chr6.3294 Acer truncatum HOM05D006530 ORTHO05D008283 1.2e-91 340.9 470 46.4
TWI18G1412 Tripterygium wilfordii HOM05D006530 ORTHO05D008283 1.4e-90 337.4 437 48.3
Duzib133G1057 Durio zibethinus HOM05D006530 ORTHO05D008283 1.2e-86 324.3 456 44.5
Eucgr.K00730 Eucalyptus grandis HOM05D006530 ORTHO05D008283 1.6e-86 323.9 469 44.3
Gorai.001G218200 Gossypium raimondii HOM05D006530 ORTHO05D008283 3.5e-86 322.8 455 44.8
Gohir.A07G188400 Gossypium hirsutum HOM05D006530 ORTHO05D008283 6.0e-86 322.0 455 45.5
COL.COLO4_32787 Corchorus olitorius HOM05D006530 ORTHO05D008283 6.6e-85 318.5 453 45.0
Thecc.01G184900 Theobroma cacao HOM05D006530 ORTHO05D008283 8.7e-85 318.2 457 43.5
Rhsim06G0169800 Rhododendron simsii HOM05D006530 ORTHO05D008283 1.9e-84 317.0 444 46.8
DCAR_019250 Daucus carota HOM05D006530 ORTHO05D008283 5.6e-84 315.5 441 45.6
FvH4_6g41820 Fragaria vesca HOM05D006530 ORTHO05D008283 4.7e-83 312.4 453 45.9
FAN14G2540 Fragaria x ananassa HOM05D006530 ORTHO05D008283 8.1e-83 311.6 453 45.7
FAN09G3579 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.4e-82 310.1 455 45.3
Gohir.D07G195000 Gossypium hirsutum HOM05D006530 ORTHO05D008283 9.0e-82 308.1 455 43.5
GSVIVG01030533001 Vitis vinifera HOM05D006530 ORTHO05D008283 1.5e-81 307.4 439 46.9
Lj1A785T50 Lonicera japonica HOM05D006530 ORTHO05D008283 3.4e-81 306.2 440 46.4
CSS0049970 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 4.4e-81 305.8 469 44.6
Aqoxy1G02869 Aquilegia oxysepala HOM05D006530 ORTHO05D008283 5.8e-81 305.4 466 41.8
CSS0002282 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 1.7e-80 303.9 470 43.4
Aa31sc124G40 Aethionema arabicum HOM05D006530 ORTHO05D008283 8.4e-80 301.6 439 42.8
MD09G1117000 Malus domestica HOM05D006530 ORTHO05D008283 1.1e-79 301.2 441 45.1
MELO3C019717.2 Cucumis melo HOM05D006530 ORTHO05D008283 1.4e-79 300.8 475 40.8
Migut.H01255 Erythranthe guttata HOM05D006530 ORTHO05D008283 3.2e-79 299.7 388 47.2
Thhalv10003827m.g Eutrema salsugineum HOM05D006530 ORTHO05D008283 5.4e-79 298.9 398 44.7
Carub.0007s3142 Capsella rubella HOM05D006530 ORTHO05D008283 7.1e-79 298.5 422 43.6
RcHm_v2.0_Chr2g0157621 Rosa chinensis HOM05D006530 ORTHO05D008283 7.1e-79 298.5 459 42.3
AT5G35690 Arabidopsis thaliana HOM05D006530 ORTHO05D008283 9.3e-79 298.1 398 45.0
THA.LOC104808864 Tarenaya hassleriana HOM05D006530 ORTHO05D008283 4.6e-78 295.8 441 44.2
Sopen12g001950 Solanum pennellii HOM05D006530 ORTHO05D008283 7.8e-78 295.0 433 43.2
AL7G44540 Arabidopsis lyrata HOM05D006530 ORTHO05D008283 1.3e-77 294.3 392 46.2
PGSC0003DMG400013890 Solanum tuberosum HOM05D006530 ORTHO05D008283 1.3e-77 294.3 429 46.2
PSO541G4152 Papaver somniferum HOM05D006530 ORTHO05D008283 2.3e-77 293.5 448 43.3
Potri.014G160400 Populus trichocarpa HOM05D006530 ORTHO05D008283 6.6e-77 292.0 494 39.7
Cc05_g02470 Coffea canephora HOM05D006530 ORTHO05D008283 8.7e-77 291.6 413 45.0
CsaV3_6G015570 Cucumis sativus L. HOM05D006530 ORTHO05D008283 1.5e-76 290.8 481 39.7
BcaB06g26968 Brassica carinata HOM05D006530 ORTHO05D008283 1.9e-76 290.4 391 45.8
Nitab4.5_0000622g0140 Nicotiana tabacum HOM05D006530 ORTHO05D008283 2.5e-76 290.0 441 42.4
Prupe.3G206900 Prunus persica HOM05D006530 ORTHO05D008283 5.6e-76 288.9 493 41.2
TAR624G0329 Trochodendron aralioides HOM05D006530 ORTHO05D008283 7.3e-76 288.5 506 40.7
Sabra14G0122100 Salix brachista HOM05D006530 ORTHO05D008283 9.6e-76 288.1 514 38.1
A04p09880 Brassica napus HOM05D006530 ORTHO05D008283 2.1e-75 287.0 380 45.5
BraA04t16650Z Brassica rapa HOM05D006530 ORTHO05D008283 2.1e-75 287.0 380 45.5
Nn1g03345 Nelumbo nucifera HOM05D006530 ORTHO05D008283 2.1e-75 287.0 506 39.3
Solyc12g005980.2 Solanum lycopersicum HOM05D006530 ORTHO05D008283 3.6e-75 286.2 433 43.0
BcaC02g09488 Brassica carinata HOM05D006530 ORTHO05D008283 4.8e-75 285.8 404 43.6
PGR142G2443 Punica granatum HOM05D006530 ORTHO05D008283 6.2e-75 285.4 582 36.3
Sp7g06570 Schrenkiella parvula HOM05D006530 ORTHO05D008283 1.1e-74 284.6 393 45.3
Peaxi162Scf00047g02037 Petunia axillaris HOM05D006530 ORTHO05D008283 2.4e-74 283.5 439 42.4
MSTRG.14123 Avicennia marina HOM05D006530 ORTHO05D008283 5.3e-74 282.3 443 42.7
C04p43360 Brassica napus HOM05D006530 ORTHO05D008283 2.6e-73 280.0 383 45.2
BolC4t25914H Brassica oleracea HOM05D006530 ORTHO05D008283 3.4e-73 279.6 383 45.2
CARHR217000 Cardamine hirsuta HOM05D006530 ORTHO05D008283 4.5e-73 279.3 398 44.2
ECA236G0541 Erigeron canadensis HOM05D006530 ORTHO05D008283 7.6e-73 278.5 420 46.0
Zm00001eb034180 Zea mays HOM05D006530 ORTHO05D008283 2.9e-72 276.6 437 42.1
CAN.G931.8 Capsicum annuum HOM05D006530 ORTHO05D008283 3.8e-72 276.2 441 41.3
vmacro12144 Vaccinium macrocarpon HOM05D006530 ORTHO05D008283 5.4e-71 272.3 490 39.4
Manes.12G056700 Manihot esculenta HOM05D006530 ORTHO05D008283 3.5e-70 269.6 576 34.9
HanXRQChr16g0508331 Helianthus annuus HOM05D006530 ORTHO05D008283 7.9e-70 268.5 404 45.0
Os08g0500800 Oryza sativa ssp. japonica HOM05D006530 ORTHO05D008283 7.9e-70 268.5 457 41.4
Oeu061995.2 Olea europaea HOM05D006530 ORTHO05D008283 1.3e-69 267.7 429 42.0
AUR62015107 Chenopodium quinoa HOM05D006530 ORTHO05D008283 3.0e-69 266.5 456 40.8
CANSAT64G1714 Cannabis sativa HOM05D006530 ORTHO05D008283 8.7e-69 265.0 464 42.7
Actinidia09758 Actinidia chinensis HOM05D006530 ORTHO05D008283 3.3e-68 263.1 447 40.7
Nitab4.5_0005875g0040 Nicotiana tabacum HOM05D006530 ORTHO05D008283 4.3e-68 262.7 447 38.3
AUR62017570 Chenopodium quinoa HOM05D006530 ORTHO05D008283 5.6e-68 262.3 456 39.7
unitig_26.g9922 Utricularia gibba HOM05D006530 ORTHO05D008283 5.6e-68 262.3 375 45.3
SalBow3G0397 Salvia bowleyana HOM05D006530 ORTHO05D008283 9.6e-68 261.5 419 42.5
CiPaw.03G274100 Carya illinoinensis HOM05D006530 ORTHO05D008283 3.1e-66 256.5 363 46.0
Hund24188 Selenicereus undatus HOM05D006530 ORTHO05D008283 2.6e-65 253.4 468 37.4
HPP92_018405 Vanilla planifolia HOM05D006530 ORTHO05D008283 3.4e-65 253.1 413 43.1
EL10Ac9g22807 Beta vulgaris HOM05D006530 ORTHO05D008283 3.8e-64 249.6 476 37.8
SalBow1G8616 Salvia bowleyana HOM05D006530 ORTHO05D008283 3.5e-62 243.0 461 38.2
Dinv08706 Davidia involucrata HOM05D006530 ORTHO05D008283 1.1e-60 238.0 404 39.6
Sed0022132 Sechium edule HOM05D006530 ORTHO05D008283 2.8e-59 233.4 598 32.9
Lsat_1_v5_gn_7_94721 Lactuca sativa HOM05D006530 ORTHO05D008283 1.2e-57 228.0 380 42.6
ATR1128G020 Amborella trichopoda HOM05D006530 ORTHO05D008283 4.6e-54 216.1 558 31.9
CDE10G0969 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 1.4e-50 204.5 554 30.7
Pp3c20_8530 Physcomitrium patens HOM05D006530 ORTHO05D008283 5.0e-48 196.1 466 34.8
ClCG02G018190 Citrullus lanatus HOM05D006530 ORTHO05D008283 3.7e-43 179.9 406 34.5
FAN02G4367 Fragaria x ananassa HOM05D006530 ORTHO05D008283 3.7e-43 179.9 177 57.6
Sc20g0005070 Simmondsia chinensis HOM05D006530 ORTHO05D008283 2.6e-41 173.7 354 37.3
AagrBONN_evm.TU.Sc2ySwM_228.92 Anthoceros agrestis HOM05D006530 ORTHO05D008283 8.5e-40 168.7 496 33.3
SGA_v2.0_scaffold49G18363 Striga asiatica HOM05D006530 ORTHO05D008283 2.2e-35 154.1 210 46.2
SEGI_28144 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 4.5e-33 146.4 152 51.3
ATR1001G009 Amborella trichopoda HOM05D006530 ORTHO05D008283 4.2e-31 139.8 95 72.6
BcaB06g26965 Brassica carinata HOM05D006530 ORTHO05D008283 1.4e-29 134.8 288 36.8
SEGI_11846 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 2.6e-28 130.6 115 53.9
MD17G1108500 Malus domestica HOM05D006530 ORTHO05D008283 5.7e-28 129.4 241 37.8
CDE10G0956 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 9.7e-28 128.6 209 41.6
Mapoly0071s0087 Marchantia polymorpha HOM05D006530 ORTHO05D008283 7.0e-26 122.5 185 44.9
BcaB06g26964 Brassica carinata HOM05D006530 ORTHO05D008283 2.9e-16 90.5 76 59.2
MCO07G103 Micromonas commoda HOM05D006530 ORTHO05D008283 3.0e-13 80.5 87 48.3
Cre16.g684000 Chlamydomonas reinhardtii HOM05D006530 ORTHO05D008283 6.8e-13 79.3 68 55.9
SGA_v2.0_scaffold112G31585 Striga asiatica HOM05D006530 ORTHO05D008283 6.8e-13 79.3 96 46.9
Cfa025683 Carpinus fangiana HOM05D006530 ORTHO05D008283 5.7e-12 76.3 85 45.9
A03p41860 Brassica napus HOM05D003344 ORTHO05D003981 2.3e-08 64.3 97 41.2
MBI19_g29441_MAGBIO Magnolia biondii HOM05D006530 ORTHO05D008283 1.1e-07 62.0 129 33.3


User provided reference genes

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