Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 4.9e-61 237.7 123 100.0
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 2.6e-46 188.7 106 90.6
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 6.0e-43 177.6 104 88.5
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 6.0e-43 177.6 104 88.5
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 2.1e-40 169.1 99 88.9
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 9.3e-36 153.7 117 71.8
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 3.5e-35 151.8 101 78.2
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 6.0e-35 151.0 100 77.0
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 2.3e-34 149.1 117 70.9
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 2.3e-34 149.1 100 79.0
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 1.5e-33 146.4 100 79.0
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 4.3e-33 144.8 100 77.0
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 2.8e-32 142.1 101 70.3
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 8.2e-32 140.6 93 76.3
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 8.2e-32 140.6 100 70.0
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 1.1e-31 140.2 93 76.3
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.4e-31 139.8 99 68.7
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 1.8e-31 139.4 94 74.5
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 2.4e-31 139.0 94 74.5
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 6.9e-31 137.5 94 73.4
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 6.9e-31 137.5 93 75.3
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 9.0e-31 137.1 93 75.3
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 9.0e-31 137.1 94 71.3
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 1.2e-30 136.7 101 68.3
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.2e-30 136.7 101 67.3
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.2e-30 136.7 95 73.7
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 2.0e-30 136.0 94 72.3
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 3.4e-30 135.2 94 73.4
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.4e-30 135.2 94 73.4
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.4e-30 135.2 94 73.4
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.6e-30 134.0 95 72.6
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 7.6e-30 134.0 94 73.4
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 7.6e-30 134.0 94 73.4
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 1.3e-29 133.3 94 70.2
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 1.3e-29 133.3 95 68.4
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 2.2e-29 132.5 94 70.2
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 2.2e-29 132.5 94 71.3
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 2.9e-29 132.1 94 73.4
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 2.9e-29 132.1 94 72.3
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.8e-29 131.7 89 74.2
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 3.8e-29 131.7 94 70.2
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 3.8e-29 131.7 94 71.3
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 3.8e-29 131.7 104 67.3
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 3.8e-29 131.7 104 67.3
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 4.9e-29 131.3 94 73.4
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 8.4e-29 130.6 94 69.1
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 8.4e-29 130.6 101 64.4
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.1e-28 130.2 94 67.0
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 1.4e-28 129.8 94 66.0
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 1.9e-28 129.4 101 61.4
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 1.9e-28 129.4 101 62.4
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 1.9e-28 129.4 101 61.4
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.9e-28 129.4 101 62.4
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 2.5e-28 129.0 94 64.9
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 4.2e-28 128.3 101 62.4
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 4.2e-28 128.3 94 67.0
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.5e-28 127.9 101 64.4
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.5e-28 127.9 101 64.4
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 7.1e-28 127.5 101 60.4
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 7.1e-28 127.5 102 66.7
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 9.3e-28 127.1 94 68.1
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 2.1e-27 125.9 101 62.4
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 2.1e-27 125.9 96 66.7
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 2.7e-27 125.6 94 64.9
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 7.9e-27 124.0 103 63.1
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.3e-26 123.2 94 68.1
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 1.3e-26 123.2 102 62.7
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 3.9e-26 121.7 96 64.6
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 3.9e-26 121.7 94 64.9
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 3.9e-26 121.7 94 64.9
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 3.9e-26 121.7 94 63.8
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.1e-25 120.2 104 59.6
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 1.9e-25 119.4 96 62.5
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 2.5e-25 119.0 107 60.7
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 5.7e-25 117.9 101 61.4
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 5.7e-25 117.9 107 56.1
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 5.7e-25 117.9 107 57.9
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 7.4e-25 117.5 101 59.4
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 7.4e-25 117.5 101 59.4
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 7.4e-25 117.5 94 63.8
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 7.4e-25 117.5 90 63.3
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 7.4e-25 117.5 90 63.3
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 7.4e-25 117.5 90 63.3
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 2.8e-24 115.5 90 62.2
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 2.8e-24 115.5 94 60.6
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 3.7e-24 115.2 100 59.0
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 4.8e-24 114.8 90 62.2
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.1e-23 113.6 92 63.0
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.1e-23 113.6 90 64.4
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 1.1e-23 113.6 94 60.6
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 5.3e-23 111.3 95 57.9
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 6.9e-23 110.9 101 55.4
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 3.4e-22 108.6 101 52.5
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 7.6e-22 107.5 102 50.0
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.0e-21 107.1 114 50.9
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.9e-20 102.8 66 74.2
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 9.3e-20 100.5 92 56.5
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 2.1e-19 99.4 103 55.3
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.9e-18 95.1 67 70.1
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 3.9e-18 95.1 117 41.9
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.5e-17 92.4 95 49.5
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 2.5e-17 92.4 106 48.1
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 6.3e-16 87.8 139 38.1
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 4.1e-15 85.1 163 37.4
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 2.2e-13 79.3 54 70.4
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.6e-11 73.2 97 41.2
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.8e-10 69.7 105 39.0
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 2.3e-10 69.3 104 38.5
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 4.4e-09 65.1 50 62.0
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 8.2e-08 60.8 70 45.7
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 1.2e-06 57.0 89 39.3
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 3.4e-06 55.5 92 40.2


User provided reference genes

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