Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g120040 Pisum sativum HOM05D005347 ORTHO05D007838 1.6e-94 349.4 175 100.0
TPR.G7382 Trifolium pratense HOM05D005347 ORTHO05D030226 1.6e-94 349.4 175 100.0
Ca_26018_v3 Cicer arietinum L. HOM05D005347 ORTHO05D007838 1.8e-93 345.9 175 98.3
Phvul.007G252700 Phaseolus vulgaris HOM05D005347 ORTHO05D007838 6.9e-93 344.0 175 98.3
SalBow6G2907 Salvia bowleyana HOM05D005347 ORTHO05D007838 4.5e-92 341.3 175 97.1
arahy.Tifrunner.gnm1.ann1.RSU8B2 Arachis hypogaea HOM05D005347 ORTHO05D007838 5.8e-92 340.9 175 96.6
arahy.Tifrunner.gnm1.ann1.XR90DA Arachis hypogaea HOM05D005347 ORTHO05D007838 5.8e-92 340.9 175 96.6
Dinv12481 Davidia involucrata HOM05D005347 ORTHO05D007838 7.6e-92 340.5 175 96.6
Glyma.03G137000 Glycine max HOM05D005347 ORTHO05D007838 1.0e-91 340.1 175 96.6
VMungo1383G0107 Vigna mungo HOM05D005347 ORTHO05D007838 1.3e-91 339.7 175 96.6
Actinidia38547 Actinidia chinensis HOM05D005347 ORTHO05D007838 1.7e-91 339.3 175 96.0
Rhsim04G0102500 Rhododendron simsii HOM05D005347 ORTHO05D007838 1.7e-91 339.3 175 96.0
Glyma.19G139300 Glycine max HOM05D005347 ORTHO05D007838 2.2e-91 339.0 175 96.0
CSS0016317 Camellia sinensis var. sinensis HOM05D005347 ORTHO05D007838 2.9e-91 338.6 175 96.0
MBI17_g13973_MAGBIO Magnolia biondii HOM05D005347 ORTHO05D007838 2.9e-91 338.6 175 95.4
Actinidia17237 Actinidia chinensis HOM05D005347 ORTHO05D007838 3.8e-91 338.2 175 95.4
Cpa.g.sc92.51 Carica papaya HOM05D005347 ORTHO05D007838 5.0e-91 337.8 175 95.4
AUR62024447 Chenopodium quinoa HOM05D005347 ORTHO05D007838 5.0e-91 337.8 175 95.4
AUR62026037 Chenopodium quinoa HOM05D005347 ORTHO05D007838 5.0e-91 337.8 175 95.4
DCAR_013602 Daucus carota HOM05D005347 ORTHO05D007838 5.0e-91 337.8 175 95.4
Lalb_Chr25g0287111 Lupinus albus HOM05D005347 ORTHO05D007838 5.0e-91 337.8 173 95.4
MSTRG.10814 Avicennia marina HOM05D005347 ORTHO05D007838 6.5e-91 337.4 175 95.4
CAN.G676.69 Capsicum annuum HOM05D005347 ORTHO05D007838 6.5e-91 337.4 175 95.4
Glyma.10G097800 Glycine max HOM05D005347 ORTHO05D007838 6.5e-91 337.4 175 94.9
EL10Ac3g07089 Beta vulgaris HOM05D005347 ORTHO05D007838 8.4e-91 337.0 175 95.4
Migut.J01759 Erythranthe guttata HOM05D005347 ORTHO05D007838 8.4e-91 337.0 175 94.9
Phvul.001G132200 Phaseolus vulgaris HOM05D005347 ORTHO05D007838 8.4e-91 337.0 175 94.9
vmacro09075 Vaccinium macrocarpon HOM05D005347 ORTHO05D007838 8.4e-91 337.0 175 94.9
CsaV3_4G011730 Cucumis sativus L. HOM05D005347 ORTHO05D007838 1.1e-90 336.7 175 95.4
CDE05G2234 Ceratophyllum demersum HOM05D005347 ORTHO05D007838 1.4e-90 336.3 175 94.3
Peaxi162Scf00130g00022 Petunia axillaris HOM05D005347 ORTHO05D007838 1.4e-90 336.3 175 94.9
SGA_v2.0_scaffold105G30411 Striga asiatica HOM05D005347 ORTHO05D007838 1.4e-90 336.3 175 94.9
COL.COLO4_28282 Corchorus olitorius HOM05D005347 ORTHO05D007838 1.9e-90 335.9 175 94.9
Duzib093G0142 Durio zibethinus HOM05D005347 ORTHO05D007838 1.9e-90 335.9 175 94.9
MD12G1073700 Malus domestica HOM05D005347 ORTHO05D007838 1.9e-90 335.9 175 94.9
MD14G1072000 Malus domestica HOM05D005347 ORTHO05D007838 1.9e-90 335.9 175 94.9
GSVIVG01033277001 Vitis vinifera HOM05D005347 ORTHO05D007838 1.9e-90 335.9 174 94.8
MELO3C023131.2 Cucumis melo HOM05D005347 ORTHO05D007838 2.5e-90 335.5 175 94.9
Gohir.A09G122100 Gossypium hirsutum HOM05D005347 ORTHO05D007838 2.5e-90 335.5 175 94.3
Gohir.D09G118200 Gossypium hirsutum HOM05D005347 ORTHO05D007838 2.5e-90 335.5 175 94.3
Gorai.006G136500 Gossypium raimondii HOM05D005347 ORTHO05D007838 2.5e-90 335.5 175 94.3
Prupe.7G061100 Prunus persica HOM05D005347 ORTHO05D007838 2.5e-90 335.5 175 94.3
PGR004G1765 Punica granatum HOM05D005347 ORTHO05D007838 2.5e-90 335.5 175 94.9
Hund05283 Selenicereus undatus HOM05D005347 ORTHO05D007838 2.5e-90 335.5 175 94.9
Sed0003738 Sechium edule HOM05D005347 ORTHO05D007838 3.2e-90 335.1 175 94.9
Solyc04g015750.3 Solanum lycopersicum HOM05D005347 ORTHO05D007838 3.2e-90 335.1 175 94.3
Sopen04g007830 Solanum pennellii HOM05D005347 ORTHO05D007838 3.2e-90 335.1 175 94.3
PGSC0003DMG400027276 Solanum tuberosum HOM05D005347 ORTHO05D007838 3.2e-90 335.1 175 94.3
TAR369G0825 Trochodendron aralioides HOM05D005347 ORTHO05D007838 4.2e-90 334.7 174 94.3
ClCG04G000090 Citrullus lanatus HOM05D005347 ORTHO05D007838 5.5e-90 334.3 175 94.3
Ciclev10004154m.g Citrus clementina HOM05D005347 ORTHO05D007838 5.5e-90 334.3 175 93.7
Hma1.2p1_2002F.1_g310730 Hydrangea macrophylla HOM05D005347 ORTHO05D007838 5.5e-90 334.3 175 94.3
Hma1.2p1_2002F.1_g310740 Hydrangea macrophylla HOM05D005347 ORTHO05D007838 5.5e-90 334.3 175 94.3
Nn7g36281 Nelumbo nucifera HOM05D005347 ORTHO05D007838 5.5e-90 334.3 175 93.7
Cfa016819 Carpinus fangiana HOM05D005347 ORTHO05D007838 7.1e-90 334.0 175 93.7
Cc06_g17100 Coffea canephora HOM05D005347 ORTHO05D007838 7.1e-90 334.0 175 94.3
Lj1g0017211 Lotus japonicus HOM05D005347 ORTHO05D007838 7.1e-90 334.0 175 93.7
unitig_578.g15983 Utricularia gibba HOM05D005347 ORTHO05D007838 7.1e-90 334.0 175 94.3
Eucgr.A02348 Eucalyptus grandis HOM05D005347 ORTHO05D007838 9.3e-90 333.6 173 94.2
Lalb_Chr20g0110491 Lupinus albus HOM05D005347 ORTHO05D007838 9.3e-90 333.6 175 93.1
Manes.08G050600 Manihot esculenta HOM05D005347 ORTHO05D007838 9.3e-90 333.6 175 94.3
Sabra06G0035800 Salix brachista HOM05D005347 ORTHO05D007838 9.3e-90 333.6 175 93.7
TWI53G0247 Tripterygium wilfordii HOM05D005347 ORTHO05D007838 9.3e-90 333.6 175 93.7
Duzib128G0418 Durio zibethinus HOM05D005347 ORTHO05D007838 1.6e-89 332.8 175 93.7
Potri.006G051100 Populus trichocarpa HOM05D005347 ORTHO05D007838 2.1e-89 332.4 175 93.7
QL07p000318 Quercus lobata HOM05D005347 ORTHO05D007838 2.1e-89 332.4 174 93.1
Aqoxy2G00152 Aquilegia oxysepala HOM05D005347 ORTHO05D007838 4.6e-89 331.3 175 92.6
Lsat_1_v5_gn_9_29020 Lactuca sativa HOM05D005347 ORTHO05D007838 4.6e-89 331.3 175 93.1
Oeu017946.1 Olea europaea HOM05D005347 ORTHO05D007838 4.6e-89 331.3 173 94.8
TAR465G0003 Trochodendron aralioides HOM05D005347 ORTHO05D007838 4.6e-89 331.3 175 92.0
TAR623G1548 Trochodendron aralioides HOM05D005347 ORTHO05D007838 4.6e-89 331.3 175 92.0
ECA247G2461 Erigeron canadensis HOM05D005347 ORTHO05D007838 6.1e-89 330.9 175 93.7
Lsat_1_v5_gn_9_29121 Lactuca sativa HOM05D005347 ORTHO05D007838 6.1e-89 330.9 174 93.1
HanXRQChr10g0288781 Helianthus annuus HOM05D005347 ORTHO05D007838 7.9e-89 330.5 175 93.1
HanXRQChr10g0296641 Helianthus annuus HOM05D005347 ORTHO05D007838 7.9e-89 330.5 175 93.1
ATR0626G393 Amborella trichopoda HOM05D005347 ORTHO05D007838 1.0e-88 330.1 174 92.0
Aa31sc144G60 Aethionema arabicum HOM05D005347 ORTHO05D007838 1.8e-88 329.3 175 92.6
Dinv39601 Davidia involucrata HOM05D005347 ORTHO05D007838 2.3e-88 328.9 175 91.4
Oeu008920.1 Olea europaea HOM05D005347 ORTHO05D007838 3.0e-88 328.6 175 93.1
Nn2g15252 Nelumbo nucifera HOM05D005347 ORTHO05D007838 5.1e-88 327.8 175 91.4
PSO384G4351 Papaver somniferum HOM05D005347 ORTHO05D007838 5.1e-88 327.8 175 91.4
FvH4_6g23800 Fragaria vesca HOM05D005347 ORTHO05D007838 6.7e-88 327.4 175 92.0
FAN02G3940 Fragaria x ananassa HOM05D005347 ORTHO05D007838 6.7e-88 327.4 175 92.0
FAN14G0383 Fragaria x ananassa HOM05D005347 ORTHO05D007838 6.7e-88 327.4 175 92.0
Carub.0006s1179 Capsella rubella HOM05D005347 ORTHO05D007838 1.1e-87 326.6 175 91.4
FAN05G5756 Fragaria x ananassa HOM05D005347 ORTHO05D007838 1.1e-87 326.6 175 92.0
PSO339G0901 Papaver somniferum HOM05D005347 ORTHO05D007838 1.1e-87 326.6 175 90.9
RcHm_v2.0_Chr3g0482331 Rosa chinensis HOM05D005347 ORTHO05D007838 1.1e-87 326.6 175 91.4
Lju124A41T48 Lonicera japonica HOM05D005347 ORTHO05D007838 1.5e-87 326.2 184 89.7
SEGI_14472 Sequoiadendron giganteum HOM05D005347 ORTHO05D007838 1.5e-87 326.2 174 91.4
BcaB01g05345 Brassica carinata HOM05D005347 ORTHO05D007838 1.9e-87 325.9 175 90.9
A03p06120 Brassica napus HOM05D005347 ORTHO05D007838 1.9e-87 325.9 175 90.9
C03p07120 Brassica napus HOM05D005347 ORTHO05D007838 1.9e-87 325.9 175 90.9
BolC3t13211H Brassica oleracea HOM05D005347 ORTHO05D007838 1.9e-87 325.9 175 90.9
BraA03t09944Z Brassica rapa HOM05D005347 ORTHO05D007838 1.9e-87 325.9 175 90.9
HPP92_012089 Vanilla planifolia HOM05D005347 ORTHO05D007838 2.5e-87 325.5 175 90.3
Sp6g30390 Schrenkiella parvula HOM05D005347 ORTHO05D007838 3.3e-87 325.1 175 90.9
Atru.chr1.1096 Acer truncatum HOM05D005347 ORTHO05D007838 9.7e-87 323.6 175 90.3
AL6G24240 Arabidopsis lyrata HOM05D005347 ORTHO05D007838 2.2e-86 322.4 175 89.7
AT5G13630 Arabidopsis thaliana HOM05D005347 ORTHO05D007838 2.2e-86 322.4 175 89.7
Thhalv10012443m.g Eutrema salsugineum HOM05D005347 ORTHO05D007838 2.2e-86 322.4 175 89.7
CARHR199810 Cardamine hirsuta HOM05D005347 ORTHO05D007838 3.7e-86 321.6 175 89.7
Mapoly0008s0194 Marchantia polymorpha HOM05D005347 ORTHO05D007838 3.1e-85 318.5 175 88.0
Zm00001eb433610 Zea mays HOM05D005347 ORTHO05D007838 6.9e-85 317.4 175 88.6
SMO347G0130 Selaginella moellendorffii HOM05D005347 ORTHO05D007838 3.4e-84 315.1 174 88.5
AagrBONN_evm.TU.Sc2ySwM_368.2268 Anthoceros agrestis HOM05D005347 ORTHO05D007838 1.7e-83 312.8 175 86.9
CBR_g40549 Chara braunii HOM05D005347 ORTHO05D007838 1.7e-83 312.8 175 86.3
FAN09G2062 Fragaria x ananassa HOM05D005347 ORTHO05D007838 1.7e-83 312.8 202 79.7
Pp3c10_13960 Physcomitrium patens HOM05D005347 ORTHO05D007838 2.5e-82 308.9 175 85.7
Pp3c10_13970 Physcomitrium patens HOM05D005347 ORTHO05D007838 2.5e-82 308.9 175 85.7
Cre07.g325500 Chlamydomonas reinhardtii HOM05D005347 ORTHO05D007838 1.1e-77 293.5 173 80.3
MCO07G263 Micromonas commoda HOM05D005347 ORTHO05D007838 4.1e-77 291.6 175 79.4
Haze_19858 Corylus avellana HOM05D005347 ORTHO05D007838 2.9e-75 285.4 175 82.3
Ah.13g076460 Amaranthus hybridus HOM05D005347 ORTHO05D007838 5.3e-69 264.6 175 77.7
Os07g0656500 Oryza sativa ssp. japonica HOM05D005347 ORTHO05D007838 8.0e-65 250.8 146 85.6
TPR.G20810 Trifolium pratense HOM05D005347 ORTHO05D030226 2.3e-64 249.2 123 100.0
MCO07G355 Micromonas commoda HOM05D005347 ORTHO05D034305 1.2e-31 140.6 180 40.0
CBR_g6691 Chara braunii HOM05D005347 ORTHO05D034305 9.2e-29 131.0 174 37.9
Nn7g36276 Nelumbo nucifera HOM05D005347 ORTHO05D030226 2.7e-28 129.4 99 67.7
Pp3c5_16660 Physcomitrium patens HOM05D005347 ORTHO05D030226 1.0e-27 127.5 91 71.4
Cre11.g477625 Chlamydomonas reinhardtii HOM05D005347 ORTHO05D034305 1.4e-24 117.1 122 42.6
CiPaw.10G033300 Carya illinoinensis HOM05D005347 ORTHO05D007838 6.0e-20 101.7 51 96.1
Thecc.05G153600 Theobroma cacao HOM05D005347 ORTHO05D007838 6.0e-20 101.7 50 100.0
Sc04g0002790 Simmondsia chinensis HOM05D005347 ORTHO05D007838 5.1e-19 98.6 52 94.2
TPR.G10615 Trifolium pratense HOM05D005347 ORTHO05D007838 5.6e-18 95.1 98 58.2
FAN15G2164 Fragaria x ananassa HOM05D005347 ORTHO05D007838 1.8e-16 90.1 48 91.7
PRCOL_00001535 Prasinoderma coloniale HOM05D005347 ORTHO05D007838 3.3e-10 69.3 38 86.8


User provided reference genes

Program Settings