Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 6.7e-90 334.0 165 100.0
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 1.0e-45 187.2 153 67.3
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 2.3e-42 176.0 157 65.0
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 2.4e-39 166.0 139 61.9
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.0e-37 160.6 164 56.1
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 3.0e-37 159.1 167 55.7
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 1.9e-36 156.4 175 53.1
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 2.5e-36 156.0 94 75.5
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 3.3e-36 155.6 156 55.1
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 3.3e-36 155.6 151 55.0
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.6e-35 153.3 131 58.0
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 2.1e-35 152.9 136 57.4
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 2.1e-35 152.9 136 57.4
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 6.2e-35 151.4 129 58.1
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 6.2e-35 151.4 109 66.1
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 1.1e-34 150.6 143 54.5
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.1e-34 150.6 131 60.3
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.1e-34 150.6 131 57.3
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 1.1e-34 150.6 131 57.3
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 1.4e-34 150.2 133 56.4
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.4e-34 150.2 138 58.7
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 2.4e-34 149.4 93 68.8
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 2.4e-34 149.4 132 58.3
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 2.4e-34 149.4 90 73.3
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 3.1e-34 149.1 160 51.2
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 4.0e-34 148.7 167 50.9
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 4.0e-34 148.7 102 71.6
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 6.9e-34 147.9 133 56.4
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 6.9e-34 147.9 152 50.7
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 8.9e-34 147.5 160 52.5
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 8.9e-34 147.5 119 63.9
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.2e-33 147.1 104 64.4
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 1.5e-33 146.7 103 67.0
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.5e-33 146.7 141 56.0
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.5e-33 146.7 104 65.4
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 2.0e-33 146.4 143 54.5
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 2.0e-33 146.4 79 78.5
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 2.0e-33 146.4 96 69.8
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 2.0e-33 146.4 136 55.1
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 3.4e-33 145.6 149 53.7
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 5.8e-33 144.8 81 77.8
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 5.8e-33 144.8 145 54.5
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 7.6e-33 144.4 86 73.3
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 9.9e-33 144.1 86 75.6
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.3e-32 143.7 142 55.6
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.3e-32 143.7 121 55.4
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 2.2e-32 142.9 158 53.2
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 2.2e-32 142.9 130 56.9
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 2.9e-32 142.5 168 48.8
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.9e-32 142.5 142 54.9
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 3.8e-32 142.1 80 75.0
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 4.9e-32 141.7 156 51.9
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 4.9e-32 141.7 132 54.5
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 6.4e-32 141.4 133 56.4
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 6.4e-32 141.4 108 62.0
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 1.1e-31 140.6 77 76.6
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 1.4e-31 140.2 145 51.0
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.4e-31 140.2 160 48.1
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.9e-31 139.8 147 52.4
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.9e-31 139.8 82 73.2
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 2.4e-31 139.4 107 60.7
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 2.4e-31 139.4 82 74.4
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 4.2e-31 138.7 102 63.7
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 5.4e-31 138.3 153 47.7
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 5.4e-31 138.3 104 61.5
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 7.1e-31 137.9 161 49.1
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 9.3e-31 137.5 138 50.7
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 9.3e-31 137.5 108 62.0
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 9.3e-31 137.5 75 78.7
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 4.6e-30 135.2 142 50.0
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 6.0e-30 134.8 79 73.4
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 6.0e-30 134.8 81 70.4
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 3.9e-29 132.1 99 63.6
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 1.5e-28 130.2 72 75.0
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.5e-28 130.2 109 53.2
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 1.9e-28 129.8 72 75.0
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 4.3e-28 128.6 77 71.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 9.6e-28 127.5 164 47.6
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 2.1e-27 126.3 70 75.7
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 2.8e-27 125.9 140 49.3
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 6.9e-26 121.3 137 48.9
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.5e-25 120.2 65 78.5
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 2.0e-25 119.8 84 65.5
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 9.9e-25 117.5 128 50.0
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 1.3e-24 117.1 78 70.5
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 3.8e-24 115.5 66 75.8
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 3.8e-24 115.5 129 51.2
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 4.9e-24 115.2 71 71.8
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.4e-23 113.6 65 73.8
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 2.4e-23 112.8 146 50.7
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 2.4e-23 112.8 114 50.9
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 7.1e-23 111.3 113 51.3
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.6e-22 110.2 73 67.1
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 2.3e-21 106.3 72 56.9
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 1.5e-20 103.6 75 61.3
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 4.8e-19 98.6 65 66.2
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.1e-18 97.4 156 41.0
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 2.4e-18 96.3 117 54.7
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 5.3e-18 95.1 86 54.7
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 4.5e-17 92.0 63 57.1
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 7.1e-07 58.2 31 80.6


User provided reference genes

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