Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7308 Trifolium pratense HOM05D000627 ORTHO05D000365 2.5e-139 498.8 256 100.0
Medtr1g069155 Medicago truncatula HOM05D000627 ORTHO05D000365 3.3e-83 312.4 308 64.9
Ca_09623_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 2.5e-67 259.6 299 58.2
Psat6g064800 Pisum sativum HOM05D000627 ORTHO05D000365 2.6e-48 196.4 283 49.1
Phvul.007G156200 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 2.7e-45 186.4 286 49.3
Glyma.13G130100 Glycine max HOM05D000627 ORTHO05D000365 1.8e-41 173.7 249 49.0
Lalb_Chr21g0314221 Lupinus albus HOM05D000627 ORTHO05D000365 4.0e-41 172.6 293 48.1
VMungo0720G0926 Vigna mungo HOM05D000627 ORTHO05D000365 9.0e-41 171.4 253 52.6
Glyma.10G042800 Glycine max HOM05D000627 ORTHO05D000365 5.4e-38 162.2 272 45.6
Glyma.03G170300 Glycine max HOM05D000627 ORTHO05D000365 2.3e-28 130.2 261 43.7
Lj1g0006722 Lotus japonicus HOM05D000627 ORTHO05D000365 2.3e-28 130.2 323 40.9
Phvul.001G168700 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 3.0e-28 129.8 274 39.4
CiPaw.03G153100 Carya illinoinensis HOM05D000627 ORTHO05D000365 2.5e-27 126.7 318 36.8
Lj5g0009311 Lotus japonicus HOM05D000627 ORTHO05D000365 6.9e-25 118.6 183 48.1
Ca_08772_v3 Cicer arietinum L. HOM05D000627 ORTHO05D000365 9.0e-25 118.2 249 43.8
Haze_24752 Corylus avellana HOM05D000627 ORTHO05D000365 3.4e-24 116.3 312 36.5
Haze_24754 Corylus avellana HOM05D000627 ORTHO05D000365 3.4e-24 116.3 312 36.5
ClCG09G009390 Citrullus lanatus HOM05D000627 ORTHO05D000365 7.6e-24 115.2 302 40.1
Lj2A1136G51 Lonicera japonica HOM05D000627 ORTHO05D000365 1.0e-23 114.8 308 36.4
Sabra02G0192000 Salix brachista HOM05D000627 ORTHO05D000365 1.1e-22 111.3 313 39.6
Psat3g053840 Pisum sativum HOM05D000627 ORTHO05D000365 1.9e-22 110.5 235 42.6
Medtr7g099540 Medicago truncatula HOM05D000627 ORTHO05D000365 3.2e-22 109.8 268 41.0
Gohir.A07G154050 Gossypium hirsutum HOM05D000627 ORTHO05D000365 5.5e-22 109.0 329 37.4
Thecc.01G232500 Theobroma cacao HOM05D000627 ORTHO05D000365 5.5e-22 109.0 323 37.2
CsaV3_7G025510 Cucumis sativus L. HOM05D000627 ORTHO05D000365 7.1e-22 108.6 302 39.7
Actinidia23742 Actinidia chinensis HOM05D000627 ORTHO05D000365 1.2e-21 107.8 303 37.0
Cpa.g.sc8.199 Carica papaya HOM05D000627 ORTHO05D000365 1.2e-21 107.8 321 34.3
Duzib138G1278 Durio zibethinus HOM05D000627 ORTHO05D000365 1.2e-21 107.8 335 36.4
Manes.13G043000 Manihot esculenta HOM05D000627 ORTHO05D000365 1.6e-21 107.5 325 37.2
Potri.002G252800 Populus trichocarpa HOM05D000627 ORTHO05D000365 2.1e-21 107.1 320 38.1
VMungo1383G2379 Vigna mungo HOM05D000627 ORTHO05D000365 3.5e-21 106.3 230 40.4
Gohir.D07G160350 Gossypium hirsutum HOM05D000627 ORTHO05D000365 4.6e-21 105.9 326 37.4
Gorai.001G183400 Gossypium raimondii HOM05D000627 ORTHO05D000365 4.6e-21 105.9 326 37.4
Sed0002217 Sechium edule HOM05D000627 ORTHO05D000365 4.6e-21 105.9 281 39.9
Dinv43031 Davidia involucrata HOM05D000627 ORTHO05D000365 1.3e-20 104.4 288 36.1
CSS0000156 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 3.0e-20 103.2 313 36.1
Gohir.A07G201900 Gossypium hirsutum HOM05D000627 ORTHO05D000365 3.0e-20 103.2 322 35.1
Lalb_Chr01g0019351 Lupinus albus HOM05D000627 ORTHO05D000365 3.0e-20 103.2 304 36.5
Prupe.8G209100 Prunus persica HOM05D000627 ORTHO05D000365 5.1e-20 102.4 296 36.8
Gorai.007G151900 Gossypium raimondii HOM05D000627 ORTHO05D000365 6.7e-20 102.1 342 33.3
Dinv19237 Davidia involucrata HOM05D000627 ORTHO05D000365 1.5e-19 100.9 258 37.2
CANSAT01G2270 Cannabis sativa HOM05D000627 ORTHO05D000365 4.3e-19 99.4 308 34.1
CANSAT01G2597 Cannabis sativa HOM05D000627 ORTHO05D000365 4.3e-19 99.4 308 34.1
Atru.chr5.1930 Acer truncatum HOM05D000627 ORTHO05D000365 7.4e-19 98.6 259 37.8
Gohir.A11G135300 Gossypium hirsutum HOM05D000627 ORTHO05D000365 7.4e-19 98.6 342 33.6
TPR.G7566 Trifolium pratense HOM05D000627 ORTHO05D000365 1.6e-18 97.4 280 37.9
TWI23G1235 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 1.6e-18 97.4 319 34.8
Actinidia30102 Actinidia chinensis HOM05D000627 ORTHO05D000365 2.8e-18 96.7 305 37.0
Gorai.001G234900 Gossypium raimondii HOM05D000627 ORTHO05D000365 2.8e-18 96.7 331 33.8
Solyc09g063010.4 Solanum lycopersicum HOM05D000627 ORTHO05D000365 6.3e-18 95.5 288 35.4
Nn1g03096 Nelumbo nucifera HOM05D000627 ORTHO05D000365 1.4e-17 94.4 300 35.3
Ciclev10019585m.g Citrus clementina HOM05D000627 ORTHO05D000365 1.8e-17 94.0 320 35.0
Gohir.D07G208200 Gossypium hirsutum HOM05D000627 ORTHO05D000365 1.8e-17 94.0 336 33.9
Sopen09g025180 Solanum pennellii HOM05D000627 ORTHO05D000365 2.4e-17 93.6 289 35.6
Peaxi162Scf00052g01817 Petunia axillaris HOM05D000627 ORTHO05D000365 3.1e-17 93.2 329 32.5
CiPaw.04G108300 Carya illinoinensis HOM05D000627 ORTHO05D000365 5.3e-17 92.4 324 34.9
PGSC0003DMG400018950 Solanum tuberosum HOM05D000627 ORTHO05D000365 6.9e-17 92.0 286 36.4
TWI14G0020 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 6.9e-17 92.0 318 33.0
ClCG07G001610 Citrullus lanatus HOM05D000627 ORTHO05D000365 1.2e-16 91.3 303 34.3
Duzib133G0060 Durio zibethinus HOM05D000627 ORTHO05D000365 1.2e-16 91.3 297 35.0
TAR636G2769 Trochodendron aralioides HOM05D000627 ORTHO05D000365 1.2e-16 91.3 303 36.6
Rhsim13G0042000 Rhododendron simsii HOM05D000627 ORTHO05D000365 2.0e-16 90.5 284 35.9
Manes.12G044000 Manihot esculenta HOM05D000627 ORTHO05D000365 3.4e-16 89.7 280 35.7
TWI59G0312 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 3.4e-16 89.7 324 33.0
QL09p044299 Quercus lobata HOM05D000627 ORTHO05D000365 7.7e-16 88.6 271 33.2
TAR362G1325 Trochodendron aralioides HOM05D000627 ORTHO05D000365 7.7e-16 88.6 310 35.8
vmacro14770 Vaccinium macrocarpon HOM05D000627 ORTHO05D000365 2.2e-15 87.0 322 32.6
CsaV3_3G028610 Cucumis sativus L. HOM05D000627 ORTHO05D000365 6.5e-15 85.5 293 33.8
ECA247G1435 Erigeron canadensis HOM05D000627 ORTHO05D000365 6.5e-15 85.5 300 34.7
MBI07_g08928_MAGBIO Magnolia biondii HOM05D000627 ORTHO05D000365 8.5e-15 85.1 296 33.8
TAR365G0889 Trochodendron aralioides HOM05D000627 ORTHO05D000365 1.1e-14 84.7 302 34.8
Oeu052106.1 Olea europaea HOM05D000627 ORTHO05D000365 1.4e-14 84.3 268 35.1
MELO3C012808.2 Cucumis melo HOM05D000627 ORTHO05D000365 4.2e-14 82.8 299 32.1
Aqoxy2G03834 Aquilegia oxysepala HOM05D000627 ORTHO05D000365 1.2e-13 81.3 290 32.8
TAR633G1458 Trochodendron aralioides HOM05D000627 ORTHO05D000365 2.1e-13 80.5 299 34.8
HanXRQChr10g0280531 Helianthus annuus HOM05D000627 ORTHO05D000365 4.6e-13 79.3 316 33.2
Rhsim01G0258300 Rhododendron simsii HOM05D000627 ORTHO05D000365 1.0e-12 78.2 303 33.7
Gohir.D11G141500 Gossypium hirsutum HOM05D000627 ORTHO05D000365 1.8e-12 77.4 299 32.4
Sopen06g002870 Solanum pennellii HOM05D000627 ORTHO05D000365 3.0e-12 76.6 298 33.9
SalBow6G4067 Salvia bowleyana HOM05D000627 ORTHO05D000365 3.9e-12 76.3 223 35.9
Nitab4.5_0001511g0020 Nicotiana tabacum HOM05D000627 ORTHO05D000365 5.1e-12 75.9 336 30.1
MD10G1170600 Malus domestica HOM05D000627 ORTHO05D000365 6.7e-12 75.5 306 31.7
Solyc06g008030.3 Solanum lycopersicum HOM05D000627 ORTHO05D000365 6.7e-12 75.5 295 34.9
GSVIVG01028516001 Vitis vinifera HOM05D000627 ORTHO05D000365 8.8e-12 75.1 290 32.8
PGR044G1939 Punica granatum HOM05D000627 ORTHO05D000365 1.5e-11 74.3 260 33.5
Eucgr.K03592 Eucalyptus grandis HOM05D000627 ORTHO05D000365 2.0e-11 73.9 253 35.6
FvH4_2g19790 Fragaria vesca HOM05D000627 ORTHO05D000365 2.0e-11 73.9 229 33.2
MSTRG.12504 Avicennia marina HOM05D000627 ORTHO05D000365 2.5e-11 73.6 264 37.1
Lsat_1_v5_gn_9_11161 Lactuca sativa HOM05D000627 ORTHO05D000365 3.3e-11 73.2 306 31.7
Lalb_Chr25g0289671 Lupinus albus HOM05D000627 ORTHO05D000365 2.2e-10 70.5 265 35.5
PGSC0003DMG400014705 Solanum tuberosum HOM05D000627 ORTHO05D000365 2.2e-10 70.5 257 33.9
Lsat_1_v5_gn_5_179121 Lactuca sativa HOM05D000627 ORTHO05D000365 2.8e-10 70.1 289 32.9
Sed0005046 Sechium edule HOM05D000627 ORTHO05D000365 3.7e-10 69.7 251 33.5
Cc01_g17430 Coffea canephora HOM05D000627 ORTHO05D000365 8.2e-10 68.6 331 30.2
FAN15G0159 Fragaria x ananassa HOM05D000627 ORTHO05D000365 1.4e-09 67.8 224 30.8
Sp3g33420 Schrenkiella parvula HOM05D000627 ORTHO05D000365 3.1e-09 66.6 142 35.9
FAN27G3071 Fragaria x ananassa HOM05D000627 ORTHO05D000365 4.1e-09 66.2 230 29.6
CSS0039386 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 7.7e-08 62.0 261 33.0
RcHm_v2.0_Chr6g0285491 Rosa chinensis HOM05D000627 ORTHO05D000365 7.7e-08 62.0 252 32.5
Thhalv10001974m.g Eutrema salsugineum HOM05D000627 ORTHO05D000365 1.7e-07 60.8 297 29.6
Nn3g19874 Nelumbo nucifera HOM05D000627 ORTHO05D000365 1.7e-07 60.8 292 28.8
Nitab4.5_0001740g0080 Nicotiana tabacum HOM05D000627 ORTHO05D000365 1.7e-07 60.8 199 30.7
Peaxi162Scf00499g00414 Petunia axillaris HOM05D000627 ORTHO05D000365 2.2e-07 60.5 228 31.6
Aa31LG8G17110 Aethionema arabicum HOM05D000627 ORTHO05D000365 3.8e-07 59.7 111 36.0
Potri.002G055400 Populus trichocarpa HOM05D000627 ORTHO05D000365 5.0e-07 59.3 101 38.6
Nitab4.5_0003180g0060 Nicotiana tabacum HOM05D000627 ORTHO05D000365 8.5e-07 58.5 266 29.7
THA.LOC104814712 Tarenaya hassleriana HOM05D000627 ORTHO05D000365 8.5e-07 58.5 136 39.0
ATR0787G162 Amborella trichopoda HOM05D000627 ORTHO05D000365 1.1e-06 58.2 280 31.8
Hma1.2p1_1393F.1_g280200 Hydrangea macrophylla HOM05D000627 ORTHO05D000365 1.9e-06 57.4 263 32.3
PSO541G0766 Papaver somniferum HOM05D000627 ORTHO05D000365 2.5e-06 57.0 101 38.6
CDE02G3267 Ceratophyllum demersum HOM05D000627 ORTHO05D000365 7.2e-06 55.5 113 35.4
MD05G1182300 Malus domestica HOM05D000627 ORTHO05D000365 7.2e-06 55.5 309 30.7
Sc17g0002460 Simmondsia chinensis HOM05D000627 ORTHO05D000365 7.2e-06 55.5 187 32.1


User provided reference genes

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