Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G726 Trifolium pratense HOM05D000823 ORTHO05D000088 9.8e-42 172.9 81 100.0
TPR.G15757 Trifolium pratense HOM05D000823 ORTHO05D000088 7.3e-29 130.2 83 79.5
TPR.G15766 Trifolium pratense HOM05D000823 ORTHO05D000088 7.5e-18 93.6 62 72.6
Psat6g011480 Pisum sativum HOM05D000823 ORTHO05D000088 2.2e-17 92.0 71 67.6
Psat2g024080 Pisum sativum HOM05D000823 ORTHO05D000088 4.9e-17 90.9 69 66.7
Ca_13317_v3 Cicer arietinum L. HOM05D000823 ORTHO05D000088 6.4e-17 90.5 61 70.5
Lj5g0027331 Lotus japonicus HOM05D000823 ORTHO05D000088 8.3e-17 90.1 62 66.1
TPR.G13699 Trifolium pratense HOM05D000823 ORTHO05D000088 8.3e-17 90.1 67 67.2
Medtr1g021270 Medicago truncatula HOM05D000823 ORTHO05D000088 2.4e-16 88.6 67 68.7
Lalb_Chr22g0355281 Lupinus albus HOM05D000823 ORTHO05D000088 4.1e-16 87.8 62 66.1
Glyma.14G079200 Glycine max HOM05D000823 ORTHO05D000088 2.7e-15 85.1 62 61.3
Glyma.17G245900 Glycine max HOM05D000823 ORTHO05D000088 1.7e-14 82.4 62 61.3
CiPaw.15G066400 Carya illinoinensis HOM05D000823 ORTHO05D000088 1.5e-13 79.3 68 54.4
TPR.G13675 Trifolium pratense HOM05D000823 ORTHO05D000088 1.9e-13 79.0 67 56.7
Medtr1g021295 Medicago truncatula HOM05D000823 ORTHO05D000088 2.5e-13 78.6 49 73.5
TPR.G34489 Trifolium pratense HOM05D000823 ORTHO05D000088 4.3e-13 77.8 48 72.9
Medtr1g021320 Medicago truncatula HOM05D000823 ORTHO05D000088 5.6e-13 77.4 70 58.6
Cfa018483 Carpinus fangiana HOM05D000823 ORTHO05D000088 7.3e-13 77.0 62 58.1
VMungo0647G0862 Vigna mungo HOM05D000823 ORTHO05D000088 7.3e-13 77.0 49 67.3
QL02p006444 Quercus lobata HOM05D000823 ORTHO05D000088 2.1e-12 75.5 64 54.7
GSVIVG01009586001 Vitis vinifera HOM05D000823 ORTHO05D000088 3.6e-12 74.7 54 57.4
Phvul.001G018500 Phaseolus vulgaris HOM05D000823 ORTHO05D000088 6.2e-12 73.9 51 62.7
Medtr1g021360 Medicago truncatula HOM05D000823 ORTHO05D000088 8.1e-12 73.6 46 69.6
Medtr1g021440 Medicago truncatula HOM05D000823 ORTHO05D000088 1.8e-11 72.4 58 56.9
MSTRG.1316 Avicennia marina HOM05D000823 ORTHO05D000088 2.3e-11 72.0 52 59.6
Potri.014G036800 Populus trichocarpa HOM05D000823 ORTHO05D000088 3.1e-11 71.6 55 56.4
Medtr1g021350 Medicago truncatula HOM05D000823 ORTHO05D000088 4.0e-11 71.2 49 67.3
arahy.Tifrunner.gnm1.ann1.8D6Z2X Arachis hypogaea HOM05D000823 ORTHO05D000088 5.2e-11 70.9 62 59.7
arahy.Tifrunner.gnm1.ann1.NFB9X0 Arachis hypogaea HOM05D000823 ORTHO05D000088 5.2e-11 70.9 62 59.7
Medtr1g021330 Medicago truncatula HOM05D000823 ORTHO05D000088 8.9e-11 70.1 47 66.0
CANSAT25G0071 Cannabis sativa HOM05D000823 ORTHO05D000088 1.2e-10 69.7 47 63.8
Cc10_g03680 Coffea canephora HOM05D000823 ORTHO05D000088 1.2e-10 69.7 51 58.8
Manes.05G168900 Manihot esculenta HOM05D000823 ORTHO05D000088 1.2e-10 69.7 51 62.7
Actinidia38035 Actinidia chinensis HOM05D000823 ORTHO05D000088 1.5e-10 69.3 55 54.5
Hma1.2p1_0260F.1_g104520 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 2.0e-10 68.9 51 58.8
SalBow7G0768 Salvia bowleyana HOM05D000823 ORTHO05D000088 2.0e-10 68.9 60 48.3
Duzib093G1908 Durio zibethinus HOM05D000823 ORTHO05D000088 2.6e-10 68.6 53 54.7
Hma1.2p1_0023F.1_g015270 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 2.6e-10 68.6 51 58.8
SGA_v2.0_scaffold82G26218 Striga asiatica HOM05D000823 ORTHO05D000088 2.6e-10 68.6 60 46.7
Sabra14G0026500 Salix brachista HOM05D000823 ORTHO05D000088 3.4e-10 68.2 55 52.7
arahy.Tifrunner.gnm1.ann1.00BQAA Arachis hypogaea HOM05D000823 ORTHO05D000088 4.4e-10 67.8 64 54.7
Dinv39357 Davidia involucrata HOM05D000823 ORTHO05D000088 5.8e-10 67.4 58 50.0
COL.COLO4_26426 Corchorus olitorius HOM05D000823 ORTHO05D000088 7.5e-10 67.0 53 50.9
Nitab4.5_0000068g0140 Nicotiana tabacum HOM05D000823 ORTHO05D000088 9.9e-10 66.6 63 44.4
MELO3C018249.2 Cucumis melo HOM05D000823 ORTHO05D000088 1.3e-09 66.2 46 58.7
HanXRQChr04g0104181 Helianthus annuus HOM05D000823 ORTHO05D000088 1.3e-09 66.2 53 52.8
Rhsim07G0234100 Rhododendron simsii HOM05D000823 ORTHO05D000088 1.3e-09 66.2 50 58.0
Sopen04g033170 Solanum pennellii HOM05D000823 ORTHO05D000088 1.3e-09 66.2 52 53.8
Ciclev10000881m.g Citrus clementina HOM05D000823 ORTHO05D000088 1.7e-09 65.9 51 56.9
Eucgr.F02399 Eucalyptus grandis HOM05D000823 ORTHO05D000088 1.7e-09 65.9 63 52.4
Gorai.005G105400 Gossypium raimondii HOM05D000823 ORTHO05D000088 1.7e-09 65.9 54 51.9
Solyc04g079590.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 1.7e-09 65.9 52 51.9
Peaxi162Scf01514g00024 Petunia axillaris HOM05D000823 ORTHO05D000088 2.2e-09 65.5 52 51.9
Ah.11g043200 Amaranthus hybridus HOM05D000823 ORTHO05D000088 2.9e-09 65.1 47 55.3
Oeu006163.1 Olea europaea HOM05D000823 ORTHO05D000088 2.9e-09 65.1 52 51.9
THA.LOC104803403 Tarenaya hassleriana HOM05D000823 ORTHO05D000088 2.9e-09 65.1 58 53.4
FvH4_2g40640 Fragaria vesca HOM05D000823 ORTHO05D000088 3.7e-09 64.7 47 55.3
MD15G1034200 Malus domestica HOM05D000823 ORTHO05D000088 3.7e-09 64.7 45 60.0
Nitab4.5_0002280g0040 Nicotiana tabacum HOM05D000823 ORTHO05D000088 3.7e-09 64.7 52 50.0
vmacro04480 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 3.7e-09 64.7 50 56.0
Gohir.D02G093100 Gossypium hirsutum HOM05D000823 ORTHO05D000088 4.9e-09 64.3 54 51.9
Medtr6g036740 Medicago truncatula HOM05D000823 ORTHO05D000088 4.9e-09 64.3 63 52.4
RcHm_v2.0_Chr6g0300031 Rosa chinensis HOM05D000823 ORTHO05D000088 4.9e-09 64.3 47 55.3
Thecc.08G016800 Theobroma cacao HOM05D000823 ORTHO05D000088 4.9e-09 64.3 54 51.9
Migut.C00649 Erythranthe guttata HOM05D000823 ORTHO05D000088 6.4e-09 63.9 52 50.0
TWI12G0966 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 6.4e-09 63.9 54 48.1
ECA247G3085 Erigeron canadensis HOM05D000823 ORTHO05D000088 8.3e-09 63.5 51 52.9
MD08G1039600 Malus domestica HOM05D000823 ORTHO05D000088 8.3e-09 63.5 45 57.8
CsaV3_3G044580 Cucumis sativus L. HOM05D000823 ORTHO05D000088 1.1e-08 63.2 46 56.5
Gohir.A03G116300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 1.9e-08 62.4 54 50.0
Medtr1g021380 Medicago truncatula HOM05D000823 ORTHO05D000088 1.9e-08 62.4 50 52.0
EL10Ac1g01749 Beta vulgaris HOM05D000823 ORTHO05D000088 2.4e-08 62.0 49 51.0
CAN.G371.85 Capsicum annuum HOM05D000823 ORTHO05D000088 3.2e-08 61.6 47 53.2
TPR.G32518 Trifolium pratense HOM05D000823 ORTHO05D000088 4.1e-08 61.2 48 50.0
Medtr1g021435 Medicago truncatula HOM05D000823 ORTHO05D000088 5.4e-08 60.8 48 52.1
DCAR_012760 Daucus carota HOM05D000823 ORTHO05D000088 9.2e-08 60.1 51 49.0
Lsat_1_v5_gn_1_19200 Lactuca sativa HOM05D000823 ORTHO05D000088 9.2e-08 60.1 54 42.6
Atru.chr13.593 Acer truncatum HOM05D000823 ORTHO05D000088 1.2e-07 59.7 55 50.9
FAN15G0917 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.1e-07 58.9 40 60.0
FAN27G1265 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.1e-07 58.9 40 60.0
Prupe.1G388200 Prunus persica HOM05D000823 ORTHO05D000088 2.1e-07 58.9 38 63.2
AUR62033880 Chenopodium quinoa HOM05D000823 ORTHO05D000088 3.5e-07 58.2 49 51.0
Medtr1g021400 Medicago truncatula HOM05D000823 ORTHO05D000088 4.6e-07 57.8 48 50.0
PGR031G0338 Punica granatum HOM05D000823 ORTHO05D000088 4.6e-07 57.8 40 60.0
Cpa.g.c39547 Carica papaya HOM05D000823 ORTHO05D000088 6.0e-07 57.4 47 51.1
Hund26609 Selenicereus undatus HOM05D000823 ORTHO05D000088 6.0e-07 57.4 52 48.1
Medtr1g021410 Medicago truncatula HOM05D000823 ORTHO05D000088 7.8e-07 57.0 48 45.8


User provided reference genes

Program Settings