Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7237 Trifolium pratense HOM05D000046 ORTHO05D412482 1.7e-45 185.7 92 100.0
Medtr7g009320 Medicago truncatula HOM05D000046 ORTHO05D001818 5.0e-34 147.5 92 82.6
Ca_04100_v3 Cicer arietinum L. HOM05D000046 ORTHO05D001818 2.1e-32 142.1 92 80.4
Psat3g195200 Pisum sativum HOM05D000046 ORTHO05D001818 6.1e-32 140.6 92 78.3
Glyma.18G255600 Glycine max HOM05D000046 ORTHO05D001818 1.2e-24 116.3 93 73.1
Glyma.09G240700 Glycine max HOM05D000046 ORTHO05D001818 3.0e-23 111.7 93 71.0
VMungo1383G3374 Vigna mungo HOM05D000046 ORTHO05D001818 1.3e-21 106.3 93 71.0
Phvul.008G043900 Phaseolus vulgaris HOM05D000046 ORTHO05D001818 8.3e-21 103.6 93 69.9
arahy.Tifrunner.gnm1.ann1.640I1P Arachis hypogaea HOM05D000046 ORTHO05D001818 9.8e-14 80.1 95 54.7
arahy.Tifrunner.gnm1.ann1.T9Z7ZJ Arachis hypogaea HOM05D000046 ORTHO05D001818 9.8e-14 80.1 95 54.7
Lj1g0014213 Lotus japonicus HOM05D000046 ORTHO05D001818 9.8e-14 80.1 92 54.3
VMungo0464G0757 Vigna mungo HOM05D000046 ORTHO05D001818 4.1e-12 74.7 102 45.1
Lj2g0024718 Lotus japonicus HOM05D000046 ORTHO05D001818 3.5e-11 71.6 99 52.5
Phvul.004G026000 Phaseolus vulgaris HOM05D000046 ORTHO05D001818 5.9e-11 70.9 101 45.5
Lalb_Chr06g0175511 Lupinus albus HOM05D000046 ORTHO05D001818 8.6e-10 67.0 90 54.4
TAR622G1070 Trochodendron aralioides HOM05D000046 ORTHO05D001818 8.6e-10 67.0 93 46.2
Cpa.g.sc14.42 Carica papaya HOM05D000046 ORTHO05D001818 1.5e-09 66.2 72 50.0
Nn4g23047 Nelumbo nucifera HOM05D000046 ORTHO05D001818 1.9e-09 65.9 91 51.6
arahy.Tifrunner.gnm1.ann1.U7S369 Arachis hypogaea HOM05D000046 ORTHO05D001818 3.3e-09 65.1 87 56.3
arahy.Tifrunner.gnm1.ann1.4RH2HB Arachis hypogaea HOM05D000046 ORTHO05D001818 4.3e-09 64.7 88 55.7
CSS0005894 Camellia sinensis var. sinensis HOM05D000046 ORTHO05D001818 9.5e-09 63.5 93 45.2
Haze_14559 Corylus avellana HOM05D000046 ORTHO05D001818 9.5e-09 63.5 93 41.9
Oeu060930.1 Olea europaea HOM05D000046 ORTHO05D001818 1.6e-08 62.8 97 44.3
Prupe.3G270000 Prunus persica HOM05D000046 ORTHO05D001818 3.6e-08 61.6 93 43.0
GSVIVG01020073001 Vitis vinifera HOM05D000046 ORTHO05D001818 4.7e-08 61.2 94 43.6
Actinidia05392 Actinidia chinensis HOM05D000046 ORTHO05D001818 6.1e-08 60.8 93 41.9
Manes.17G021150 Manihot esculenta HOM05D000046 ORTHO05D001818 8.0e-08 60.5 93 43.0
CiPaw.04G020100 Carya illinoinensis HOM05D000046 ORTHO05D001818 1.0e-07 60.1 92 46.7
TAR305G0004 Trochodendron aralioides HOM05D000046 ORTHO05D001818 1.0e-07 60.1 95 42.1
TAR481G0002 Trochodendron aralioides HOM05D000046 ORTHO05D001818 1.0e-07 60.1 93 43.0
TAR629G3275 Trochodendron aralioides HOM05D000046 ORTHO05D001818 1.0e-07 60.1 93 43.0
MBI12_g09047_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D001818 1.8e-07 59.3 94 46.8
Nn3g17131 Nelumbo nucifera HOM05D000046 ORTHO05D001818 1.8e-07 59.3 95 45.3
Nitab4.5_0009146g0010 Nicotiana tabacum HOM05D000046 ORTHO05D001818 1.8e-07 59.3 94 44.7
Glyma.19G019900 Glycine max HOM05D000046 ORTHO05D001818 3.0e-07 58.5 101 41.6
Dinv33740 Davidia involucrata HOM05D000046 ORTHO05D001818 4.0e-07 58.2 94 39.4
Oeu062126.3 Olea europaea HOM05D000046 ORTHO05D001818 8.9e-07 57.0 91 42.9
AUR62026252 Chenopodium quinoa HOM05D000046 ORTHO05D001818 1.2e-06 56.6 94 40.4
Cfa009036 Carpinus fangiana HOM05D000046 ORTHO05D001818 1.5e-06 56.2 79 49.4
Haze_12065 Corylus avellana HOM05D000046 ORTHO05D001818 1.5e-06 56.2 79 49.4
HanXRQChr09g0265451 Helianthus annuus HOM05D000046 ORTHO05D001818 1.5e-06 56.2 93 38.7
Oeu011691.2 Olea europaea HOM05D000046 ORTHO05D001818 1.5e-06 56.2 94 42.6
CiPaw.04G018500 Carya illinoinensis HOM05D000046 ORTHO05D001818 2.0e-06 55.8 93 38.7
Nitab4.5_0009649g0030 Nicotiana tabacum HOM05D000046 ORTHO05D001818 2.0e-06 55.8 89 43.8
CANSAT64G2184 Cannabis sativa HOM05D000046 ORTHO05D001818 2.6e-06 55.5 92 38.0
Glyma.18G125800 Glycine max HOM05D000046 ORTHO05D001818 2.6e-06 55.5 95 41.1
Manes.15G179456 Manihot esculenta HOM05D000046 ORTHO05D001818 2.6e-06 55.5 92 39.1
Atru.chr8.1912 Acer truncatum HOM05D000046 ORTHO05D001818 3.4e-06 55.1 69 47.8
SalBow1G4640 Salvia bowleyana HOM05D000046 ORTHO05D001818 3.4e-06 55.1 97 40.2
Sopen01g006430 Solanum pennellii HOM05D000046 ORTHO05D001818 3.4e-06 55.1 93 39.8
PGSC0003DMG400000856 Solanum tuberosum HOM05D000046 ORTHO05D001818 3.4e-06 55.1 93 39.8
CAN.G279.11 Capsicum annuum HOM05D000046 ORTHO05D001818 4.4e-06 54.7 93 40.9
CAN.G38.26 Capsicum annuum HOM05D000046 ORTHO05D001818 5.7e-06 54.3 93 39.8
CiPaw.05G139800 Carya illinoinensis HOM05D000046 ORTHO05D001818 5.7e-06 54.3 93 39.8
Ca_22855_v3 Cicer arietinum L. HOM05D000046 ORTHO05D001818 5.7e-06 54.3 95 42.1
Dinv06527 Davidia involucrata HOM05D000046 ORTHO05D001818 7.5e-06 53.9 93 38.7
MD17G1047100 Malus domestica HOM05D000046 ORTHO05D001818 7.5e-06 53.9 91 41.8
Rhsim08G0068100 Rhododendron simsii HOM05D000046 ORTHO05D001818 7.5e-06 53.9 93 40.9
Ciclev10011575m.g Citrus clementina HOM05D000046 ORTHO05D001818 9.8e-06 53.5 60 50.0
HanXRQChr15g0487931 Helianthus annuus HOM05D000046 ORTHO05D001818 9.8e-06 53.5 93 38.7
QL02p081332 Quercus lobata HOM05D000046 ORTHO05D001818 9.8e-06 53.5 93 38.7
TWI34G0697 Tripterygium wilfordii HOM05D000046 ORTHO05D001818 9.8e-06 53.5 92 39.1


User provided reference genes

Program Settings