Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7164 Trifolium pratense HOM05D000429 ORTHO05D000352 4.9e-70 267.7 135 100.0
TPR.G26867 Trifolium pratense HOM05D000429 ORTHO05D000352 1.4e-37 159.8 113 73.5
TPR.G30696 Trifolium pratense HOM05D000429 ORTHO05D000880 1.1e-34 150.2 113 69.0
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 2.6e-15 85.9 117 43.6
Medtr2g054400 Medicago truncatula HOM05D000429 ORTHO05D000352 5.8e-15 84.7 102 46.1
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 7.6e-15 84.3 117 41.9
arahy.Tifrunner.gnm1.ann1.E3E3WX Arachis hypogaea HOM05D000429 ORTHO05D000352 1.3e-14 83.6 143 39.9
Phvul.007G086900 Phaseolus vulgaris HOM05D000429 ORTHO05D000352 2.2e-14 82.8 114 37.7
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-12 76.6 112 38.4
CANSAT78G2291 Cannabis sativa HOM05D000429 ORTHO05D000352 2.1e-12 76.3 114 36.8
TPR.G29947 Trifolium pratense HOM05D000047 ORTHO05D000044 3.5e-12 75.5 124 37.9
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 6.0e-12 74.7 114 36.0
CANSAT80G0915 Cannabis sativa HOM05D000047 ORTHO05D000044 1.0e-11 73.9 106 36.8
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 1.3e-11 73.6 113 35.4
CANSAT35G1271 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-11 73.2 122 34.4
CANSAT56G0555 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-11 73.2 114 36.0
MBI08_g16120_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 2.3e-11 72.8 109 38.5
CANSAT01G1973 Cannabis sativa HOM05D000429 ORTHO05D000352 3.0e-11 72.4 112 36.6
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 3.9e-11 72.0 114 38.6
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 3.9e-11 72.0 114 35.1
CANSAT56G2499 Cannabis sativa HOM05D000429 ORTHO05D000352 5.1e-11 71.6 106 37.7
TWI77G0051 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.7e-11 70.9 113 37.2
CANSAT01G1297 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-10 70.5 114 36.8
CANSAT35G1581 Cannabis sativa HOM05D000429 ORTHO05D000352 1.5e-10 70.1 104 36.5
TWI77G0163 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.5e-10 70.1 113 38.9
AUR62013405 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.9e-10 69.7 114 34.2
CANSAT56G4516 Cannabis sativa HOM05D000429 ORTHO05D000352 2.5e-10 69.3 114 35.1
CSS0028604 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.3e-10 68.9 114 35.1
CSS0029853 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.3e-10 68.9 114 35.1
CSS0043404 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.3e-10 68.9 114 35.1
CSS0046711 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.3e-10 68.9 114 35.1
CANSAT11G1830 Cannabis sativa HOM05D000429 ORTHO05D000352 3.3e-10 68.9 114 38.6
Glyma.10G091500 Glycine max HOM05D000429 ORTHO05D000352 3.3e-10 68.9 113 36.3
CANSAT71G0013 Cannabis sativa HOM05D000429 ORTHO05D000352 4.3e-10 68.6 109 35.8
AUR62044001 Chenopodium quinoa HOM05D000429 ORTHO05D000352 4.3e-10 68.6 114 33.3
CANSAT11G2636 Cannabis sativa HOM05D000429 ORTHO05D000352 5.6e-10 68.2 114 33.3
AUR62024397 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.6e-10 68.2 114 34.2
CANSAT35G1116 Cannabis sativa HOM05D000429 ORTHO05D000352 7.4e-10 67.8 114 33.3
MBI12_g41818_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 7.4e-10 67.8 107 33.6
Oeu064691.1 Olea europaea HOM05D000429 ORTHO05D000352 7.4e-10 67.8 113 34.5
AUR62021090 Chenopodium quinoa HOM05D000429 ORTHO05D000352 9.6e-10 67.4 137 30.7
AUR62022263 Chenopodium quinoa HOM05D008320 ORTHO05D000352 9.6e-10 67.4 137 30.7
CANSAT01G0251 Cannabis sativa HOM05D000429 ORTHO05D000352 1.3e-09 67.0 104 34.6
CANSAT01G2793 Cannabis sativa HOM05D008422 ORTHO05D000352 1.3e-09 67.0 113 32.7
CANSAT64G2765 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-09 66.6 100 38.0
Os03g0439900 Oryza sativa ssp. japonica HOM05D000429 ORTHO05D000352 1.6e-09 66.6 106 35.8
AUR62023870 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.1e-09 66.2 137 31.4
Oeu057937.1 Olea europaea HOM05D000429 ORTHO05D000352 2.8e-09 65.9 113 34.5
CANSAT80G0962 Cannabis sativa HOM05D000429 ORTHO05D000352 3.7e-09 65.5 114 34.2
Oeu037482.1 Olea europaea HOM05D000429 ORTHO05D000352 3.7e-09 65.5 113 33.6
Oeu064652.1 Olea europaea HOM05D000429 ORTHO05D000352 3.7e-09 65.5 113 33.6
CSS0014631 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.8e-09 65.1 114 33.3
CANSAT80G1770 Cannabis sativa HOM05D000429 ORTHO05D000352 4.8e-09 65.1 113 32.7
Oeu033810.1 Olea europaea HOM05D000429 ORTHO05D000352 4.8e-09 65.1 113 33.6
Oeu033863.1 Olea europaea HOM05D000429 ORTHO05D000352 4.8e-09 65.1 113 33.6
CANSAT01G2744 Cannabis sativa HOM05D000429 ORTHO05D000352 6.2e-09 64.7 114 34.2
CANSAT21G2111 Cannabis sativa HOM05D008422 ORTHO05D000352 8.2e-09 64.3 113 31.9
Oeu043216.1 Olea europaea HOM05D000429 ORTHO05D000352 8.2e-09 64.3 113 33.6
TWI36G1732 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-09 64.3 104 36.5
CSS0021795 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.1e-08 63.9 114 33.3
MBI05_g37662_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 1.1e-08 63.9 94 39.4
TWI81G1059 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.1e-08 63.9 111 37.8
VMungo0251G0892 Vigna mungo HOM05D000429 ORTHO05D000352 1.1e-08 63.9 83 38.6
CSS0037010 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.4e-08 63.5 113 32.7
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-08 63.5 111 35.1
CSS0008580 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.8e-08 63.2 114 32.5
CSS0025671 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.8e-08 63.2 114 33.3
CANSAT01G1463 Cannabis sativa HOM05D000429 ORTHO05D000352 2.4e-08 62.8 114 34.2
AUR62002668 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.4e-08 62.8 114 32.5
AUR62040874 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.4e-08 62.8 107 32.7
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-08 62.8 107 36.4
CANSAT25G0712 Cannabis sativa HOM05D008422 ORTHO05D000352 4.0e-08 62.0 103 32.0
FvH4_6g11891 Fragaria vesca HOM05D000429 ORTHO05D000352 4.0e-08 62.0 114 33.3
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 4.0e-08 62.0 107 36.4
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 4.0e-08 62.0 107 36.4
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 5.3e-08 61.6 114 35.1
BcaC07g38208 Brassica carinata HOM05D000429 ORTHO05D000352 9.0e-08 60.8 107 34.6
CANSAT35G1307 Cannabis sativa HOM05D000429 ORTHO05D000352 9.0e-08 60.8 107 36.4
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 9.0e-08 60.8 115 31.3
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 9.0e-08 60.8 115 33.9
CANSAT56G4150 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-07 60.5 114 31.6
AUR62041273 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.2e-07 60.5 113 31.0
ECA238G1039 Erigeron canadensis HOM05D000047 ORTHO05D002578 1.2e-07 60.5 110 31.8
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 1.5e-07 60.1 130 31.5
Atru.chr9.111 Acer truncatum HOM05D000429 ORTHO05D000352 2.0e-07 59.7 113 30.1
CANSAT80G2076 Cannabis sativa HOM05D000429 ORTHO05D000352 2.0e-07 59.7 114 30.7
MBI07_g06422_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.0e-07 59.7 107 32.7
CANSAT35G0743 Cannabis sativa HOM05D000429 ORTHO05D000352 3.4e-07 58.9 81 38.3
AUR62042094 Chenopodium quinoa HOM05D000429 ORTHO05D000352 3.4e-07 58.9 113 31.0
MBI15_g19747_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 3.4e-07 58.9 91 36.3
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 3.4e-07 58.9 113 31.9
Oeu044645.1 Olea europaea HOM05D000429 ORTHO05D000352 4.5e-07 58.5 113 31.0
CSS0027013 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.8e-07 58.2 108 33.3
AUR62042598 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.8e-07 58.2 108 27.8
Ah.01g016560 Amaranthus hybridus HOM05D016717 ORTHO05D000352 7.6e-07 57.8 109 36.7
Ah.01g016570 Amaranthus hybridus HOM05D016717 ORTHO05D000352 7.6e-07 57.8 109 36.7
FvH4_4g22761 Fragaria vesca HOM05D000429 ORTHO05D000352 1.0e-06 57.4 113 26.5
Rhsim03G0108800 Rhododendron simsii HOM05D000429 ORTHO05D000352 1.0e-06 57.4 107 37.4
AUR62040873 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.3e-06 57.0 137 28.5
Rhsim04G0229300 Rhododendron simsii HOM05D000429 ORTHO05D000352 1.3e-06 57.0 107 35.5
VMungo1215G0470 Vigna mungo HOM05D000429 ORTHO05D000352 1.3e-06 57.0 85 35.3
ECA240G3916 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.2e-06 56.2 110 31.8
ECA248G1586 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.9e-06 55.8 131 31.3
vmacro22445 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.9e-06 55.8 107 34.6
CANSAT80G1053 Cannabis sativa HOM05D000429 ORTHO05D000352 3.8e-06 55.5 89 33.7
CiPaw.11G109900 Carya illinoinensis HOM05D000429 ORTHO05D000352 3.8e-06 55.5 95 34.7
AUR62004864 Chenopodium quinoa HOM05D000429 ORTHO05D000352 3.8e-06 55.5 145 29.0
Oeu039992.1 Olea europaea HOM05D000429 ORTHO05D000352 3.8e-06 55.5 113 31.0
ECA238G4358 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.9e-06 55.1 131 31.3
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 4.9e-06 55.1 107 33.6
MBI05_g00166_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 6.5e-06 54.7 80 38.8
TWI59G1479 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 6.5e-06 54.7 113 31.9
PSO729G0192 Papaver somniferum HOM05D000429 ORTHO05D000352 8.4e-06 54.3 108 32.4


User provided reference genes

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