Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.1e-66 256.5 132 100.0
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 7.4e-55 217.2 132 85.6
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 3.4e-52 208.4 143 81.8
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 3.9e-48 194.9 132 79.5
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 4.2e-42 174.9 128 76.6
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.6e-41 172.9 112 82.1
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.3e-38 163.3 127 72.4
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.6e-38 162.9 122 73.0
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 2.8e-38 162.2 132 68.9
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 8.2e-38 160.6 122 72.1
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 2.4e-37 159.1 113 76.1
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.4e-36 155.2 135 68.9
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 1.3e-35 153.3 127 68.5
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.5e-31 139.8 114 67.5
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.9e-31 139.4 112 65.2
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 2.5e-31 139.0 119 64.7
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 3.3e-31 138.7 132 61.4
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 3.3e-31 138.7 99 71.7
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 6.9e-29 131.0 114 58.8
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.5e-28 129.8 115 62.6
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 2.6e-28 129.0 72 86.1
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 4.5e-28 128.3 116 60.3
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 7.7e-28 127.5 72 84.7
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 7.7e-28 127.5 72 84.7
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 7.7e-28 127.5 72 84.7
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 1.0e-27 127.1 122 55.7
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.2e-27 125.9 101 66.3
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 3.8e-27 125.2 119 57.1
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 5.0e-27 124.8 78 78.2
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.1e-26 123.6 121 57.9
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 1.4e-26 123.2 114 57.9
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.4e-26 123.2 119 58.0
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 1.9e-26 122.9 112 58.0
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.5e-26 122.5 90 70.0
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 4.2e-26 121.7 95 63.2
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.2e-25 120.2 89 69.7
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.6e-25 119.8 112 61.6
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.6e-25 119.8 108 62.0
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.1e-25 119.4 101 64.4
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 2.7e-25 119.0 116 55.2
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.7e-25 119.0 96 65.6
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.6e-25 118.6 97 64.9
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.7e-25 118.2 91 67.0
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.7e-25 118.2 91 67.0
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 4.7e-25 118.2 91 67.0
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 4.7e-25 118.2 113 59.3
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.7e-25 118.2 121 56.2
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 7.9e-25 117.5 125 54.4
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 7.9e-25 117.5 78 74.4
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.9e-25 117.5 108 59.3
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.0e-24 117.1 107 64.5
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 1.8e-24 116.3 66 84.8
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 8.8e-24 114.0 89 65.2
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 2.0e-23 112.8 81 74.1
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 2.6e-23 112.5 122 53.3
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 3.3e-23 112.1 84 65.5
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.3e-23 112.1 67 82.1
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.4e-23 111.7 64 82.8
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 7.4e-23 110.9 79 68.4
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 9.7e-23 110.5 86 66.3
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 1.7e-22 109.8 124 53.2
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 2.2e-22 109.4 122 50.0
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 2.2e-22 109.4 72 76.4
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 2.8e-22 109.0 102 56.9
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 6.3e-22 107.8 62 83.9
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 6.3e-22 107.8 98 62.2
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 8.2e-22 107.5 105 59.0
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 8.2e-22 107.5 120 53.3
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 8.2e-22 107.5 74 70.3
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 3.1e-21 105.5 122 49.2
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 4.1e-21 105.1 93 63.4
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 9.1e-21 104.0 135 49.6
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 9.1e-21 104.0 106 58.5
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 9.1e-21 104.0 75 70.7
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.2e-20 103.6 107 55.1
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.5e-20 103.2 109 56.0
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 1.5e-20 103.2 119 51.3
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 2.6e-20 102.4 117 54.7
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 3.4e-20 102.1 91 56.0
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 4.5e-20 101.7 109 55.0
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 4.5e-20 101.7 109 55.0
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 4.5e-20 101.7 102 54.9
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 5.9e-20 101.3 59 81.4
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.0e-19 100.5 100 53.0
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.3e-19 100.1 84 59.5
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.3e-19 100.1 106 54.7
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.7e-19 99.8 62 77.4
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 2.2e-19 99.4 62 79.0
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 6.5e-19 97.8 75 66.7
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 1.4e-18 96.7 104 55.8
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 1.9e-18 96.3 100 53.0
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.5e-18 95.9 94 54.3
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 4.2e-18 95.1 94 54.3
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 5.5e-18 94.7 81 58.0
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 5.5e-18 94.7 86 60.5
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 5.5e-18 94.7 94 54.3
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 5.5e-18 94.7 99 52.5
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 2.7e-17 92.4 69 68.1
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 6.1e-17 91.3 91 54.9
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 8.0e-17 90.9 83 59.0
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 8.0e-17 90.9 83 59.0
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 8.8e-16 87.4 101 51.5
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 3.3e-15 85.5 64 64.1
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.3e-13 78.2 69 63.8
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.0e-13 77.8 55 70.9
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.3e-11 73.6 116 38.8
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 8.5e-11 70.9 78 50.0
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.6e-07 59.3 60 55.0
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.6e-07 59.3 60 55.0


User provided reference genes

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