Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 1.7e-194 682.6 364 100.0
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 6.9e-188 660.6 364 93.7
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 6.1e-184 647.5 364 91.5
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 1.8e-183 646.0 364 92.0
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 5.7e-182 641.0 364 90.4
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 1.1e-180 636.7 365 91.2
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 3.1e-180 635.2 364 92.3
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 7.0e-180 634.0 364 91.8
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 7.7e-179 630.6 364 91.8
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 1.3e-178 629.8 364 89.0
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 1.7e-178 629.4 364 92.0
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 2.2e-178 629.0 364 92.0
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.9e-178 628.6 364 89.3
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.9e-178 628.6 364 89.3
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 8.5e-178 627.1 364 88.7
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 1.9e-177 625.9 364 89.0
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 2.5e-177 625.5 364 88.7
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 3.2e-177 625.2 364 88.5
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 4.2e-177 624.8 365 88.2
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 5.5e-177 624.4 363 90.4
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 7.2e-177 624.0 364 88.5
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 2.1e-176 622.5 364 89.3
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 3.6e-176 621.7 364 87.9
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 1.0e-175 620.2 366 91.3
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 1.8e-175 619.4 364 87.6
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 6.7e-175 617.5 364 86.8
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 4.4e-174 614.8 364 86.8
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 4.4e-174 614.8 364 86.8
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 4.4e-174 614.8 364 87.1
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 5.7e-174 614.4 364 86.5
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 1.3e-173 613.2 364 86.3
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 1.7e-173 612.8 364 85.7
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 2.2e-173 612.5 364 89.6
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 2.2e-173 612.5 364 86.8
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 2.8e-173 612.1 365 86.3
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 2.8e-173 612.1 364 85.7
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 2.8e-173 612.1 364 85.7
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 3.7e-173 611.7 364 85.4
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 3.7e-173 611.7 364 87.1
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 4.8e-173 611.3 366 90.4
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 8.2e-173 610.5 365 86.8
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 8.2e-173 610.5 365 86.8
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 1.1e-172 610.1 364 85.7
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 1.1e-172 610.1 365 86.3
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 1.1e-172 610.1 364 85.4
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.4e-172 609.8 364 85.4
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.4e-172 609.8 364 85.2
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 4.1e-172 608.2 366 86.1
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 4.1e-172 608.2 364 85.2
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 7.0e-172 607.4 364 87.1
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 7.0e-172 607.4 364 86.8
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 9.1e-172 607.1 365 86.3
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 9.1e-172 607.1 365 86.8
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 1.2e-171 606.7 365 85.2
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 1.2e-171 606.7 364 85.7
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 1.6e-171 606.3 364 84.9
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 2.0e-171 605.9 365 86.0
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 2.0e-171 605.9 364 84.9
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.6e-171 605.5 365 86.0
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 2.6e-171 605.5 364 86.3
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 3.5e-171 605.1 364 85.2
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 5.9e-171 604.4 364 84.1
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 7.7e-171 604.0 381 84.0
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 1.0e-170 603.6 364 84.9
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.7e-170 602.8 364 84.6
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 2.2e-170 602.4 364 84.6
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 2.9e-170 602.1 364 84.6
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 2.9e-170 602.1 364 87.6
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 3.8e-170 601.7 364 85.4
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 3.8e-170 601.7 364 85.2
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.8e-170 601.7 364 84.9
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 5.0e-170 601.3 364 84.1
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 8.5e-170 600.5 364 84.9
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.9e-169 599.4 364 83.5
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 7.2e-169 597.4 364 84.3
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 9.4e-169 597.0 364 83.5
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 9.4e-169 597.0 364 84.1
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 1.2e-168 596.7 364 83.2
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 1.2e-168 596.7 360 84.4
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.6e-168 596.3 364 84.3
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 2.7e-168 595.5 364 83.0
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 4.7e-168 594.7 357 85.2
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 4.7e-168 594.7 364 84.6
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.4e-167 593.2 364 83.8
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.4e-167 593.2 364 83.8
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 1.8e-167 592.8 364 82.7
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 1.8e-167 592.8 364 83.8
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 2.3e-167 592.4 364 83.0
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 3.0e-167 592.0 364 83.2
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.0e-167 592.0 364 83.2
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.0e-167 592.0 364 83.2
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 5.2e-167 591.3 362 83.4
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 6.7e-167 590.9 365 83.8
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 1.5e-166 589.7 364 83.0
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 2.0e-166 589.3 365 83.3
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 4.4e-166 588.2 365 83.3
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 5.7e-166 587.8 365 83.3
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 7.5e-166 587.4 364 82.4
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 9.7e-166 587.0 364 82.4
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 9.7e-166 587.0 364 82.4
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.3e-165 586.6 364 83.5
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 3.7e-165 585.1 364 82.7
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 6.3e-165 584.3 364 81.9
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.1e-164 583.6 364 83.0
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 5.3e-164 581.3 326 92.3
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 5.3e-164 581.3 326 92.3
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 7.0e-164 580.9 364 81.9
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 2.0e-163 579.3 356 84.0
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 4.5e-163 578.2 366 81.7
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 1.0e-162 577.0 364 83.2
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 1.0e-162 577.0 364 83.2
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 1.0e-162 577.0 364 83.2
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 1.0e-162 577.0 348 89.4
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 2.9e-162 575.5 364 83.0
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 2.5e-161 572.4 365 81.6
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 5.5e-161 571.2 348 84.2
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.6e-160 569.7 365 80.5
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 4.0e-159 565.1 348 84.8
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 5.2e-159 564.7 348 83.0
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.6e-158 562.4 348 83.3
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 7.5e-158 560.8 366 84.4
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 6.3e-157 557.8 364 79.9
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 8.3e-157 557.4 348 81.9
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 1.4e-156 556.6 348 82.2
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 1.6e-155 553.1 405 73.8
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 2.0e-155 552.7 365 78.1
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.3e-154 550.1 347 81.8
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 8.6e-154 547.4 325 88.6
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 2.5e-153 545.8 364 81.6
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 1.6e-152 543.1 349 80.5
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 2.1e-152 542.7 326 86.8
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.8e-151 539.7 364 78.3
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 5.2e-151 538.1 363 78.0
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 3.7e-149 531.9 364 77.2
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 7.0e-148 527.7 307 90.2
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 1.3e-146 523.5 364 75.0
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.3e-133 480.3 284 87.7
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.3e-129 464.5 357 67.8
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 6.8e-127 458.0 326 77.9
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 6.8e-127 458.0 368 64.7
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 5.8e-126 454.9 267 89.1
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 4.3e-121 438.7 365 66.8
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.8e-119 431.4 364 65.9
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 1.5e-118 430.3 357 66.4
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 2.0e-118 429.9 368 60.6
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 1.7e-109 400.2 376 57.4
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.4e-108 396.4 350 58.0
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.3e-108 394.4 239 85.8
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 4.6e-107 392.1 367 56.9
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.0e-107 391.7 321 70.1
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 8.1e-104 381.3 355 54.4
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 4.9e-101 372.1 229 83.4
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 4.5e-94 349.0 358 58.4
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.4e-76 290.8 199 78.4
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 5.1e-74 282.3 239 60.3
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 6.3e-72 275.4 302 47.7
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 5.5e-68 262.3 310 44.8
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.3e-64 251.1 276 49.6
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.7e-61 240.7 150 82.7
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 5.2e-58 229.2 328 38.1
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.7e-53 214.2 272 44.1
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 9.4e-52 208.4 186 65.1
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.0e-50 204.9 281 43.8
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.0e-46 190.7 108 87.0
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.7e-45 187.6 206 52.9
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 1.0e-42 178.3 210 48.6
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.3e-42 177.2 197 50.8
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 7.7e-38 162.2 143 64.3
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.4e-31 139.4 119 58.8
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 9.2e-31 138.7 68 100.0
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 1.9e-28 131.0 82 84.1
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 1.1e-23 115.2 156 48.7
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 6.4e-16 89.4 55 81.8
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 1.8e-10 71.2 39 87.2
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 8.9e-10 68.9 57 57.9
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 2.6e-09 67.4 37 86.5


User provided reference genes

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