Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7041 Trifolium pratense HOM05D005365 ORTHO05D006910 1.0e-20 102.4 52 100.0
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 1.5e-19 98.6 52 94.2
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 2.8e-18 94.4 52 94.2
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 2.7e-16 87.8 52 90.4
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 2.7e-16 87.8 52 90.4
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 2.7e-16 87.8 52 84.6
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 3.5e-16 87.4 52 82.7
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 3.5e-16 87.4 52 82.7
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 7.7e-16 86.3 52 78.8
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 7.7e-16 86.3 52 78.8
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.0e-15 85.9 51 88.2
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.0e-15 85.9 51 88.2
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 1.3e-15 85.5 52 78.8
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 1.7e-15 85.1 52 80.8
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 2.9e-15 84.3 52 78.8
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 2.9e-15 84.3 52 78.8
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 2.9e-15 84.3 52 86.5
Rhsim10G0178300 Rhododendron simsii HOM05D005365 ORTHO05D006910 5.0e-15 83.6 52 78.8
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 6.5e-15 83.2 52 78.8
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 8.5e-15 82.8 51 80.4
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 8.5e-15 82.8 51 80.4
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 1.1e-14 82.4 52 76.9
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 1.1e-14 82.4 52 80.8
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 1.1e-14 82.4 52 80.8
Dinv28185 Davidia involucrata HOM05D005365 ORTHO05D006910 1.1e-14 82.4 52 76.9
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 1.1e-14 82.4 52 76.9
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 1.9e-14 81.6 51 78.4
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 1.9e-14 81.6 51 78.4
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 1.9e-14 81.6 52 78.8
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 4.2e-14 80.5 51 78.4
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 4.2e-14 80.5 51 76.5
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 4.2e-14 80.5 51 76.5
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 4.2e-14 80.5 51 76.5
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 4.2e-14 80.5 52 75.0
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 4.2e-14 80.5 51 76.5
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 5.5e-14 80.1 52 78.8
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 7.2e-14 79.7 51 80.4
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 9.4e-14 79.3 52 69.2
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 9.4e-14 79.3 52 84.6
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 1.2e-13 79.0 51 74.5
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 1.2e-13 79.0 51 74.5
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 1.2e-13 79.0 51 74.5
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 1.2e-13 79.0 52 78.8
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 1.2e-13 79.0 51 74.5
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 1.6e-13 78.6 52 76.9
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 1.6e-13 78.6 52 76.9
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 1.6e-13 78.6 52 76.9
GSVIVG01038362001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.6e-13 78.6 52 75.0
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 2.7e-13 77.8 52 75.0
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 3.6e-13 77.4 51 80.4
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 4.7e-13 77.0 51 72.5
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 4.7e-13 77.0 52 75.0
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 4.7e-13 77.0 52 73.1
Oeu012494.1 Olea europaea HOM05D005365 ORTHO05D006910 6.1e-13 76.6 52 73.1
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 8.0e-13 76.3 52 75.0
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 8.0e-13 76.3 52 73.1
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 1.0e-12 75.9 52 73.1
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 1.0e-12 75.9 52 73.1
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 1.4e-12 75.5 51 74.5
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 1.4e-12 75.5 52 71.2
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 1.4e-12 75.5 51 70.6
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 1.4e-12 75.5 51 70.6
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 1.4e-12 75.5 51 74.5
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.8e-12 75.1 52 71.2
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 3.0e-12 74.3 51 72.5
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 3.0e-12 74.3 52 71.2
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 4.0e-12 73.9 52 71.2
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 4.0e-12 73.9 52 69.2
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 5.2e-12 73.6 51 76.5
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 5.2e-12 73.6 52 73.1
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 6.8e-12 73.2 52 69.2
CDE05G3412 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 6.8e-12 73.2 52 69.2
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 6.8e-12 73.2 52 75.0
Gohir.D04G112220 Gossypium hirsutum HOM05D005365 ORTHO05D006910 6.8e-12 73.2 52 73.1
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 6.8e-12 73.2 51 72.5
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 1.2e-11 72.4 51 70.6
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 1.2e-11 72.4 52 65.4
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 1.5e-11 72.0 52 65.4
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 2.0e-11 71.6 51 70.6
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 2.0e-11 71.6 51 62.7
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 2.6e-11 71.2 52 67.3
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 2.6e-11 71.2 52 67.3
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 3.4e-11 70.9 50 70.0
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 4.4e-11 70.5 50 68.0
Gorai.005G096400 Gossypium raimondii HOM05D005365 ORTHO05D015145 4.4e-11 70.5 49 75.5
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 4.4e-11 70.5 51 62.7
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 5.7e-11 70.1 50 68.0
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 5.7e-11 70.1 51 66.7
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 7.5e-11 69.7 50 68.0
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 9.8e-11 69.3 50 68.0
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 9.8e-11 69.3 50 68.0
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 9.8e-11 69.3 51 68.6
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 1.3e-10 68.9 52 57.7
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 1.3e-10 68.9 51 64.7
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 1.3e-10 68.9 50 68.0
Gohir.D09G013833 Gossypium hirsutum HOM05D005365 ORTHO05D015145 1.7e-10 68.6 46 73.9
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 2.8e-10 67.8 52 67.3
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 3.7e-10 67.4 44 75.0
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 6.3e-10 66.6 51 62.7
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 8.3e-10 66.2 52 61.5
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 8.3e-10 66.2 50 66.0
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 1.8e-09 65.1 51 66.7
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 4.1e-09 63.9 52 59.6
SEGI_18021 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 1.6e-08 62.0 52 53.8
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 1.3e-07 58.9 52 61.5
HPP92_006138 Vanilla planifolia HOM05D005365 ORTHO05D006910 7.2e-06 53.1 52 53.8


User provided reference genes

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