Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 3.0e-38 161.4 82 100.0
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 8.4e-17 90.1 68 69.1
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 4.2e-16 87.8 71 64.8
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 5.5e-16 87.4 67 68.7
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 3.9e-14 81.3 65 61.5
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 9.6e-13 76.6 65 64.6
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.3e-12 76.3 68 58.8
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 6.2e-12 73.9 70 51.4
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.1e-11 73.2 66 59.1
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.2e-10 69.7 60 60.0
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.2e-10 69.7 60 60.0
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 1.5e-10 69.3 69 55.1
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 2.6e-10 68.6 70 52.9
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 2.6e-10 68.6 70 52.9
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 4.5e-10 67.8 60 55.0
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 5.8e-10 67.4 60 63.3
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 1.0e-09 66.6 60 50.0
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.7e-09 65.9 63 52.4
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.2e-09 65.5 62 53.2
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 2.2e-09 65.5 61 59.0
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 3.8e-09 64.7 63 55.6
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 2.5e-08 62.0 63 54.0
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 3.2e-08 61.6 60 55.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 3.2e-08 61.6 65 52.3
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 5.5e-08 60.8 30 96.7
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 9.3e-08 60.1 60 48.3
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 9.3e-08 60.1 60 56.7
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.6e-07 59.3 61 55.7
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.1e-07 58.9 66 50.0
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 2.7e-07 58.5 65 47.7
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.7e-07 58.5 64 53.1
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 3.5e-07 58.2 67 53.7
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 4.6e-07 57.8 65 53.8
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 4.6e-07 57.8 64 54.7
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 4.6e-07 57.8 60 50.0
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 4.6e-07 57.8 67 44.8
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 6.1e-07 57.4 62 54.8
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 6.1e-07 57.4 62 54.8
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 1.0e-06 56.6 65 52.3
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.3e-06 56.2 62 53.2
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.3e-06 56.2 62 53.2
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 1.3e-06 56.2 67 50.7
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 1.3e-06 56.2 63 49.2
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.8e-06 55.8 64 53.1
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 2.3e-06 55.5 69 47.8
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 2.3e-06 55.5 65 50.8
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.3e-06 55.5 67 50.7
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 2.3e-06 55.5 83 42.2
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 3.0e-06 55.1 65 47.7
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 3.0e-06 55.1 60 46.7
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 3.0e-06 55.1 68 48.5
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 3.0e-06 55.1 68 48.5
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 3.0e-06 55.1 68 48.5
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 3.9e-06 54.7 64 48.4
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 3.9e-06 54.7 65 50.8
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 3.9e-06 54.7 60 45.0
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 3.9e-06 54.7 60 45.0
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 3.9e-06 54.7 65 52.3
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 3.9e-06 54.7 68 52.9
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.9e-06 54.7 70 47.1
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 3.9e-06 54.7 65 52.3
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.9e-06 54.7 65 50.8
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 3.9e-06 54.7 68 45.6
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 5.1e-06 54.3 68 51.5
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.1e-06 54.3 68 47.1
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 5.1e-06 54.3 65 46.2
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 5.1e-06 54.3 68 45.6
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 6.7e-06 53.9 68 52.9
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 6.7e-06 53.9 67 52.2
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 6.7e-06 53.9 71 46.5
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 8.7e-06 53.5 60 43.3
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 8.7e-06 53.5 77 44.2


User provided reference genes

Program Settings