Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 1.2e-56 223.0 118 100.0
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 5.8e-51 204.1 118 90.7
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 2.9e-50 201.8 118 89.0
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 5.0e-47 191.0 112 88.4
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 3.3e-46 188.3 112 86.6
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 5.6e-46 187.6 118 85.6
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 1.6e-45 186.0 112 84.8
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.1e-44 183.3 111 86.5
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 5.1e-39 164.5 111 76.6
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 3.3e-38 161.8 112 75.0
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 3.3e-38 161.8 111 75.7
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 3.3e-38 161.8 111 75.7
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 1.2e-37 159.8 111 75.7
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 1.2e-37 159.8 111 75.7
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.2e-37 159.8 115 74.8
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.2e-37 159.8 115 74.8
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.2e-37 159.8 115 74.8
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 1.6e-37 159.5 115 73.0
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 3.6e-37 158.3 112 74.1
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 6.2e-37 157.5 112 75.0
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 1.1e-36 156.8 110 74.5
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 1.8e-36 156.0 109 72.5
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 4.0e-36 154.8 112 73.2
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 5.2e-36 154.5 112 72.3
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 1.2e-35 153.3 109 70.6
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 2.0e-35 152.5 112 74.1
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 2.0e-35 152.5 112 74.1
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 7.6e-35 150.6 112 71.4
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 1.3e-34 149.8 115 67.8
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 2.9e-34 148.7 116 70.7
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.8e-34 148.3 110 71.8
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 6.4e-34 147.5 110 71.8
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 1.4e-33 146.4 114 69.3
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 1.9e-33 146.0 123 68.3
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 2.4e-33 145.6 115 69.6
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 2.4e-33 145.6 109 72.5
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 4.1e-33 144.8 109 67.9
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.1e-33 144.8 116 69.0
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.1e-33 144.8 116 69.0
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 5.4e-33 144.4 106 71.7
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 7.1e-33 144.1 111 70.3
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 7.1e-33 144.1 117 66.7
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 9.2e-33 143.7 109 70.6
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 9.2e-33 143.7 115 67.8
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 1.2e-32 143.3 111 69.4
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 1.6e-32 142.9 111 67.6
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 1.6e-32 142.9 107 71.0
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 2.1e-32 142.5 110 69.1
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 2.1e-32 142.5 109 72.5
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.7e-32 142.1 111 67.6
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.7e-32 142.1 109 68.8
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 2.7e-32 142.1 110 69.1
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 4.6e-32 141.4 110 69.1
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 1.3e-31 139.8 112 67.0
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 1.3e-31 139.8 100 73.0
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.7e-31 139.4 106 71.7
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 1.7e-31 139.4 99 69.7
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 1.7e-31 139.4 110 67.3
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 2.3e-31 139.0 117 65.0
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 3.0e-31 138.7 112 68.8
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 3.9e-31 138.3 111 65.8
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 3.9e-31 138.3 101 72.3
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 8.6e-31 137.1 107 67.3
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 8.6e-31 137.1 113 67.3
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 8.6e-31 137.1 104 67.3
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 2.5e-30 135.6 97 74.2
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 2.5e-30 135.6 97 74.2
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 2.5e-30 135.6 105 65.7
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 3.3e-30 135.2 106 67.0
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 3.3e-30 135.2 105 68.6
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.3e-30 134.8 116 64.7
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 5.6e-30 134.4 128 60.9
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 5.6e-30 134.4 105 65.7
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 5.6e-30 134.4 109 67.0
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 7.3e-30 134.0 90 78.9
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 1.2e-29 133.3 105 68.6
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 1.2e-29 133.3 113 64.6
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 2.1e-29 132.5 115 63.5
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 2.8e-29 132.1 105 67.6
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 4.7e-29 131.3 105 64.8
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 8.1e-29 130.6 102 67.6
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 8.1e-29 130.6 102 67.6
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 2.4e-28 129.0 118 61.9
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 3.1e-28 128.6 114 64.9
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 4.0e-28 128.3 89 70.8
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 4.0e-28 128.3 113 65.5
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 5.2e-28 127.9 109 63.3
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 6.9e-28 127.5 113 65.5
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 6.9e-28 127.5 82 79.3
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 1.2e-27 126.7 104 64.4
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 1.5e-27 126.3 92 72.8
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 2.0e-27 125.9 82 76.8
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 2.0e-27 125.9 82 76.8
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.3e-26 123.2 87 69.0
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 3.8e-26 121.7 102 59.8
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 4.9e-26 121.3 87 69.0
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 6.4e-26 120.9 81 74.1
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.1e-25 120.2 82 75.6
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 2.3e-23 112.5 153 48.4
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.8e-21 105.5 105 57.1
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 2.8e-21 105.5 115 55.7
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 9.9e-19 97.1 82 63.4
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 9.9e-19 97.1 82 63.4
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 2.2e-18 95.9 115 47.0
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 8.4e-18 94.0 85 54.1
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 1.4e-17 93.2 81 63.0
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 1.4e-17 93.2 83 63.9
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 2.1e-16 89.4 84 48.8
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 2.1e-16 89.4 82 51.2
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 1.0e-15 87.0 111 44.1
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 2.8e-13 79.0 58 65.5
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 4.8e-13 78.2 58 65.5
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 8.1e-13 77.4 58 62.1
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 2.4e-12 75.9 76 61.8
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 6.9e-12 74.3 89 39.3
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 9.0e-12 73.9 78 52.6
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 1.2e-11 73.6 61 57.4
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 2.0e-11 72.8 78 59.0
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 1.7e-10 69.7 64 51.6
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 2.2e-10 69.3 69 50.7
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 2.9e-10 68.9 54 59.3
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 6.0e-08 61.2 49 65.3
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 2.3e-07 59.3 55 54.5
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 8.7e-07 57.4 46 58.7


User provided reference genes

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