Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 2.9e-169 598.6 326 100.0
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 1.3e-97 360.5 345 68.7
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.4e-78 297.4 356 61.2
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 1.3e-76 290.8 347 59.4
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 6.7e-49 198.7 330 47.9
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 8.2e-47 191.8 410 41.2
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 1.4e-46 191.0 410 40.7
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 2.5e-43 180.3 382 43.2
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.8e-33 147.5 365 39.5
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 2.2e-31 140.6 374 37.2
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 2.2e-31 140.6 266 42.1
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 8.2e-31 138.7 337 40.9
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 1.1e-30 138.3 429 35.2
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 1.5e-29 134.4 176 54.5
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 4.5e-29 132.9 314 37.6
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 2.5e-27 127.1 328 38.1
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 3.2e-27 126.7 330 38.5
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 7.2e-27 125.6 329 37.1
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 1.6e-26 124.4 341 36.7
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 1.6e-26 124.4 358 34.9
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 4.7e-26 122.9 361 34.1
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 6.1e-26 122.5 390 36.9
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 1.4e-25 121.3 352 37.8
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 3.9e-25 119.8 344 39.0
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 1.5e-24 117.9 317 38.2
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 1.5e-24 117.9 310 37.1
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 2.6e-24 117.1 344 37.8
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 7.4e-24 115.5 232 41.8
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.7e-23 114.4 327 35.2
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 2.2e-23 114.0 321 37.1
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 2.8e-23 113.6 432 34.0
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 8.2e-23 112.1 376 34.6
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 1.1e-22 111.7 348 33.9
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.8e-22 110.9 342 37.1
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 3.1e-22 110.2 171 43.9
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 4.1e-22 109.8 427 33.3
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 4.1e-22 109.8 336 36.3
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 4.1e-22 109.8 294 33.7
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 7.0e-22 109.0 313 33.9
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 4.5e-21 106.3 420 33.8
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 4.5e-21 106.3 468 31.0
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 1.3e-20 104.8 389 33.2
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 2.2e-20 104.0 425 30.4
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 8.5e-20 102.1 321 35.8
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 1.5e-19 101.3 368 35.1
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 4.2e-19 99.8 352 33.0
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 4.2e-19 99.8 439 31.7
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 9.4e-19 98.6 375 33.3
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 1.2e-18 98.2 343 33.5
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 2.7e-18 97.1 338 34.0
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 2.7e-18 97.1 323 35.9
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.4e-17 94.7 195 39.5
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 3.0e-17 93.6 438 30.1
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 6.7e-17 92.4 281 34.5
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 1.2e-16 91.7 248 37.9
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 1.2e-16 91.7 443 30.2
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 2.0e-16 90.9 100 58.0
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 7.5e-16 89.0 360 34.2
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 9.7e-16 88.6 404 31.9
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 1.7e-15 87.8 323 30.7
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 6.3e-15 85.9 286 35.0
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 1.4e-14 84.7 248 33.9
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 1.8e-14 84.3 268 33.2
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 5.3e-14 82.8 264 32.2
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 5.3e-14 82.8 472 28.4
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 5.3e-14 82.8 337 29.7
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 2.7e-13 80.5 107 50.5
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 2.7e-13 80.5 107 50.5
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 2.7e-13 80.5 244 36.1
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 4.5e-13 79.7 318 31.8
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.7e-12 77.8 342 33.3
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 2.2e-12 77.4 175 37.7
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 2.2e-12 77.4 393 31.8
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 5.0e-12 76.3 100 46.0
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 8.5e-12 75.5 379 29.0
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 1.9e-11 74.3 297 32.3
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 3.2e-11 73.6 376 28.5
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 1.6e-10 71.2 101 47.5
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.6e-10 71.2 273 34.8
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 2.1e-10 70.9 166 39.8
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 3.6e-10 70.1 226 36.3
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 3.6e-10 70.1 239 31.0
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 4.7e-10 69.7 239 31.0
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 3.0e-09 67.0 239 30.1
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 5.2e-09 66.2 272 33.8
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 6.8e-09 65.9 390 25.9
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 8.8e-09 65.5 266 33.1
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 8.8e-09 65.5 314 29.6
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 8.8e-09 65.5 292 29.8
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 1.5e-08 64.7 341 27.3
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 2.6e-08 63.9 222 31.5
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 3.4e-08 63.5 389 27.2
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 4.4e-08 63.2 387 26.9
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 5.7e-08 62.8 362 29.0
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 2.2e-07 60.8 381 27.0
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 2.2e-07 60.8 252 31.3
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 2.8e-07 60.5 405 24.9
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 6.3e-07 59.3 315 30.5
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 2.4e-06 57.4 367 25.9
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 2.4e-06 57.4 67 47.8
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 3.1e-06 57.0 159 34.0
QL10p061553 Quercus lobata HOM05D006297 ORTHO05D007873 4.1e-06 56.6 57 52.6


User provided reference genes

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