Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 1.5e-101 372.9 184 100.0
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 5.7e-98 360.9 184 96.7
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 1.3e-97 359.8 184 96.2
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 2.2e-97 359.0 184 96.2
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 4.9e-97 357.8 184 95.1
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 3.2e-96 355.1 184 95.1
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 7.8e-95 350.5 184 92.9
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 1.3e-89 333.2 184 88.0
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 3.9e-86 321.6 186 83.3
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 1.2e-84 316.6 186 82.3
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 1.4e-83 313.2 186 80.6
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 1.1e-80 303.5 186 76.9
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 5.4e-80 301.2 186 78.0
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 1.6e-79 299.7 186 78.0
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 1.6e-79 299.7 186 75.8
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 2.7e-79 298.9 186 76.3
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 3.5e-79 298.5 186 77.4
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 3.5e-79 298.5 186 75.8
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 3.5e-79 298.5 186 75.3
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 4.6e-79 298.1 184 76.6
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 4.6e-79 298.1 186 75.3
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 6.0e-79 297.7 186 76.3
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 6.0e-79 297.7 186 74.7
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 7.8e-79 297.4 186 75.8
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.0e-78 297.0 186 74.7
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.0e-78 297.0 186 74.7
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 1.0e-78 297.0 186 75.3
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.0e-78 297.0 186 76.3
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 1.3e-78 296.6 186 76.9
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 3.0e-78 295.4 186 74.7
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 3.9e-78 295.0 185 76.2
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 3.9e-78 295.0 184 76.6
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 5.1e-78 294.7 186 73.7
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 6.6e-78 294.3 185 74.6
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 6.6e-78 294.3 186 74.2
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 6.6e-78 294.3 186 75.8
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.1e-77 293.5 186 75.8
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 1.5e-77 293.1 182 74.2
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 1.5e-77 293.1 185 72.4
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.9e-77 292.7 186 75.8
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 1.9e-77 292.7 186 75.3
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 1.9e-77 292.7 186 73.7
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 1.9e-77 292.7 182 73.6
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 1.9e-77 292.7 186 74.7
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.5e-77 292.4 186 73.1
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.5e-77 292.4 186 73.1
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 2.5e-77 292.4 186 74.2
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 3.3e-77 292.0 186 73.7
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 3.3e-77 292.0 181 75.1
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 3.3e-77 292.0 186 73.7
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 3.3e-77 292.0 185 75.1
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 4.3e-77 291.6 186 74.2
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 4.3e-77 291.6 186 74.7
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 4.3e-77 291.6 186 75.3
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 5.6e-77 291.2 186 73.7
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 5.6e-77 291.2 181 76.8
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 7.3e-77 290.8 184 75.0
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 9.5e-77 290.4 186 73.1
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 1.2e-76 290.0 186 74.2
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.6e-76 289.7 181 74.0
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 1.6e-76 289.7 184 73.4
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 2.1e-76 289.3 186 73.7
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 2.1e-76 289.3 181 76.2
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 2.1e-76 289.3 186 75.3
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 2.8e-76 288.9 185 74.1
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 3.6e-76 288.5 186 73.7
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.6e-76 288.5 186 73.7
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 3.6e-76 288.5 184 75.0
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 4.7e-76 288.1 181 73.5
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 4.7e-76 288.1 184 75.0
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 6.2e-76 287.7 182 73.1
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 8.1e-76 287.3 186 73.1
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 8.1e-76 287.3 185 74.6
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 8.1e-76 287.3 181 73.5
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 1.1e-75 287.0 181 72.9
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 1.1e-75 287.0 182 73.6
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 1.4e-75 286.6 181 72.9
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 1.4e-75 286.6 178 75.3
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 1.4e-75 286.6 184 74.5
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.4e-75 286.6 184 74.5
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.4e-75 286.6 184 74.5
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 1.4e-75 286.6 186 72.6
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.4e-75 286.6 184 74.5
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 1.8e-75 286.2 181 72.9
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 1.8e-75 286.2 184 72.8
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 1.8e-75 286.2 186 70.4
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 2.3e-75 285.8 186 73.1
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 3.1e-75 285.4 181 71.8
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 3.1e-75 285.4 181 72.4
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 3.1e-75 285.4 181 72.4
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 3.1e-75 285.4 181 72.4
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 3.1e-75 285.4 181 72.4
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 3.1e-75 285.4 186 73.7
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 4.0e-75 285.0 181 72.4
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 5.2e-75 284.6 184 72.3
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 5.2e-75 284.6 181 72.4
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 8.9e-75 283.9 181 71.8
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 8.9e-75 283.9 180 73.3
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 8.9e-75 283.9 180 73.3
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 1.2e-74 283.5 181 71.8
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 1.2e-74 283.5 181 71.8
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.2e-74 283.5 186 72.6
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.5e-74 283.1 186 72.0
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 2.0e-74 282.7 181 71.8
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 3.4e-74 282.0 184 72.8
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 7.6e-74 280.8 184 73.9
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 7.6e-74 280.8 184 71.2
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 2.2e-73 279.3 184 70.7
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 2.9e-73 278.9 174 75.9
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 6.4e-73 277.7 186 70.4
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.1e-72 276.9 181 71.3
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 7.8e-71 270.8 181 70.7
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 1.3e-70 270.0 183 71.0
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 3.9e-70 268.5 172 72.7
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 5.1e-70 268.1 185 67.0
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 1.9e-69 266.2 181 69.6
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 3.4e-66 255.4 173 70.5
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 3.4e-66 255.4 180 65.6
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 2.9e-65 252.3 186 62.4
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 1.5e-61 240.0 187 61.5
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 7.9e-55 217.6 182 52.7
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.1e-53 213.8 186 54.8
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 4.3e-53 211.8 181 54.1
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 9.9e-50 200.7 170 59.4
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 9.3e-48 194.1 183 48.6
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 7.9e-47 191.0 181 50.8
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 9.6e-45 184.1 151 58.9
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 1.3e-44 183.7 182 45.1
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 4.9e-41 171.8 180 48.9
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 7.6e-34 147.9 87 79.3
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 2.2e-33 146.4 194 43.8
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 1.4e-24 117.1 87 63.2
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 2.6e-18 96.3 156 34.0
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 8.5e-17 91.3 54 74.1


User provided reference genes

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