Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 9.2e-58 226.5 100 100.0
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 1.5e-47 192.6 101 83.2
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 4.4e-44 181.0 101 77.2
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 3.4e-36 154.8 99 66.7
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 9.9e-36 153.3 99 67.7
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.7e-35 152.5 99 67.7
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 2.2e-35 152.1 100 64.0
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 2.9e-35 151.8 99 67.7
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 2.9e-35 151.8 99 66.7
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 3.8e-35 151.4 99 66.7
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 4.9e-35 151.0 99 67.7
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 4.9e-35 151.0 98 66.3
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 4.9e-35 151.0 99 65.7
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 4.9e-35 151.0 99 65.7
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 4.9e-35 151.0 99 65.7
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 6.4e-35 150.6 99 65.7
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 6.4e-35 150.6 99 65.7
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 6.4e-35 150.6 99 66.7
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 6.4e-35 150.6 99 65.7
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 1.1e-34 149.8 98 66.3
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 1.4e-34 149.4 98 66.3
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 1.9e-34 149.1 99 65.7
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 1.9e-34 149.1 99 65.7
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 3.2e-34 148.3 98 64.3
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 7.1e-34 147.1 98 63.3
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 7.1e-34 147.1 98 63.3
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 7.1e-34 147.1 99 62.6
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 7.1e-34 147.1 99 63.6
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 1.2e-33 146.4 98 64.3
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 1.2e-33 146.4 98 64.3
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 1.2e-33 146.4 99 63.6
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 2.1e-33 145.6 99 62.6
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 2.1e-33 145.6 98 63.3
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 2.1e-33 145.6 99 63.6
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 2.1e-33 145.6 98 63.3
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 4.6e-33 144.4 99 63.6
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 4.6e-33 144.4 99 62.6
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 4.6e-33 144.4 99 62.6
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 4.6e-33 144.4 98 63.3
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 6.0e-33 144.1 99 63.6
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 7.8e-33 143.7 96 65.6
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.0e-32 143.3 99 61.6
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.0e-32 143.3 99 61.6
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 1.0e-32 143.3 99 61.6
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 1.3e-32 142.9 98 59.2
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 1.3e-32 142.9 99 61.6
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.3e-32 142.9 98 63.3
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 1.7e-32 142.5 99 63.6
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 1.7e-32 142.5 99 63.6
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 1.7e-32 142.5 99 63.6
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.7e-32 142.5 99 63.6
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 2.3e-32 142.1 99 61.6
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 3.0e-32 141.7 99 60.6
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 3.0e-32 141.7 99 62.6
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 3.9e-32 141.4 98 63.3
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 3.9e-32 141.4 98 63.3
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 3.9e-32 141.4 99 59.6
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 3.9e-32 141.4 98 63.3
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 5.1e-32 141.0 98 61.2
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 8.7e-32 140.2 99 59.6
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 8.7e-32 140.2 99 59.6
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 8.7e-32 140.2 99 60.6
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 1.5e-31 139.4 98 62.2
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.5e-31 139.4 98 63.3
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 1.9e-31 139.0 98 62.2
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 1.9e-31 139.0 98 62.2
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 5.6e-31 137.5 98 61.2
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 7.3e-31 137.1 98 61.2
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 7.3e-31 137.1 98 61.2
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 7.3e-31 137.1 98 61.2
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 7.3e-31 137.1 98 61.2
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 7.3e-31 137.1 98 61.2
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 9.6e-31 136.7 98 58.2
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 9.6e-31 136.7 98 61.2
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 1.3e-30 136.3 98 59.2
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 2.8e-30 135.2 99 58.6
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 2.8e-30 135.2 98 60.2
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 3.6e-30 134.8 99 58.6
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 4.8e-30 134.4 99 58.6
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 1.8e-29 132.5 99 57.6
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 4.0e-29 131.3 99 59.6
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 9.0e-29 130.2 99 56.6
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 4.4e-28 127.9 98 55.1
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 5.8e-28 127.5 98 55.1
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 8.4e-27 123.6 99 54.5
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 8.4e-27 123.6 99 54.5
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 8.4e-27 123.6 82 63.4
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 5.4e-26 120.9 89 59.6
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 2.1e-25 119.0 132 43.2
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 2.5e-23 112.1 99 52.5
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 7.3e-23 110.5 86 57.0
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 2.1e-22 109.0 108 47.2
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 2.4e-21 105.5 167 36.5
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 5.3e-21 104.4 71 60.6
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 3.4e-20 101.7 99 45.5
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 1.0e-16 90.1 100 45.0
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.5e-15 86.3 99 41.4
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 1.1e-10 70.1 48 58.3
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 1.2e-09 66.6 80 37.5
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 2.7e-09 65.5 38 65.8
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 2.7e-09 65.5 77 36.4
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 1.1e-07 60.1 30 76.7
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 2.1e-06 55.8 82 35.4
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 8.2e-06 53.9 38 57.9


User provided reference genes

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