Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6774 Trifolium pratense HOM05D006858 ORTHO05D008767 1.9e-37 158.7 79 100.0
Lalb_Chr10g0095481 Lupinus albus HOM05D006858 ORTHO05D008767 3.0e-11 71.6 80 51.2
Lj2g0007949 Lotus japonicus HOM05D006858 ORTHO05D008767 2.5e-10 68.6 82 52.4
RcHm_v2.0_Chr6g0258901 Rosa chinensis HOM05D006858 ORTHO05D008767 4.3e-10 67.8 65 56.9
VMungo1215G0504 Vigna mungo HOM05D006858 ORTHO05D008767 4.3e-10 67.8 80 48.8
Phvul.003G012700 Phaseolus vulgaris HOM05D006858 ORTHO05D008767 5.6e-10 67.4 64 54.7
Ca_12460_v3 Cicer arietinum L. HOM05D006858 ORTHO05D008767 9.6e-10 66.6 67 49.3
Ca_29767_v3 Cicer arietinum L. HOM05D006858 ORTHO05D008767 9.6e-10 66.6 67 49.3
Thhalv10027654m.g Eutrema salsugineum HOM05D006858 ORTHO05D008767 9.6e-10 66.6 64 54.7
RcHm_v2.0_Chr7g0233241 Rosa chinensis HOM05D006858 ORTHO05D008767 9.6e-10 66.6 65 55.4
Sp7g02300 Schrenkiella parvula HOM05D006858 ORTHO05D008767 1.3e-09 66.2 64 53.1
QL11p037400 Quercus lobata HOM05D006858 ORTHO05D008767 2.1e-09 65.5 65 52.3
C04p46110 Brassica napus HOM05D006858 ORTHO05D008767 2.8e-09 65.1 64 51.6
BolC4t26195H Brassica oleracea HOM05D006858 ORTHO05D008767 2.8e-09 65.1 64 51.6
CANSAT25G3187 Cannabis sativa HOM05D006858 ORTHO05D008767 2.8e-09 65.1 65 53.8
Cpa.g.sc62.38 Carica papaya HOM05D006858 ORTHO05D008767 2.8e-09 65.1 75 48.0
FvH4_2g06720 Fragaria vesca HOM05D006858 ORTHO05D008767 3.7e-09 64.7 65 53.8
FAN24G1409 Fragaria x ananassa HOM05D006858 ORTHO05D008767 3.7e-09 64.7 65 53.8
Manes.17G093600 Manihot esculenta HOM05D006858 ORTHO05D008767 3.7e-09 64.7 65 49.2
Lsat_1_v5_gn_5_113361 Lactuca sativa HOM05D006858 ORTHO05D008767 6.2e-09 63.9 65 52.3
TPR.G40260 Trifolium pratense HOM05D006858 ORTHO05D008767 6.2e-09 63.9 39 87.2
Atru.chr5.2775 Acer truncatum HOM05D006858 ORTHO05D008767 8.1e-09 63.5 65 53.8
AUR62011433 Chenopodium quinoa HOM05D006858 ORTHO05D008767 8.1e-09 63.5 65 53.8
DCAR_022059 Daucus carota HOM05D006858 ORTHO05D008767 8.1e-09 63.5 65 47.7
Glyma.20G010100 Glycine max HOM05D006858 ORTHO05D008767 8.1e-09 63.5 64 50.0
Gohir.D02G212500 Gossypium hirsutum HOM05D006858 ORTHO05D008767 8.1e-09 63.5 68 50.0
Gohir.A03G191600 Gossypium hirsutum HOM05D006858 ORTHO05D008767 1.1e-08 63.2 68 50.0
Cfa005452 Carpinus fangiana HOM05D006858 ORTHO05D008767 1.4e-08 62.8 65 52.3
ECA234G1772 Erigeron canadensis HOM05D006858 ORTHO05D008767 1.4e-08 62.8 65 50.8
FAN27G2753 Fragaria x ananassa HOM05D006858 ORTHO05D008767 1.4e-08 62.8 65 53.8
EL10Ac9g21827 Beta vulgaris HOM05D006858 ORTHO05D008767 1.8e-08 62.4 68 51.5
A04p12420 Brassica napus HOM05D006858 ORTHO05D008767 1.8e-08 62.4 64 50.0
BraA04t16905Z Brassica rapa HOM05D006858 ORTHO05D008767 1.8e-08 62.4 64 50.0
Dinv23584 Davidia involucrata HOM05D006858 ORTHO05D008767 1.8e-08 62.4 75 50.7
Potri.009G105600 Populus trichocarpa HOM05D006858 ORTHO05D008767 1.8e-08 62.4 76 44.7
AT5G39710 Arabidopsis thaliana HOM05D006858 ORTHO05D008767 2.4e-08 62.0 64 51.6
CiPaw.06G142100 Carya illinoinensis HOM05D006858 ORTHO05D008767 2.4e-08 62.0 65 52.3
Ciclev10028118m.g Citrus clementina HOM05D006858 ORTHO05D008767 2.4e-08 62.0 65 47.7
Lj9A359T74 Lonicera japonica HOM05D006858 ORTHO05D008767 2.4e-08 62.0 65 50.8
Sabra09G0080800 Salix brachista HOM05D006858 ORTHO05D008767 2.4e-08 62.0 76 43.4
THA.LOC104804370 Tarenaya hassleriana HOM05D006858 ORTHO05D008767 2.4e-08 62.0 65 49.2
arahy.Tifrunner.gnm1.ann1.3PJ361 Arachis hypogaea HOM05D006858 ORTHO05D008767 3.1e-08 61.6 80 42.5
arahy.Tifrunner.gnm1.ann1.U9N0YZ Arachis hypogaea HOM05D006858 ORTHO05D008767 3.1e-08 61.6 80 43.8
FAN20G2333 Fragaria x ananassa HOM05D006858 ORTHO05D008767 3.1e-08 61.6 65 53.8
Oeu013687.1 Olea europaea HOM05D006858 ORTHO05D008767 3.1e-08 61.6 65 49.2
PGR142G0738 Punica granatum HOM05D006858 ORTHO05D008767 3.1e-08 61.6 65 50.8
Ah.01g020130 Amaranthus hybridus HOM05D006858 ORTHO05D008767 4.0e-08 61.2 68 47.1
FAN15G2218 Fragaria x ananassa HOM05D006858 ORTHO05D008767 4.0e-08 61.2 65 52.3
HanXRQChr10g0303231 Helianthus annuus HOM05D006858 ORTHO05D008767 4.0e-08 61.2 65 47.7
TAR628G1172 Trochodendron aralioides HOM05D006858 ORTHO05D008767 4.0e-08 61.2 65 49.2
TAR633G1647 Trochodendron aralioides HOM05D006858 ORTHO05D008767 4.0e-08 61.2 65 49.2
BcaB06g27362 Brassica carinata HOM05D006858 ORTHO05D008767 5.3e-08 60.8 65 52.3
CSS0006454 Camellia sinensis var. sinensis HOM05D006858 ORTHO05D008767 5.3e-08 60.8 65 50.8
CSS0049463 Camellia sinensis var. sinensis HOM05D006858 ORTHO05D008767 5.3e-08 60.8 65 50.8
Prupe.7G039700 Prunus persica HOM05D006858 ORTHO05D008767 5.3e-08 60.8 65 49.2
Sc08g0000040 Simmondsia chinensis HOM05D006858 ORTHO05D008767 5.3e-08 60.8 65 46.2
AUR62016628 Chenopodium quinoa HOM05D006858 ORTHO05D008767 6.9e-08 60.5 65 50.8
Haze_01905 Corylus avellana HOM05D006858 ORTHO05D008767 9.0e-08 60.1 65 50.8
MD10G1090200 Malus domestica HOM05D006858 ORTHO05D008767 9.0e-08 60.1 65 52.3
TWI31G0517 Tripterygium wilfordii HOM05D006858 ORTHO05D008767 9.0e-08 60.1 65 49.2
Eucgr.I01171 Eucalyptus grandis HOM05D006858 ORTHO05D008767 1.2e-07 59.7 65 47.7
vmacro13394 Vaccinium macrocarpon HOM05D006858 ORTHO05D008767 1.2e-07 59.7 65 50.8
Aa31LG9G16400 Aethionema arabicum HOM05D006858 ORTHO05D008767 1.5e-07 59.3 64 50.0
Duzib132G0284 Durio zibethinus HOM05D006858 ORTHO05D008767 1.5e-07 59.3 65 47.7
Thecc.02G097300 Theobroma cacao HOM05D006858 ORTHO05D008767 3.4e-07 58.2 65 46.2
Medtr1g033960 Medicago truncatula HOM05D006858 ORTHO05D008767 1.3e-06 56.2 67 44.8
Aqoxy6G01416 Aquilegia oxysepala HOM05D006858 ORTHO05D008767 1.7e-06 55.8 63 47.6
Nitab4.5_0004334g0100 Nicotiana tabacum HOM05D006858 ORTHO05D008767 2.2e-06 55.5 66 43.9
Nitab4.5_0005583g0010 Nicotiana tabacum HOM05D006858 ORTHO05D008767 2.2e-06 55.5 66 43.9
Peaxi162Scf00016g00164 Petunia axillaris HOM05D006858 ORTHO05D008767 2.2e-06 55.5 65 44.6
TPR.G11140 Trifolium pratense HOM05D006858 ORTHO05D008767 2.2e-06 55.5 65 46.2
Nn4g22909 Nelumbo nucifera HOM05D006858 ORTHO05D008767 2.9e-06 55.1 65 46.2
Migut.N01200 Erythranthe guttata HOM05D006858 ORTHO05D008767 3.8e-06 54.7 64 42.2
Sopen01g050630 Solanum pennellii HOM05D006858 ORTHO05D008767 3.8e-06 54.7 65 43.1
PGSC0003DMG401025809 Solanum tuberosum HOM05D006858 ORTHO05D008767 3.8e-06 54.7 65 43.1
Rhsim05G0081400 Rhododendron simsii HOM05D006858 ORTHO05D008767 4.9e-06 54.3 65 46.2
Psat6g096520 Pisum sativum HOM05D006858 ORTHO05D008767 6.4e-06 53.9 67 43.3


User provided reference genes

Program Settings