Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 2.2e-194 682.2 359 100.0
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 7.7e-139 497.7 570 55.6
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 1.1e-137 493.8 569 54.0
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 5.5e-137 491.5 569 53.8
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 9.4e-129 464.2 567 51.0
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 4.7e-128 461.8 570 51.6
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 4.7e-128 461.8 570 51.6
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 1.4e-127 460.3 569 51.5
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 3.7e-125 452.2 569 50.1
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 2.4e-124 449.5 571 49.7
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 2.9e-122 442.6 569 50.4
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 1.2e-115 420.6 568 47.7
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 1.2e-115 420.6 570 46.8
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 1.6e-115 420.2 568 47.0
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 7.7e-115 417.9 532 50.6
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 1.3e-114 417.2 571 47.8
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 8.5e-114 414.5 570 46.5
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 1.5e-113 413.7 571 47.1
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.9e-113 413.3 570 46.7
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 2.5e-113 412.9 529 49.5
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 4.2e-113 412.1 570 46.8
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 5.5e-113 411.8 570 46.8
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 7.2e-113 411.4 570 46.1
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 9.4e-113 411.0 568 46.0
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 1.2e-112 410.6 568 46.3
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 1.2e-112 410.6 570 46.5
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 3.6e-112 409.1 558 47.7
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 8.0e-112 407.9 568 46.7
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.4e-111 407.1 569 46.6
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 2.3e-111 406.4 568 45.6
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 3.0e-111 406.0 568 46.7
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 5.2e-111 405.2 569 46.4
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 1.2e-110 404.1 570 44.9
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 1.2e-110 404.1 570 45.4
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 1.2e-110 404.1 568 45.6
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 3.4e-110 402.5 570 45.3
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.3e-109 400.6 570 46.0
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.7e-109 400.2 570 45.8
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 2.2e-109 399.8 589 44.7
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 2.2e-109 399.8 583 45.3
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 3.7e-109 399.1 570 45.4
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 6.3e-109 398.3 565 44.6
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.8e-108 396.7 568 46.5
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 2.4e-108 396.4 572 45.1
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 2.4e-108 396.4 570 45.6
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 2.0e-107 393.3 569 44.6
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 2.0e-107 393.3 530 48.3
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 3.5e-107 392.5 571 44.8
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 5.9e-107 391.7 563 44.4
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 7.7e-107 391.3 568 45.1
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 1.7e-106 390.2 595 43.5
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 6.6e-106 388.3 568 44.0
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 1.1e-105 387.5 568 44.5
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 1.9e-105 386.7 570 43.9
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 3.3e-105 386.0 571 43.8
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 4.2e-105 385.6 591 44.0
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 4.2e-105 385.6 568 44.4
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 9.5e-105 384.4 564 44.5
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 2.1e-104 383.3 564 45.2
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 2.8e-104 382.9 564 45.2
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 3.6e-104 382.5 553 45.6
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 8.0e-104 381.3 568 44.7
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 1.0e-103 380.9 571 44.0
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 2.3e-103 379.8 566 44.9
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 3.0e-103 379.4 561 44.2
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.2e-103 378.6 569 44.3
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 1.2e-102 377.5 577 43.2
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 1.5e-102 377.1 570 43.9
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 2.0e-102 376.7 564 44.0
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 1.3e-101 374.0 564 43.3
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 2.8e-101 372.9 595 41.7
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 3.7e-101 372.5 593 41.8
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 2.4e-100 369.8 587 42.8
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 3.1e-100 369.4 543 44.4
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 3.5e-99 365.9 507 47.3
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 5.9e-99 365.2 519 46.1
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 1.0e-98 364.4 570 42.8
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 2.3e-98 363.2 570 42.5
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 6.6e-98 361.7 570 42.6
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 1.5e-97 360.5 569 41.8
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 1.5e-97 360.5 568 41.7
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 1.9e-97 360.1 568 41.9
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 5.6e-97 358.6 559 42.4
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 7.3e-97 358.2 571 42.0
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 1.2e-96 357.5 526 44.7
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 1.6e-96 357.1 565 41.9
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 2.8e-96 356.3 570 42.1
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 2.8e-96 356.3 571 41.7
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 1.4e-95 354.0 570 41.6
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 4.0e-95 352.4 559 41.7
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 4.0e-95 352.4 557 41.8
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 1.5e-94 350.5 558 41.4
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 2.0e-94 350.1 558 41.4
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 2.0e-94 350.1 571 41.3
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 1.7e-93 347.1 557 41.1
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 1.1e-92 344.4 524 43.3
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 1.2e-91 340.9 573 40.1
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 4.6e-91 339.0 569 40.8
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 2.3e-90 336.7 555 40.5
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 1.1e-89 334.3 570 40.0
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.6e-88 330.5 496 44.2
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 3.6e-88 329.3 556 39.4
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 3.1e-87 326.2 556 39.4
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 6.8e-87 325.1 558 39.2
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 6.8e-87 325.1 558 39.2
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.5e-86 323.9 558 40.1
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 2.0e-86 323.6 559 38.8
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 9.8e-86 321.2 506 42.5
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 2.9e-85 319.7 528 41.9
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 6.0e-83 312.0 307 59.0
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 1.2e-80 304.3 507 40.6
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 1.2e-78 297.7 318 55.7
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 5.8e-78 295.4 456 44.7
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 2.2e-77 293.5 551 37.4
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 2.9e-77 293.1 565 36.5
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 2.1e-72 276.9 557 36.3
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 6.2e-72 275.4 325 50.8
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 1.4e-68 264.2 448 42.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 3.2e-68 263.1 297 52.9
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 7.1e-68 261.9 579 34.7
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 6.6e-66 255.4 318 49.1
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 1.1e-60 238.0 547 34.0
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 2.3e-58 230.3 571 32.4
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 1.5e-57 227.6 588 31.6
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 7.4e-49 198.7 444 34.7
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 2.1e-48 197.2 352 38.6
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 8.1e-48 195.3 328 39.6
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 9.0e-47 191.8 310 45.5
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 2.7e-43 180.3 529 31.9
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 9.6e-41 171.8 191 55.5
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 1.1e-39 168.3 242 45.9
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 3.1e-39 166.8 573 28.6
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 1.5e-38 164.5 115 73.9
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 2.0e-38 164.1 144 61.8
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 1.0e-37 161.8 125 68.8
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 5.0e-37 159.5 110 68.2
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 2.5e-33 147.1 108 66.7
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 2.4e-31 140.6 142 59.2
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 6.7e-26 122.5 114 57.9
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 8.2e-24 115.5 90 62.2
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 3.1e-23 113.6 274 33.9
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 5.3e-15 86.3 204 33.8
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 4.5e-14 83.2 96 45.8
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.0e-13 82.0 78 52.6
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 2.9e-13 80.5 53 64.2
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 3.2e-12 77.0 78 51.3
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 8.8e-10 68.9 72 58.3
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 3.7e-08 63.5 55 60.0


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