Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G674 Trifolium pratense HOM05D005365 ORTHO05D006910 2.5e-124 449.1 258 100.0
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 1.0e-109 400.6 257 82.5
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 7.5e-105 384.4 248 81.5
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 7.5e-105 384.4 248 81.5
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 6.3e-104 381.3 251 84.5
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 1.8e-95 353.2 258 72.1
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 1.3e-93 347.1 258 72.5
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 2.1e-91 339.7 202 83.2
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 1.8e-90 336.7 258 70.5
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 6.8e-90 334.7 255 70.6
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 1.5e-89 333.6 258 69.4
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 6.3e-88 328.2 253 70.8
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 3.6e-83 312.4 257 74.3
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 3.2e-71 272.7 257 59.5
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 5.4e-71 271.9 248 59.3
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 7.0e-71 271.6 256 59.8
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 4.6e-70 268.9 258 58.9
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 1.9e-68 263.5 259 57.1
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 5.6e-68 261.9 270 61.9
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 1.6e-67 260.4 251 56.2
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 2.1e-67 260.0 257 56.8
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 2.1e-67 260.0 261 55.9
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 2.3e-66 256.5 254 57.9
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 8.9e-66 254.6 259 56.0
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 2.0e-65 253.4 260 54.2
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 2.6e-65 253.1 255 55.7
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 7.5e-65 251.5 255 55.3
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 1.3e-64 250.8 259 59.1
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 2.9e-64 249.6 259 53.3
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 2.9e-64 249.6 202 61.4
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 4.9e-64 248.8 250 56.4
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 6.4e-64 248.4 252 54.8
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 1.9e-63 246.9 252 61.5
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 7.1e-63 245.0 202 60.9
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 2.7e-62 243.0 256 55.1
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 4.6e-62 242.3 256 52.3
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 7.8e-62 241.5 257 59.5
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 2.3e-61 240.0 260 51.5
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 2.5e-60 236.5 260 53.1
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 2.5e-60 236.5 260 53.1
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 5.6e-60 235.3 259 52.1
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 2.4e-58 229.9 258 53.9
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 6.8e-58 228.4 252 50.4
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 8.9e-58 228.0 253 51.4
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 3.4e-57 226.1 253 50.6
Actinidia17204 Actinidia chinensis HOM05D005365 ORTHO05D006910 7.6e-57 224.9 204 57.8
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 9.9e-57 224.6 253 50.2
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 1.7e-56 223.8 249 56.2
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 6.4e-56 221.9 248 51.2
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 6.4e-56 221.9 204 58.8
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 1.4e-55 220.7 261 52.9
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 1.9e-55 220.3 247 52.6
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 1.9e-55 220.3 257 51.4
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 1.2e-54 217.6 257 51.0
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 4.6e-54 215.7 259 49.0
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 7.8e-54 214.9 257 49.8
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 7.8e-54 214.9 261 52.5
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 1.3e-53 214.2 250 50.8
PGSC0003DMG400013306 Solanum tuberosum HOM05D005365 ORTHO05D006910 1.3e-53 214.2 257 52.1
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 1.7e-53 213.8 248 48.8
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 3.9e-53 212.6 259 52.5
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 3.3e-52 209.5 249 50.2
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 3.3e-52 209.5 258 46.1
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 9.6e-52 208.0 250 48.8
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 1.2e-51 207.6 243 51.0
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 3.6e-51 206.1 252 52.0
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 6.2e-51 205.3 247 53.0
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 3.1e-50 203.0 249 57.0
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 5.2e-50 202.2 247 51.8
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 7.6e-49 198.4 249 45.4
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 9.9e-49 198.0 262 51.1
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 9.9e-49 198.0 262 52.3
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 1.3e-48 197.6 255 47.1
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 4.9e-48 195.7 169 59.8
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 2.1e-46 190.3 259 49.8
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 3.5e-46 189.5 258 46.1
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 6.0e-46 188.7 258 46.5
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 1.7e-45 187.2 263 49.0
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 2.3e-45 186.8 262 49.6
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 1.1e-44 184.5 264 49.2
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 1.9e-44 183.7 260 47.3
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 1.9e-44 183.7 260 47.3
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 1.9e-44 183.7 170 58.2
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 5.6e-44 182.2 272 45.2
HPP92_006139 Vanilla planifolia HOM05D005365 ORTHO05D006910 2.8e-43 179.9 252 50.0
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 1.1e-42 177.9 260 46.5
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 1.4e-42 177.6 267 43.8
Os06g0256000 Oryza sativa ssp. japonica HOM05D005365 ORTHO05D006910 2.6e-41 173.3 258 43.4
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 5.8e-41 172.2 264 45.1
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 5.8e-41 172.2 264 45.1
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 5.8e-41 172.2 264 45.1
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 1.3e-40 171.0 258 46.1
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 1.3e-40 171.0 202 49.5
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 2.2e-40 170.2 251 44.2
Thhalv10027679m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 1.1e-39 167.9 259 46.7
SEGI_16018 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 2.8e-35 153.3 254 40.9
CAN.G691.4 Capsicum annuum HOM05D005365 ORTHO05D006910 1.8e-26 124.0 141 51.1
GSVIVG01038363001 Vitis vinifera HOM05D005365 ORTHO05D006910 6.0e-22 109.0 86 62.8
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 5.1e-21 105.9 257 33.1
SGA_v2.0_scaffold45G17195 Striga asiatica HOM05D005365 ORTHO05D006910 1.1e-18 98.2 164 40.9
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 1.5e-17 94.4 175 36.6
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 3.0e-13 80.1 133 39.8
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 8.8e-13 78.6 83 50.6
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-10 68.9 201 29.9
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 2.0e-09 67.4 187 32.6
Sabra17G0109200 Salix brachista HOM05D005365 ORTHO05D349400 2.7e-06 57.0 71 46.5


User provided reference genes

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