Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6719 Trifolium pratense HOM05D000439 ORTHO05D001363 9.9e-64 246.5 116 100.0
Ca_23161_v3 Cicer arietinum L. HOM05D000439 ORTHO05D001363 3.4e-48 194.9 117 82.9
Psat4g208400 Pisum sativum HOM05D000439 ORTHO05D001363 5.0e-47 191.0 116 79.3
Medtr8g010170 Medicago truncatula HOM05D000439 ORTHO05D001363 2.7e-45 185.3 116 77.6
Glyma.03G096300 Glycine max HOM05D000439 ORTHO05D001363 3.0e-44 181.8 116 76.7
Phvul.010G036000 Phaseolus vulgaris HOM05D000439 ORTHO05D001363 4.8e-42 174.5 117 73.5
Psat4g208360 Pisum sativum HOM05D000439 ORTHO05D001363 4.8e-42 174.5 118 74.6
VMungo0331G1725 Vigna mungo HOM05D000439 ORTHO05D001363 8.2e-42 173.7 117 74.4
Ca_23160_v3 Cicer arietinum L. HOM05D000439 ORTHO05D001363 1.8e-41 172.6 117 75.2
Medtr8g010160 Medicago truncatula HOM05D000439 ORTHO05D001363 1.8e-41 172.6 118 72.9
VMungo0331G1716 Vigna mungo HOM05D000439 ORTHO05D001363 2.4e-41 172.2 117 72.6
Glyma.03G096400 Glycine max HOM05D000439 ORTHO05D001363 5.3e-41 171.0 117 73.5
QL09p045391 Quercus lobata HOM05D000439 ORTHO05D001363 1.2e-40 169.9 115 71.3
Phvul.010G035900 Phaseolus vulgaris HOM05D000439 ORTHO05D001363 2.0e-40 169.1 116 71.6
arahy.Tifrunner.gnm1.ann1.WFFD1N Arachis hypogaea HOM05D000439 ORTHO05D001363 2.6e-40 168.7 116 69.8
TPR.G17382 Trifolium pratense HOM05D000439 ORTHO05D001363 4.5e-40 167.9 118 71.2
CiPaw.13G055900 Carya illinoinensis HOM05D000439 ORTHO05D001363 7.7e-40 167.2 116 69.8
Lalb_Chr13g0290941 Lupinus albus HOM05D000439 ORTHO05D001363 1.0e-39 166.8 117 71.8
Manes.12G055300 Manihot esculenta HOM05D000439 ORTHO05D001363 1.0e-39 166.8 116 71.6
arahy.Tifrunner.gnm1.ann1.0C3V8Z Arachis hypogaea HOM05D000439 ORTHO05D001363 1.7e-39 166.0 103 76.7
Glyma.16G079100 Glycine max HOM05D000439 ORTHO05D001363 2.2e-39 165.6 117 70.1
Lalb_Chr12g0210231 Lupinus albus HOM05D000439 ORTHO05D001363 2.2e-39 165.6 117 71.8
GSVIVG01001527001 Vitis vinifera HOM05D000439 ORTHO05D001363 2.5e-38 162.2 116 69.8
Thecc.01G207100 Theobroma cacao HOM05D000439 ORTHO05D001363 5.5e-38 161.0 116 69.0
Duzib211G0280 Durio zibethinus HOM05D000439 ORTHO05D001363 7.2e-38 160.6 116 69.8
TAR636G0600 Trochodendron aralioides HOM05D000439 ORTHO05D001363 7.2e-38 160.6 116 69.8
Ciclev10014710m.g Citrus clementina HOM05D000439 ORTHO05D001363 9.4e-38 160.2 116 68.1
Duzib133G1231 Durio zibethinus HOM05D000439 ORTHO05D001363 9.4e-38 160.2 116 69.8
TWI36G0610 Tripterygium wilfordii HOM05D000439 ORTHO05D001363 2.1e-37 159.1 110 70.0
CANSAT25G1996 Cannabis sativa HOM05D000439 ORTHO05D001363 6.1e-37 157.5 117 67.5
Dinv07626 Davidia involucrata HOM05D000439 ORTHO05D001363 6.1e-37 157.5 118 67.8
TAR365G1139 Trochodendron aralioides HOM05D000439 ORTHO05D001363 7.9e-37 157.1 116 68.1
Lalb_Chr07g0194651 Lupinus albus HOM05D000439 ORTHO05D001363 1.0e-36 156.8 117 69.2
COL.COLO4_34278 Corchorus olitorius HOM05D000439 ORTHO05D001363 1.8e-36 156.0 116 69.8
Cfa010575 Carpinus fangiana HOM05D000439 ORTHO05D001363 3.0e-36 155.2 118 68.6
Haze_03509 Corylus avellana HOM05D000439 ORTHO05D001363 3.0e-36 155.2 118 68.6
TWI18G0174 Tripterygium wilfordii HOM05D000439 ORTHO05D001363 3.9e-36 154.8 116 67.2
CANSAT25G0025 Cannabis sativa HOM05D000439 ORTHO05D001363 6.7e-36 154.1 117 66.7
Cpa.g.sc8.34 Carica papaya HOM05D000439 ORTHO05D001363 1.1e-35 153.3 118 66.1
Gohir.A07G089400 Gossypium hirsutum HOM05D000439 ORTHO05D001363 1.1e-35 153.3 116 66.4
Gohir.D07G094200 Gossypium hirsutum HOM05D000439 ORTHO05D001363 1.1e-35 153.3 116 66.4
ClCG09G008320 Citrullus lanatus HOM05D000439 ORTHO05D001363 1.5e-35 152.9 118 68.6
Gorai.001G101100 Gossypium raimondii HOM05D000439 ORTHO05D001363 2.6e-35 152.1 116 65.5
Sed0020305 Sechium edule HOM05D000439 ORTHO05D001363 9.7e-35 150.2 118 66.9
CsaV3_7G026740 Cucumis sativus L. HOM05D000439 ORTHO05D001363 2.2e-34 149.1 119 68.1
FvH4_2g17450 Fragaria vesca HOM05D000439 ORTHO05D001363 2.2e-34 149.1 117 64.1
MD10G1147800 Malus domestica HOM05D000439 ORTHO05D001363 2.8e-34 148.7 117 65.0
MELO3C021129.2 Cucumis melo HOM05D000439 ORTHO05D001363 3.7e-34 148.3 118 67.8
Prupe.8G186800 Prunus persica HOM05D000439 ORTHO05D001363 6.3e-34 147.5 117 65.0
FAN15G3302 Fragaria x ananassa HOM05D000439 ORTHO05D001363 1.1e-33 146.7 117 63.2
FAN27G1832 Fragaria x ananassa HOM05D000439 ORTHO05D001363 1.1e-33 146.7 117 63.2
RcHm_v2.0_Chr6g0282181 Rosa chinensis HOM05D000439 ORTHO05D001363 1.4e-33 146.4 117 64.1
Sed0018459 Sechium edule HOM05D000439 ORTHO05D001363 1.4e-33 146.4 118 66.1
DCAR_004776 Daucus carota HOM05D000439 ORTHO05D001363 4.1e-33 144.8 116 62.9
Potri.014G175200 Populus trichocarpa HOM05D000439 ORTHO05D001363 4.1e-33 144.8 109 65.1
Sabra02G0182700 Salix brachista HOM05D000439 ORTHO05D001363 5.3e-33 144.4 116 62.1
Cc01_g15840 Coffea canephora HOM05D000439 ORTHO05D001363 7.0e-33 144.1 116 61.2
TWI75G0610 Tripterygium wilfordii HOM05D000439 ORTHO05D001363 1.5e-32 142.9 116 63.8
CSS0005902 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 2.0e-32 142.5 117 65.0
CSS0033281 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 2.0e-32 142.5 117 65.0
Lj3g0012498 Lotus japonicus HOM05D000439 ORTHO05D001363 2.6e-32 142.1 121 66.9
Actinidia34529 Actinidia chinensis HOM05D000439 ORTHO05D001363 3.5e-32 141.7 117 62.4
Aqoxy5G00428 Aquilegia oxysepala HOM05D000439 ORTHO05D001363 3.5e-32 141.7 116 65.5
Gohir.A07G195500 Gossypium hirsutum HOM05D000439 ORTHO05D001363 3.5e-32 141.7 116 62.9
Duzib138G0503 Durio zibethinus HOM05D000439 ORTHO05D001363 7.7e-32 140.6 117 62.4
Sabra14G0134000 Salix brachista HOM05D000439 ORTHO05D001363 1.0e-31 140.2 104 65.4
Nitab4.5_0007516g0020 Nicotiana tabacum HOM05D000439 ORTHO05D001363 1.7e-31 139.4 116 60.3
Hma1.2p1_1368F.1_g278480 Hydrangea macrophylla HOM05D000439 ORTHO05D001363 5.0e-31 137.9 120 63.3
vmacro14686 Vaccinium macrocarpon HOM05D000439 ORTHO05D001363 5.0e-31 137.9 118 61.9
Gohir.D07G202100 Gossypium hirsutum HOM05D000439 ORTHO05D001363 8.5e-31 137.1 116 62.1
Nitab4.5_0000038g0370 Nicotiana tabacum HOM05D000439 ORTHO05D001363 3.2e-30 135.2 116 59.5
Nn1g09496 Nelumbo nucifera HOM05D000439 ORTHO05D001363 5.5e-30 134.4 116 62.9
Rhsim01G0247400 Rhododendron simsii HOM05D000439 ORTHO05D001363 5.5e-30 134.4 118 61.9
Gorai.001G227000 Gossypium raimondii HOM05D000439 ORTHO05D001363 9.4e-30 133.7 116 62.1
Peaxi162Scf00372g00049 Petunia axillaris HOM05D000439 ORTHO05D001363 1.6e-29 132.9 116 61.2
Atru.chr6.3515 Acer truncatum HOM05D000439 ORTHO05D001363 3.6e-29 131.7 123 64.2
Sopen06g002530 Solanum pennellii HOM05D000439 ORTHO05D001363 3.6e-29 131.7 117 59.8
EL10Ac5g10583 Beta vulgaris HOM05D000439 ORTHO05D001363 4.7e-29 131.3 113 61.1
MD05G1153400 Malus domestica HOM05D000439 ORTHO05D001363 4.7e-29 131.3 117 61.5
PSO732G0458 Papaver somniferum HOM05D000439 ORTHO05D001363 6.1e-29 131.0 117 61.5
Hma1.2p1_1043F.1_g251270 Hydrangea macrophylla HOM05D000439 ORTHO05D001363 8.0e-29 130.6 120 61.7
Peaxi162Scf02239g00023 Petunia axillaris HOM05D000439 ORTHO05D001363 8.0e-29 130.6 116 56.9
PSO675G8931 Papaver somniferum HOM05D000439 ORTHO05D001363 1.0e-28 130.2 117 60.7
PGSC0003DMG400020655 Solanum tuberosum HOM05D000439 ORTHO05D001363 2.3e-28 129.0 117 59.8
DCAR_018608 Daucus carota HOM05D000439 ORTHO05D001363 3.0e-28 128.6 116 56.9
Solyc06g007640.3 Solanum lycopersicum HOM05D000439 ORTHO05D001363 3.0e-28 128.6 117 59.0
Solyc06g082930.3 Solanum lycopersicum HOM05D000439 ORTHO05D001363 3.0e-28 128.6 116 59.5
MSTRG.12742 Avicennia marina HOM05D000439 ORTHO05D001363 1.1e-27 126.7 116 53.4
PGSC0003DMG400027670 Solanum tuberosum HOM05D000439 ORTHO05D001363 1.1e-27 126.7 116 58.6
CAN.G874.40 Capsicum annuum HOM05D000439 ORTHO05D001363 2.6e-27 125.6 116 57.8
Lj1A104T55 Lonicera japonica HOM05D000439 ORTHO05D001363 2.6e-27 125.6 121 62.8
Nitab4.5_0001348g0110 Nicotiana tabacum HOM05D000439 ORTHO05D001363 2.6e-27 125.6 116 58.6
Sopen06g034320 Solanum pennellii HOM05D000439 ORTHO05D001363 2.6e-27 125.6 116 58.6
Nitab4.5_0011859g0010 Nicotiana tabacum HOM05D000439 ORTHO05D001363 3.3e-27 125.2 118 60.2
MBI10_g23580_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 4.4e-27 124.8 110 62.7
CAN.G181.41 Capsicum annuum HOM05D000439 ORTHO05D001363 5.7e-27 124.4 118 58.5
AUR62008064 Chenopodium quinoa HOM05D000439 ORTHO05D001363 9.7e-27 123.6 116 58.6
Nitab4.5_0002311g0140 Nicotiana tabacum HOM05D000439 ORTHO05D001363 2.2e-26 122.5 118 59.3
MSTRG.17959 Avicennia marina HOM05D000439 ORTHO05D001363 4.8e-26 121.3 116 53.4
ECA248G0108 Erigeron canadensis HOM05D000439 ORTHO05D001363 6.3e-26 120.9 120 58.3
Nitab4.5_0014403g0010 Nicotiana tabacum HOM05D000439 ORTHO05D001363 6.3e-26 120.9 115 57.4
Ah.02g111020 Amaranthus hybridus HOM05D000439 ORTHO05D001363 1.8e-25 119.4 115 56.5
TAR362G0828 Trochodendron aralioides HOM05D000439 ORTHO05D001363 1.8e-25 119.4 116 56.0
ECA236G1511 Erigeron canadensis HOM05D000439 ORTHO05D001363 2.4e-25 119.0 119 57.1
AUR62028641 Chenopodium quinoa HOM05D000439 ORTHO05D001363 4.1e-25 118.2 115 56.5
Eucgr.K02358 Eucalyptus grandis HOM05D000439 ORTHO05D001363 1.3e-23 113.2 108 52.8
Lsat_1_v5_gn_5_176500 Lactuca sativa HOM05D000439 ORTHO05D001363 2.2e-23 112.5 126 56.3
Peaxi162Scf01242g00033 Petunia axillaris HOM05D000439 ORTHO05D001363 1.1e-22 110.2 117 53.0
SalBow3G1228 Salvia bowleyana HOM05D000439 ORTHO05D001363 1.1e-22 110.2 120 50.8
ATR0743G156 Amborella trichopoda HOM05D000439 ORTHO05D001363 1.9e-22 109.4 130 50.8
CiPaw.14G044300 Carya illinoinensis HOM05D000439 ORTHO05D001363 1.9e-22 109.4 116 54.3
HanXRQChr01g0010571 Helianthus annuus HOM05D000439 ORTHO05D001363 7.2e-22 107.5 120 56.7
HanXRQChr01g0014151 Helianthus annuus HOM05D000439 ORTHO05D001363 1.2e-21 106.7 120 53.3
Lj2C1111T3 Lonicera japonica HOM05D000439 ORTHO05D001363 1.6e-21 106.3 99 57.6
SalBow3G0791 Salvia bowleyana HOM05D000439 ORTHO05D001363 1.6e-21 106.3 116 50.9
Hund09486 Selenicereus undatus HOM05D000439 ORTHO05D001363 1.6e-21 106.3 126 51.6
Migut.N00680 Erythranthe guttata HOM05D000439 ORTHO05D001363 3.6e-21 105.1 124 53.2
PGR083G1451 Punica granatum HOM05D000439 ORTHO05D001363 4.7e-21 104.8 132 51.5
Sc17g0001560 Simmondsia chinensis HOM05D000439 ORTHO05D001363 2.3e-20 102.4 115 57.4
Lsat_1_v5_gn_8_98521 Lactuca sativa HOM05D000439 ORTHO05D001363 5.2e-20 101.3 124 48.4
SGA_v2.0_scaffold77G25310 Striga asiatica HOM05D000439 ORTHO05D001363 1.5e-19 99.8 118 50.8
Os09g0248300 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D001363 3.4e-19 98.6 116 50.0
MSTRG.18507 Avicennia marina HOM05D000439 ORTHO05D001363 4.4e-19 98.2 113 46.0
Zm00001eb094390 Zea mays HOM05D000439 ORTHO05D001363 4.4e-19 98.2 116 48.3
Migut.D00771 Erythranthe guttata HOM05D000439 ORTHO05D001363 1.7e-18 96.3 129 49.6
BraA02t08729Z Brassica rapa HOM05D000439 ORTHO05D001363 2.4e-17 92.4 110 47.3
CDE08G0271 Ceratophyllum demersum HOM05D000439 ORTHO05D001363 4.1e-17 91.7 119 52.1
HanXRQChr10g0281241 Helianthus annuus HOM05D000439 ORTHO05D001363 7.0e-17 90.9 120 50.0
PGR044G1627 Punica granatum HOM05D000439 ORTHO05D001363 1.2e-16 90.1 113 46.0
BcaC03g17648 Brassica carinata HOM05D000439 ORTHO05D001363 1.6e-16 89.7 111 50.5
C02p56490 Brassica napus HOM05D000439 ORTHO05D001363 1.6e-16 89.7 111 50.5
BolC2t11708H Brassica oleracea HOM05D000439 ORTHO05D001363 1.6e-16 89.7 111 50.5
THA.LOC104822460 Tarenaya hassleriana HOM05D000439 ORTHO05D001363 2.7e-16 89.0 111 53.2
Aa31LG3G2860 Aethionema arabicum HOM05D000439 ORTHO05D001363 2.2e-15 85.9 118 47.5
A02p37430 Brassica napus HOM05D000439 ORTHO05D001363 3.8e-15 85.1 110 46.4
A09p04410 Brassica napus HOM05D000439 ORTHO05D001363 1.5e-14 83.2 116 47.4
A09p04460 Brassica napus HOM05D000439 ORTHO05D001363 1.5e-14 83.2 116 47.4
BraA09t36078Z Brassica rapa HOM05D000439 ORTHO05D001363 1.5e-14 83.2 116 47.4
SGA_v2.0_scaffold95G28698 Striga asiatica HOM05D000439 ORTHO05D001363 1.9e-14 82.8 117 47.0
BcaC06g30802 Brassica carinata HOM05D000439 ORTHO05D001363 2.5e-14 82.4 117 49.6
C09p04770 Brassica napus HOM05D000439 ORTHO05D001363 2.5e-14 82.4 113 46.9
AL8G21190 Arabidopsis lyrata HOM05D000439 ORTHO05D001363 7.2e-14 80.9 121 48.8
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 3.6e-13 78.6 114 46.5
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 4.7e-13 78.2 118 45.8
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 4.7e-13 78.2 118 45.8
Thhalv10003930m.g Eutrema salsugineum HOM05D000439 ORTHO05D001363 1.0e-12 77.0 123 43.9
Os09g0248200 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D001363 8.8e-12 73.9 98 49.0
THA.LOC104819013 Tarenaya hassleriana HOM05D000439 ORTHO05D001363 1.5e-11 73.2 108 48.1
unitig_0.g226 Utricularia gibba HOM05D000439 ORTHO05D001363 1.5e-11 73.2 124 39.5
C09p04720 Brassica napus HOM05D000439 ORTHO05D001363 3.4e-11 72.0 118 44.9
BolC9t53400H Brassica oleracea HOM05D000439 ORTHO05D001363 3.4e-11 72.0 118 44.9
unitig_60.g25694 Utricularia gibba HOM05D000439 ORTHO05D001363 2.7e-08 62.4 91 40.7
TAR625G0925 Trochodendron aralioides HOM05D000439 ORTHO05D001363 6.6e-07 57.8 141 39.0
AagrBONN_evm.TU.Sc2ySwM_344.4515 Anthoceros agrestis HOM05D000439 ORTHO05D001363 1.5e-06 56.6 151 37.7
Pp3c26_11270 Physcomitrium patens HOM05D000439 ORTHO05D001363 1.5e-06 56.6 157 36.3
MBI16_g15950_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 1.9e-06 56.2 120 40.8
CARHR183810 Cardamine hirsuta HOM05D000439 ORTHO05D001363 2.5e-06 55.8 111 37.8
Lsat_1_v5_gn_5_58860 Lactuca sativa HOM05D000439 ORTHO05D001363 7.2e-06 54.3 37 73.0
AT5G48385 Arabidopsis thaliana HOM05D000439 ORTHO05D001363 9.5e-06 53.9 112 35.7
Sp2g18740 Schrenkiella parvula HOM05D000439 ORTHO05D001363 9.5e-06 53.9 109 35.8


User provided reference genes

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