Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 4.2e-62 241.1 117 100.0
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 7.4e-59 230.3 117 94.9
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 2.4e-57 225.3 117 92.3
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 5.9e-56 220.7 117 89.7
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 5.0e-55 217.6 117 88.9
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 3.2e-54 214.9 117 86.3
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 7.2e-54 213.8 116 87.1
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 9.4e-54 213.4 116 86.2
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 1.6e-53 212.6 117 85.5
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 1.6e-53 212.6 116 86.2
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 2.1e-53 212.2 117 86.3
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 3.6e-53 211.5 114 86.8
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 6.1e-53 210.7 118 85.6
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 1.8e-52 209.1 117 81.2
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 3.0e-52 208.4 118 84.7
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 5.2e-52 207.6 118 84.7
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 6.7e-52 207.2 117 85.5
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 6.7e-52 207.2 116 85.3
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 6.7e-52 207.2 114 85.1
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 8.8e-52 206.8 115 85.2
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 8.8e-52 206.8 116 83.6
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 1.2e-51 206.5 116 84.5
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 1.2e-51 206.5 116 82.8
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 1.5e-51 206.1 117 81.2
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 1.5e-51 206.1 114 83.3
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 2.6e-51 205.3 116 83.6
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.6e-51 205.3 116 83.6
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 3.3e-51 204.9 117 82.1
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 3.3e-51 204.9 117 82.1
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 3.3e-51 204.9 117 82.1
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 3.3e-51 204.9 115 81.7
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 3.3e-51 204.9 117 78.6
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 4.4e-51 204.5 115 81.7
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 4.4e-51 204.5 115 82.6
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 4.4e-51 204.5 115 82.6
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 4.4e-51 204.5 115 82.6
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 5.7e-51 204.1 116 81.9
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 7.5e-51 203.8 115 81.7
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 9.7e-51 203.4 116 82.8
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 1.3e-50 203.0 116 82.8
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 1.3e-50 203.0 116 84.5
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 1.7e-50 202.6 116 81.0
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 2.2e-50 202.2 116 80.2
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 2.2e-50 202.2 115 84.3
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 2.2e-50 202.2 115 80.9
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.8e-50 201.8 116 81.9
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 2.8e-50 201.8 116 81.0
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 3.7e-50 201.4 116 83.6
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 3.7e-50 201.4 119 83.2
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 3.7e-50 201.4 119 83.2
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 4.8e-50 201.1 116 83.6
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 4.8e-50 201.1 116 83.6
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 6.3e-50 200.7 116 79.3
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 6.3e-50 200.7 116 79.3
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 6.3e-50 200.7 115 83.5
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 6.3e-50 200.7 113 85.0
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 8.2e-50 200.3 116 81.9
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 8.2e-50 200.3 114 80.7
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 1.4e-49 199.5 119 79.8
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 2.4e-49 198.7 115 82.6
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 3.1e-49 198.4 116 80.2
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 3.1e-49 198.4 114 80.7
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 4.1e-49 198.0 116 77.6
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 5.3e-49 197.6 116 80.2
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 7.0e-49 197.2 114 81.6
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 9.1e-49 196.8 123 78.0
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 1.2e-48 196.4 119 81.5
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 1.2e-48 196.4 118 81.4
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 2.0e-48 195.7 116 79.3
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 2.2e-47 192.2 127 74.8
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 2.9e-47 191.8 117 74.4
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 3.8e-47 191.4 112 79.5
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 8.5e-47 190.3 115 77.4
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.1e-46 189.9 116 77.6
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 1.5e-46 189.5 117 78.6
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 1.9e-46 189.1 96 94.8
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 3.2e-46 188.3 114 77.2
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 3.2e-46 188.3 114 78.1
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 3.2e-46 188.3 167 58.1
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 3.2e-46 188.3 128 71.1
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 5.5e-46 187.6 114 77.2
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 5.5e-46 187.6 114 77.2
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 5.5e-46 187.6 114 77.2
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 5.5e-46 187.6 114 77.2
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 5.5e-46 187.6 118 74.6
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 7.2e-46 187.2 117 75.2
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 7.2e-46 187.2 117 75.2
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 7.2e-46 187.2 117 75.2
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 7.2e-46 187.2 117 75.2
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 7.2e-46 187.2 117 75.2
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 1.6e-45 186.0 114 76.3
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 1.6e-45 186.0 114 76.3
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 2.1e-45 185.7 114 76.3
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 2.1e-45 185.7 114 76.3
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 2.1e-45 185.7 114 76.3
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 2.1e-45 185.7 114 76.3
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 2.1e-45 185.7 113 77.0
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 2.7e-45 185.3 114 77.2
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 2.7e-45 185.3 114 75.4
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 2.7e-45 185.3 116 74.1
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 3.6e-45 184.9 117 71.8
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 3.6e-45 184.9 117 74.4
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 4.7e-45 184.5 114 78.1
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 4.7e-45 184.5 114 75.4
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 4.7e-45 184.5 114 75.4
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 4.7e-45 184.5 117 77.8
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 6.1e-45 184.1 112 75.9
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 8.0e-45 183.7 114 75.4
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 1.4e-44 183.0 114 74.6
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 1.4e-44 183.0 115 72.2
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 2.3e-44 182.2 114 74.6
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 6.8e-44 180.6 113 77.0
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 2.6e-43 178.7 115 69.6
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 2.6e-43 178.7 115 69.6
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 3.4e-43 178.3 117 70.1
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 9.8e-43 176.8 117 72.6
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 6.3e-42 174.1 98 83.7
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 6.3e-42 174.1 98 83.7
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.8e-41 172.6 99 82.8
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 7.0e-41 170.6 116 72.4
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 2.0e-40 169.1 119 74.8
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 5.9e-40 167.5 100 80.0
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 1.0e-39 166.8 130 64.6
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 1.3e-39 166.4 112 70.5
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 5.5e-38 161.0 97 78.4
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 7.2e-38 160.6 97 77.3
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 7.2e-38 160.6 121 67.8
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 1.6e-37 159.5 101 73.3
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 7.5e-35 150.6 98 72.4
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 1.3e-34 149.8 97 76.3
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 1.3e-34 149.8 114 60.5
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 2.2e-34 149.1 110 60.0
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 3.5e-32 141.7 112 57.1
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 1.1e-30 136.7 100 68.0
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 1.2e-29 133.3 95 70.5
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 6.1e-29 131.0 114 51.8
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 2.0e-24 115.9 117 53.0
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 5.0e-23 111.3 63 82.5
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 1.9e-22 109.4 65 81.5
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 3.3e-22 108.6 80 63.8
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 5.6e-22 107.8 59 83.1
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 2.1e-21 105.9 57 86.0
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 3.6e-21 105.1 118 50.0
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 6.2e-21 104.4 63 79.4
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 6.2e-21 104.4 52 92.3
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 1.8e-20 102.8 156 43.6
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 2.3e-20 102.4 53 86.8
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 2.3e-20 102.4 63 77.8
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.1e-20 102.1 63 73.0
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 6.8e-20 100.9 59 79.7
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 6.8e-20 100.9 59 78.0
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 1.5e-19 99.8 50 92.0
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 2.0e-19 99.4 61 73.8
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 5.8e-19 97.8 51 84.3
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 9.8e-19 97.1 70 68.6
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 5.4e-17 91.3 134 38.8
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 3.9e-15 85.1 136 36.0
Glyma.08G020100 Glycine max HOM05D001461 ORTHO05D005534 6.8e-12 74.3 53 71.7
Solyc07g061860.3 Solanum lycopersicum HOM05D001461 ORTHO05D051078 2.2e-10 69.3 70 48.6
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 1.0e-07 60.5 35 80.0


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