Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G657 Trifolium pratense HOM05D000542 ORTHO05D000202 5.2e-25 116.7 51 100.0
Medtr8g045880 Medicago truncatula HOM05D000542 ORTHO05D000202 1.6e-21 105.1 51 88.2
Medtr8g045890 Medicago truncatula HOM05D000542 ORTHO05D000202 3.5e-21 104.0 51 84.3
TPR.G28253 Trifolium pratense HOM05D000542 ORTHO05D000202 1.6e-18 95.1 51 80.4
Medtr8g445170 Medicago truncatula HOM05D000542 ORTHO05D000202 2.8e-18 94.4 51 76.5
Psat4g181720 Pisum sativum HOM05D000542 ORTHO05D000202 6.2e-18 93.2 51 70.6
Ca_12263_v3 Cicer arietinum L. HOM05D000542 ORTHO05D000202 2.4e-17 91.3 51 74.5
Ca_30551_v3 Cicer arietinum L. HOM05D000542 ORTHO05D000202 2.4e-17 91.3 51 74.5
Medtr8g046000 Medicago truncatula HOM05D000542 ORTHO05D000202 6.8e-17 89.7 51 76.5
Psat7g045280 Pisum sativum HOM05D000542 ORTHO05D000202 6.8e-17 89.7 52 73.1
Psat4g221080 Pisum sativum HOM05D000542 ORTHO05D000202 1.2e-16 89.0 51 72.5
Psat4g181120 Pisum sativum HOM05D000542 ORTHO05D000202 1.5e-16 88.6 51 74.5
Psat4g181440 Pisum sativum HOM05D000542 ORTHO05D000202 2.6e-16 87.8 51 80.4
Psat4g181680 Pisum sativum HOM05D000542 ORTHO05D000202 4.4e-16 87.0 51 70.6
Psat3g189000 Pisum sativum HOM05D000542 ORTHO05D000202 7.6e-16 86.3 51 70.6
Psat4g181320 Pisum sativum HOM05D000542 ORTHO05D000202 9.9e-16 85.9 51 76.5
Psat4g186960 Pisum sativum HOM05D000542 ORTHO05D000202 9.9e-16 85.9 51 76.5
TPR.G30261 Trifolium pratense HOM05D000542 ORTHO05D000202 1.3e-15 85.5 51 72.5
Ca_31237_v3 Cicer arietinum L. HOM05D000542 ORTHO05D000202 4.9e-15 83.6 46 76.1
Medtr1g045860 Medicago truncatula HOM05D000542 ORTHO05D000202 6.4e-15 83.2 51 70.6
Phvul.011G182200 Phaseolus vulgaris HOM05D000542 ORTHO05D000202 1.1e-14 82.4 43 76.7
Ca_05747_v3 Cicer arietinum L. HOM05D000542 ORTHO05D000202 1.4e-14 82.0 51 72.5
TPR.G36570 Trifolium pratense HOM05D000542 ORTHO05D000202 3.2e-14 80.9 48 68.8
Glyma.08G230600 Glycine max HOM05D000542 ORTHO05D000202 4.2e-14 80.5 51 70.6
Psat0s5597g0040 Pisum sativum HOM05D000542 ORTHO05D000202 7.1e-14 79.7 51 64.7
Psat4g185360 Pisum sativum HOM05D000542 ORTHO05D000202 7.1e-14 79.7 51 64.7
Ca_05746_v3 Cicer arietinum L. HOM05D000542 ORTHO05D000202 2.1e-13 78.2 51 68.6
VMungo1127G1835 Vigna mungo HOM05D000542 ORTHO05D000202 2.1e-13 78.2 43 72.1
Psat0s4403g0040 Pisum sativum HOM05D000542 ORTHO05D000202 2.7e-13 77.8 51 68.6
Ca_05748_v3 Cicer arietinum L. HOM05D000542 ORTHO05D000202 4.6e-13 77.0 51 66.7
Medtr8g445140 Medicago truncatula HOM05D000542 ORTHO05D000202 4.6e-13 77.0 37 78.4
Ca_30482_v3 Cicer arietinum L. HOM05D000542 ORTHO05D000202 6.0e-13 76.6 51 66.7
Psat2g048360 Pisum sativum HOM05D000542 ORTHO05D000202 1.7e-12 75.1 40 77.5
Psat2g048320 Pisum sativum HOM05D000542 ORTHO05D023781 3.9e-12 73.9 37 78.4
arahy.Tifrunner.gnm1.ann1.441Z8B Arachis hypogaea HOM05D000542 ORTHO05D000202 8.1e-10 66.2 37 70.3
arahy.Tifrunner.gnm1.ann1.3I6GZV Arachis hypogaea HOM05D000542 ORTHO05D000202 4.0e-09 63.9 37 67.6
arahy.Tifrunner.gnm1.ann1.SPMS6A Arachis hypogaea HOM05D000542 ORTHO05D000202 4.0e-09 63.9 37 67.6
arahy.Tifrunner.gnm1.ann1.KXJ4AK Arachis hypogaea HOM05D000542 ORTHO05D000202 9.0e-09 62.8 37 64.9
TPR.G18705 Trifolium pratense HOM05D000542 ORTHO05D000202 2.0e-08 61.6 30 80.0
TPR.G33142 Trifolium pratense HOM05D000542 ORTHO05D000202 2.0e-08 61.6 45 55.6
Glyma.12G217400 Glycine max HOM05D000542 ORTHO05D000202 4.4e-08 60.5 37 62.2
Medtr2g081610 Medicago truncatula HOM05D000542 ORTHO05D000202 5.8e-08 60.1 37 59.5
Psat4g181600 Pisum sativum HOM05D000542 ORTHO05D000202 7.6e-08 59.7 37 64.9
VMungo0899G0001 Vigna mungo HOM05D000542 ORTHO05D000202 3.8e-07 57.4 37 56.8
Glyma.12G217300 Glycine max HOM05D000542 ORTHO05D000202 4.9e-07 57.0 37 56.8
Prupe.1G475100 Prunus persica HOM05D000542 ORTHO05D000202 8.4e-07 56.2 38 57.9
Prupe.1G475800 Prunus persica HOM05D000542 ORTHO05D000202 8.4e-07 56.2 38 57.9
Prupe.1G465600 Prunus persica HOM05D000542 ORTHO05D000202 1.1e-06 55.8 38 55.3
Prupe.1G475400 Prunus persica HOM05D000542 ORTHO05D000202 1.1e-06 55.8 38 57.9
Thecc.09G242600 Theobroma cacao HOM05D000542 ORTHO05D000202 1.1e-06 55.8 38 55.3
Medtr2g081590 Medicago truncatula HOM05D000542 ORTHO05D000202 1.9e-06 55.1 37 54.1
MD04G1018200 Malus domestica HOM05D000542 ORTHO05D000202 2.4e-06 54.7 37 59.5
MD15G1098800 Malus domestica HOM05D000542 ORTHO05D000202 2.4e-06 54.7 38 60.5
Prupe.1G477800 Prunus persica HOM05D000542 ORTHO05D000202 2.4e-06 54.7 38 57.9
Glyma.13G283900 Glycine max HOM05D000542 ORTHO05D000202 3.2e-06 54.3 37 54.1
Prupe.1G475300 Prunus persica HOM05D000542 ORTHO05D000202 3.2e-06 54.3 38 55.3
Ciclev10008742m.g Citrus clementina HOM05D000542 ORTHO05D000202 5.4e-06 53.5 43 46.5
Medtr2g081770 Medicago truncatula HOM05D000542 ORTHO05D000202 7.1e-06 53.1 39 56.4
GSVIVG01035703001 Vitis vinifera HOM05D000542 ORTHO05D000202 7.1e-06 53.1 38 60.5
arahy.Tifrunner.gnm1.ann1.VT6DM9 Arachis hypogaea HOM05D000542 ORTHO05D000202 9.3e-06 52.8 51 41.2
Manes.03G066380 Manihot esculenta HOM05D000542 ORTHO05D000202 9.3e-06 52.8 38 55.3
GSVIVG01035693001 Vitis vinifera HOM05D000542 ORTHO05D000202 9.3e-06 52.8 39 46.2


User provided reference genes

Program Settings