Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 9.0e-96 353.6 180 100.0
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 3.2e-85 318.5 165 98.2
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.1e-69 266.9 167 81.4
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 4.6e-68 261.5 169 79.3
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 3.9e-67 258.5 165 78.2
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 5.9e-55 218.0 169 66.9
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 8.5e-54 214.2 163 69.3
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 8.8e-51 204.1 165 64.8
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 7.0e-48 194.5 168 60.1
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 6.7e-43 177.9 170 55.9
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 8.8e-43 177.6 172 57.0
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 1.5e-42 176.8 169 56.2
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 5.7e-42 174.9 172 54.1
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 7.5e-42 174.5 167 57.5
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 7.5e-42 174.5 169 54.4
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 9.7e-42 174.1 169 55.6
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 1.7e-41 173.3 181 54.1
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 2.2e-41 172.9 173 56.1
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 3.7e-41 172.2 166 56.6
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 3.7e-41 172.2 174 55.7
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 6.3e-41 171.4 169 54.4
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 1.4e-40 170.2 163 55.8
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 1.4e-40 170.2 181 54.7
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 1.8e-40 169.9 168 54.2
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 3.1e-40 169.1 166 56.0
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 3.1e-40 169.1 166 56.0
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 5.3e-40 168.3 167 54.5
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 9.1e-40 167.5 169 51.5
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.2e-39 167.2 171 53.2
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 2.0e-39 166.4 170 55.9
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 4.5e-39 165.2 174 50.0
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 7.7e-39 164.5 171 54.4
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 7.7e-39 164.5 171 52.6
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 7.7e-39 164.5 174 49.4
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 1.3e-38 163.7 164 52.4
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 1.3e-38 163.7 164 52.4
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 1.3e-38 163.7 175 54.3
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 2.2e-38 162.9 172 50.6
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 6.5e-38 161.4 164 54.3
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 1.5e-37 160.2 164 51.8
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 1.5e-37 160.2 164 51.8
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 1.5e-37 160.2 164 51.8
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 2.5e-37 159.5 164 51.2
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 9.4e-37 157.5 175 51.4
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 1.2e-36 157.1 164 51.2
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.2e-36 157.1 174 51.7
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 2.7e-36 156.0 174 50.6
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 4.7e-36 155.2 174 50.0
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 8.0e-36 154.5 169 47.3
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 8.0e-36 154.5 166 51.8
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.8e-35 153.3 167 50.3
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 3.0e-35 152.5 169 48.5
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 3.0e-35 152.5 168 50.0
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 4.0e-35 152.1 172 46.5
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 4.0e-35 152.1 170 47.6
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 4.0e-35 152.1 168 50.6
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 4.0e-35 152.1 168 49.4
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 5.2e-35 151.8 159 52.8
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 8.8e-35 151.0 168 49.4
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 8.8e-35 151.0 175 48.6
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 1.2e-34 150.6 168 48.2
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 4.4e-34 148.7 166 47.6
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 4.4e-34 148.7 169 49.7
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 4.4e-34 148.7 165 46.1
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 5.7e-34 148.3 168 48.2
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 7.5e-34 147.9 169 48.5
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 9.8e-34 147.5 153 50.3
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 1.3e-33 147.1 153 49.7
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 1.3e-33 147.1 173 45.7
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 1.3e-33 147.1 172 46.5
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 8.3e-33 144.4 168 47.6
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 4.1e-32 142.1 174 46.0
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 5.9e-31 138.3 163 46.0
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.7e-30 136.7 170 44.1
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 2.3e-30 136.3 172 43.0
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 6.5e-30 134.8 167 43.7
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 3.2e-29 132.5 164 48.2
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 5.5e-29 131.7 139 48.9
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 1.2e-28 130.6 168 45.8
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 1.2e-28 130.6 157 45.9
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 3.6e-28 129.0 166 43.4
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 6.1e-28 128.3 164 42.7
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 2.2e-25 119.8 167 41.3
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 2.4e-24 116.3 127 50.4
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 7.0e-24 114.8 165 44.2
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 2.7e-23 112.8 141 46.1
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 2.7e-23 112.8 164 41.5
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 3.5e-23 112.5 164 41.5
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 1.3e-22 110.5 164 41.5
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 5.0e-22 108.6 167 40.7
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 8.6e-22 107.8 138 37.7
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 5.6e-21 105.1 144 41.0
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 2.8e-20 102.8 127 42.5
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 2.0e-18 96.7 167 37.1
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 5.0e-14 82.0 148 36.5
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 6.2e-12 75.1 103 37.9
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 8.0e-12 74.7 137 32.8
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 4.0e-11 72.4 131 34.4
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.0e-10 70.1 137 32.8
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 4.4e-10 68.9 177 32.8
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 8.6e-06 54.7 67 44.8


User provided reference genes

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