Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 1.3e-84 316.6 195 100.0
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 3.4e-56 222.2 202 73.8
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 1.7e-47 193.4 209 60.3
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 1.6e-42 176.8 209 62.7
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 6.0e-37 158.3 206 64.1
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 1.5e-35 153.7 213 55.4
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 9.6e-35 151.0 206 59.7
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 9.0e-33 144.4 222 52.3
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 1.2e-32 144.1 204 57.8
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 2.0e-32 143.3 222 51.8
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 5.8e-32 141.7 242 44.2
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 3.8e-31 139.0 234 48.3
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 1.9e-30 136.7 238 47.1
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 9.3e-30 134.4 216 45.8
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 1.2e-29 134.0 224 50.0
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.6e-29 133.7 240 45.4
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 2.7e-29 132.9 242 45.0
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 2.7e-29 132.9 249 45.0
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 7.8e-29 131.3 223 48.9
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.0e-28 131.0 233 40.8
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 1.0e-28 131.0 208 54.8
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 6.6e-28 128.3 235 48.1
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 6.6e-28 128.3 230 44.8
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 9.6e-27 124.4 222 44.1
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 2.8e-26 122.9 224 41.5
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 6.2e-26 121.7 217 49.8
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 8.1e-26 121.3 207 43.5
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 2.6e-24 116.3 220 44.1
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.3e-23 114.0 208 43.3
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 4.2e-22 109.0 211 42.2
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 7.1e-22 108.2 222 43.2
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.2e-21 107.5 222 37.8
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 6.0e-21 105.1 221 46.2
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 7.9e-21 104.8 222 43.7
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.0e-20 104.4 222 37.4
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 2.3e-20 103.2 231 42.0
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 3.0e-20 102.8 241 35.3
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 5.1e-20 102.1 237 39.7
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 7.4e-19 98.2 226 39.4
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 9.6e-19 97.8 224 40.6
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 1.6e-18 97.1 226 37.6
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 4.8e-18 95.5 228 43.4
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 6.2e-18 95.1 213 44.1
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 8.1e-18 94.7 210 45.7
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 1.1e-17 94.4 213 39.4
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 1.8e-17 93.6 220 47.3
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 3.1e-17 92.8 256 38.3
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 9.0e-17 91.3 256 41.0
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 9.0e-17 91.3 208 38.5
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 1.2e-16 90.9 231 35.5
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 4.5e-16 89.0 207 39.1
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 5.8e-16 88.6 190 35.3
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 7.6e-16 88.2 221 37.6
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 7.6e-16 88.2 207 34.8
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.7e-15 87.0 226 35.4
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 2.9e-15 86.3 215 34.4
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 4.9e-15 85.5 240 40.0
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 6.4e-15 85.1 209 34.0
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 1.1e-14 84.3 208 35.6
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 1.1e-14 84.3 208 35.6
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 1.1e-14 84.3 208 35.6
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 1.4e-14 84.0 171 40.9
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 1.9e-14 83.6 200 39.5
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 2.4e-14 83.2 243 36.2
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 3.2e-14 82.8 235 39.1
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 4.2e-14 82.4 161 37.3
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 4.2e-14 82.4 246 35.0
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 1.2e-13 80.9 230 38.3
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 2.1e-13 80.1 216 32.9
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 2.7e-13 79.7 234 30.8
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 4.6e-13 79.0 161 41.0
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 6.0e-13 78.6 167 42.5
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 7.9e-13 78.2 154 44.2
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 1.8e-12 77.0 233 40.3
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 3.9e-12 75.9 110 48.2
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.9e-11 73.6 225 36.9
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 4.3e-11 72.4 157 45.9
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 5.6e-11 72.0 202 33.7
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 8.2e-10 68.2 244 33.2
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 9.0e-09 64.7 110 43.6
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 9.0e-09 64.7 206 34.0
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.0e-08 63.5 220 32.3
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 4.5e-08 62.4 246 33.3
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 5.8e-08 62.0 175 36.0
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 7.6e-08 61.6 139 38.1
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 2.2e-07 60.1 92 47.8
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 1.1e-06 57.8 172 34.3
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 1.1e-06 57.8 172 34.3
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 1.9e-06 57.0 231 37.2
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 5.5e-06 55.5 211 32.2
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 7.1e-06 55.1 172 34.3


User provided reference genes

Program Settings