Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 1.3e-42 176.0 90 100.0
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 6.4e-42 173.7 90 96.7
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 2.4e-41 171.8 90 95.6
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 6.0e-40 167.2 90 93.3
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.0e-39 166.4 90 93.3
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 3.9e-39 164.5 88 92.0
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 7.3e-38 160.2 90 86.7
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 9.5e-38 159.8 88 88.6
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.3e-36 155.2 86 87.2
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.2e-35 152.9 86 83.7
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 1.5e-35 152.5 87 81.6
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 1.5e-35 152.5 90 78.9
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 2.0e-35 152.1 86 83.7
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.0e-35 152.1 86 83.7
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 2.6e-35 151.8 86 82.6
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 7.5e-35 150.2 86 80.2
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 76.7
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 76.7
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 9.8e-35 149.8 90 76.7
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.3e-34 149.4 90 75.6
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 1.3e-34 149.4 86 81.4
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 2.2e-34 148.7 90 76.7
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 2.2e-34 148.7 90 75.6
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.9e-34 148.3 84 86.9
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 2.9e-34 148.3 90 76.7
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 3.7e-34 147.9 88 79.5
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 4.9e-34 147.5 90 77.8
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 4.9e-34 147.5 90 76.7
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 4.9e-34 147.5 86 80.2
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 1.4e-33 146.0 90 75.6
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 75.6
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 73.3
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 1.9e-33 145.6 90 75.6
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 74.4
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.4e-33 145.2 90 73.3
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 3.2e-33 144.8 89 76.4
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 3.2e-33 144.8 90 74.4
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 4.1e-33 144.4 88 78.4
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 4.1e-33 144.4 90 76.7
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 73.3
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 73.3
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 75.6
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 5.4e-33 144.1 86 80.2
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 73.3
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 7.0e-33 143.7 86 80.2
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 73.3
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 1.2e-32 142.9 90 72.2
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.2e-32 142.9 90 72.2
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.2e-32 142.9 90 75.6
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 1.6e-32 142.5 86 76.7
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 73.3
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 73.3
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 72.2
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 2.1e-32 142.1 86 76.7
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 2.1e-32 142.1 90 71.1
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.1e-32 142.1 99 71.7
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 2.7e-32 141.7 90 71.1
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 2.7e-32 141.7 90 71.1
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 2.7e-32 141.7 90 71.1
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 4.6e-32 141.0 84 77.4
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 4.6e-32 141.0 90 72.2
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 71.1
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 71.1
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 70.0
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.3e-31 139.4 86 74.4
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 1.3e-31 139.4 87 72.4
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 1.3e-31 139.4 86 75.6
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 71.1
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 70.0
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 72.2
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 70.0
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 68.9
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 70.0
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 3.9e-31 137.9 90 68.9
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 8.6e-31 136.7 86 74.4
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 8.6e-31 136.7 90 72.2
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 8.6e-31 136.7 90 73.3
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.9e-30 135.6 70 97.1
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 2.5e-30 135.2 86 74.4
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 67.8
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 4.3e-30 134.4 90 66.7
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 4.3e-30 134.4 88 73.9
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 64.4
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 66.7
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.2e-29 132.9 91 70.3
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.2e-29 132.9 91 70.3
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 2.1e-29 132.1 86 67.4
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 2.1e-29 132.1 88 67.0
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 2.1e-29 132.1 90 67.8
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 2.8e-29 131.7 90 64.4
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 3.6e-29 131.3 91 70.3
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 4.7e-29 131.0 120 55.8
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 6.2e-29 130.6 97 64.9
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 1.4e-28 129.4 72 84.7
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 1.8e-28 129.0 70 88.6
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.3e-28 128.6 70 87.1
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 2.3e-28 128.6 90 61.1
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 2.3e-28 128.6 88 65.9
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 6.8e-28 127.1 94 67.0
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 8.9e-28 126.7 97 67.0
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 1.2e-27 126.3 84 70.2
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 3.4e-27 124.8 88 69.3
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 5.8e-27 124.0 90 64.4
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 1.7e-26 122.5 86 66.3
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 1.1e-25 119.8 69 79.7
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.4e-25 119.4 66 87.9
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.2e-24 116.3 70 74.3
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 2.3e-23 112.1 72 75.0
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 2.3e-23 112.1 63 81.0
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 5.6e-22 107.5 68 73.5
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.6e-21 105.9 71 70.4
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 6.2e-21 104.0 68 67.6
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.1e-20 103.2 69 65.2
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.4e-20 102.8 57 82.5
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 5.2e-20 100.9 59 78.0
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 5.8e-19 97.4 90 54.4
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 7.6e-19 97.1 77 64.9
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.3e-18 96.3 71 69.0
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 2.3e-15 85.5 62 71.0
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 5.6e-14 80.9 53 77.4
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 1.2e-13 79.7 93 43.0
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 3.6e-13 78.2 90 47.8
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.8e-08 60.5 47 61.7
arahy.Tifrunner.gnm1.ann1.DI5ISS Arachis hypogaea HOM05D006090 ORTHO05D038896 5.1e-07 57.8 41 70.7
arahy.Tifrunner.gnm1.ann1.3U8U6D Arachis hypogaea HOM05D054567 ORTHO05D007600 1.9e-06 55.8 33 75.8


User provided reference genes

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