Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 2.4e-102 375.6 197 100.0
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 2.5e-14 83.2 48 85.4
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 2.5e-14 83.2 48 87.5
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 5.5e-14 82.0 48 85.4
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 7.2e-14 81.6 48 85.4
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 7.2e-14 81.6 48 85.4
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 1.2e-13 80.9 48 83.3
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 1.2e-13 80.9 48 83.3
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 2.1e-13 80.1 48 83.3
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 3.6e-13 79.3 48 81.2
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 4.7e-13 79.0 48 81.2
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 4.7e-13 79.0 48 83.3
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 6.1e-13 78.6 48 83.3
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 1.0e-12 77.8 48 81.2
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 1.0e-12 77.8 48 81.2
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 1.4e-12 77.4 48 83.3
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 1.4e-12 77.4 48 81.2
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 1.8e-12 77.0 48 81.2
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 1.8e-12 77.0 48 79.2
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 1.8e-12 77.0 48 81.2
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 2.3e-12 76.6 48 81.2
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 3.0e-12 76.3 48 81.2
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 3.0e-12 76.3 48 81.2
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 3.0e-12 76.3 48 79.2
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 3.0e-12 76.3 48 79.2
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 5.2e-12 75.5 48 79.2
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 5.2e-12 75.5 48 79.2
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 6.7e-12 75.1 48 79.2
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 6.7e-12 75.1 48 77.1
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 6.7e-12 75.1 48 77.1
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 6.7e-12 75.1 48 79.2
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 8.8e-12 74.7 48 79.2
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 8.8e-12 74.7 48 77.1
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.8e-12 74.7 48 77.1
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.8e-12 74.7 48 77.1
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.8e-12 74.7 48 77.1
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 1.1e-11 74.3 48 79.2
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 1.1e-11 74.3 48 77.1
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 1.5e-11 73.9 48 75.0
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 1.5e-11 73.9 48 79.2
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.5e-11 73.9 48 77.1
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.0e-11 73.6 48 75.0
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 2.0e-11 73.6 48 77.1
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 2.6e-11 73.2 48 77.1
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.6e-11 73.2 48 75.0
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.6e-11 73.2 48 75.0
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 2.6e-11 73.2 48 77.1
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 2.6e-11 73.2 48 75.0
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 3.3e-11 72.8 48 75.0
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 3.3e-11 72.8 48 77.1
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 4.4e-11 72.4 48 77.1
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 4.4e-11 72.4 48 75.0
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 5.7e-11 72.0 47 76.6
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 5.7e-11 72.0 48 75.0
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 5.7e-11 72.0 48 77.1
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 5.7e-11 72.0 48 77.1
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 5.7e-11 72.0 48 77.1
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 5.7e-11 72.0 48 77.1
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 5.7e-11 72.0 48 77.1
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 5.7e-11 72.0 48 77.1
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 7.4e-11 71.6 48 75.0
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 7.4e-11 71.6 48 75.0
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 7.4e-11 71.6 48 75.0
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 7.4e-11 71.6 48 75.0
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 9.7e-11 71.2 48 75.0
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 9.7e-11 71.2 48 75.0
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 9.7e-11 71.2 48 72.9
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 9.7e-11 71.2 48 72.9
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 1.3e-10 70.9 48 72.9
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 1.3e-10 70.9 48 72.9
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 1.3e-10 70.9 48 70.8
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 1.3e-10 70.9 48 70.8
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 1.7e-10 70.5 48 70.8
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 1.7e-10 70.5 48 75.0
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 2.2e-10 70.1 48 72.9
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 3.7e-10 69.3 87 51.7
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 4.8e-10 68.9 48 70.8
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 6.3e-10 68.6 48 72.9
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 6.3e-10 68.6 48 70.8
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 6.3e-10 68.6 48 70.8
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 6.3e-10 68.6 48 70.8
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 6.3e-10 68.6 48 72.9
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 8.2e-10 68.2 48 72.9
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 8.2e-10 68.2 48 72.9
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 8.2e-10 68.2 48 70.8
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 8.2e-10 68.2 48 72.9
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 8.2e-10 68.2 87 50.6
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 8.2e-10 68.2 48 68.8
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 1.1e-09 67.8 48 68.8
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 1.1e-09 67.8 48 68.8
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 1.1e-09 67.8 48 68.8
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 1.1e-09 67.8 48 70.8
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 1.4e-09 67.4 48 70.8
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 1.4e-09 67.4 87 50.6
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 1.4e-09 67.4 48 70.8
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 1.8e-09 67.0 48 70.8
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 1.8e-09 67.0 48 70.8
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 1.8e-09 67.0 48 70.8
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 1.8e-09 67.0 66 60.6
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 2.4e-09 66.6 48 68.8
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 3.1e-09 66.2 48 68.8
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 3.1e-09 66.2 48 68.8
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 4.1e-09 65.9 48 68.8
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 4.1e-09 65.9 48 68.8
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 4.1e-09 65.9 48 68.8
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 4.1e-09 65.9 48 68.8
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 4.1e-09 65.9 48 66.7
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 7.0e-09 65.1 48 68.8
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 7.0e-09 65.1 48 66.7
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 7.0e-09 65.1 48 66.7
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 1.2e-08 64.3 48 66.7
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 1.2e-08 64.3 48 66.7
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 1.2e-08 64.3 48 66.7
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 1.2e-08 64.3 48 66.7
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-08 64.3 47 63.8
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 3.5e-08 62.8 48 66.7
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 4.5e-08 62.4 48 64.6
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 4.5e-08 62.4 48 64.6
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 4.5e-08 62.4 48 64.6
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 2.2e-07 60.1 43 65.1
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 1.9e-06 57.0 48 62.5
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 2.5e-06 56.6 41 65.9
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 4.2e-06 55.8 48 60.4
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 7.2e-06 55.1 48 60.4
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 9.4e-06 54.7 48 60.4


User provided reference genes

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