Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G627 Trifolium pratense HOM05D006669 ORTHO05D008440 1.5e-71 272.7 131 100.0
TPR.G20965 Trifolium pratense HOM05D006669 ORTHO05D008440 7.3e-71 270.4 131 99.2
Ca_24710_v3 Cicer arietinum L. HOM05D006669 ORTHO05D008440 1.1e-61 240.0 131 89.3
Medtr5g016110 Medicago truncatula HOM05D006669 ORTHO05D008440 5.8e-60 234.2 131 87.8
Psat0s1712g0160 Pisum sativum HOM05D006669 ORTHO05D008440 4.6e-57 224.6 130 83.8
Lj2g0024438 Lotus japonicus HOM05D006669 ORTHO05D008440 1.5e-52 209.5 131 73.3
Glyma.01G191500 Glycine max HOM05D006669 ORTHO05D008440 4.6e-49 198.0 131 72.5
Lalb_Chr09g0323441 Lupinus albus HOM05D006669 ORTHO05D008440 4.6e-49 198.0 131 70.2
arahy.Tifrunner.gnm1.ann1.37Y375 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.7e-48 196.1 129 69.8
arahy.Tifrunner.gnm1.ann1.QDP4K1 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.7e-48 196.1 129 69.8
Glyma.11G050600 Glycine max HOM05D006669 ORTHO05D008440 5.1e-48 194.5 131 71.0
Phvul.002G013400 Phaseolus vulgaris HOM05D006669 ORTHO05D008440 1.8e-45 186.0 131 69.5
VMungo1215G2631 Vigna mungo HOM05D006669 ORTHO05D008440 3.1e-45 185.3 126 70.6
Ciclev10027520m.g Citrus clementina HOM05D006669 ORTHO05D008440 1.2e-36 156.8 129 58.1
Lj4C159G4 Lonicera japonica HOM05D006669 ORTHO05D008440 2.6e-36 155.6 124 57.3
Atru.chr3.203 Acer truncatum HOM05D006669 ORTHO05D008440 7.6e-36 154.1 131 55.7
Haze_15316 Corylus avellana HOM05D006669 ORTHO05D008440 2.2e-35 152.5 130 56.9
Oeu040598.1 Olea europaea HOM05D006669 ORTHO05D008440 8.4e-35 150.6 131 57.3
Actinidia21236 Actinidia chinensis HOM05D006669 ORTHO05D008440 4.2e-34 148.3 129 58.1
Actinidia16443 Actinidia chinensis HOM05D006669 ORTHO05D008440 7.1e-34 147.5 129 58.1
CiPaw.02G004600 Carya illinoinensis HOM05D006669 ORTHO05D008440 7.1e-34 147.5 130 56.2
Manes.12G112200 Manihot esculenta HOM05D006669 ORTHO05D008440 7.1e-34 147.5 131 55.0
Aqoxy6G02742 Aquilegia oxysepala HOM05D006669 ORTHO05D008440 9.3e-34 147.1 120 55.8
GSVIVG01000155001 Vitis vinifera HOM05D006669 ORTHO05D008440 9.3e-34 147.1 129 52.7
RcHm_v2.0_Chr2g0107341 Rosa chinensis HOM05D006669 ORTHO05D008440 1.2e-33 146.7 128 56.2
Sp7g35160 Schrenkiella parvula HOM05D006669 ORTHO05D008440 2.1e-33 146.0 129 55.8
TAR381G0156 Trochodendron aralioides HOM05D006669 ORTHO05D008440 2.7e-33 145.6 124 56.5
Prupe.6G224500 Prunus persica HOM05D006669 ORTHO05D008440 6.0e-33 144.4 129 55.8
Gohir.D03G027000 Gossypium hirsutum HOM05D006669 ORTHO05D008440 7.9e-33 144.1 131 56.5
MD15G1293100 Malus domestica HOM05D006669 ORTHO05D008440 7.9e-33 144.1 125 55.2
Thhalv10024891m.g Eutrema salsugineum HOM05D006669 ORTHO05D008440 1.0e-32 143.7 129 53.5
Gorai.003G028700 Gossypium raimondii HOM05D006669 ORTHO05D008440 1.0e-32 143.7 131 58.0
CARHR245880 Cardamine hirsuta HOM05D006669 ORTHO05D008440 1.3e-32 143.3 129 55.0
Duzib147G0464 Durio zibethinus HOM05D006669 ORTHO05D008440 1.7e-32 142.9 131 56.5
FAN26G1063 Fragaria x ananassa HOM05D006669 ORTHO05D008440 2.3e-32 142.5 121 57.0
C03p79320 Brassica napus HOM05D006669 ORTHO05D008440 5.1e-32 141.4 129 55.8
Potri.007G052400 Populus trichocarpa HOM05D006669 ORTHO05D008440 5.1e-32 141.4 121 57.0
AT4G37480 Arabidopsis thaliana HOM05D006669 ORTHO05D008440 6.6e-32 141.0 129 55.0
FvH4_1g17190 Fragaria vesca HOM05D006669 ORTHO05D008440 8.7e-32 140.6 121 56.2
FAN19G2999 Fragaria x ananassa HOM05D006669 ORTHO05D008440 8.7e-32 140.6 121 56.2
BolC3t20175H Brassica oleracea HOM05D006669 ORTHO05D008440 1.1e-31 140.2 129 55.8
Carub.0007s0280 Capsella rubella HOM05D006669 ORTHO05D008440 1.1e-31 140.2 129 53.5
Sabra07G0046000 Salix brachista HOM05D006669 ORTHO05D008440 1.1e-31 140.2 121 57.0
BcaB03g12341 Brassica carinata HOM05D006669 ORTHO05D008440 1.5e-31 139.8 129 55.8
A08p22660 Brassica napus HOM05D006669 ORTHO05D008440 1.5e-31 139.8 129 55.8
BraA08t34233Z Brassica rapa HOM05D006669 ORTHO05D008440 1.5e-31 139.8 129 55.8
FAN28G0180 Fragaria x ananassa HOM05D006669 ORTHO05D008440 1.9e-31 139.4 121 55.4
Gohir.A02G153400 Gossypium hirsutum HOM05D006669 ORTHO05D008440 1.9e-31 139.4 129 55.0
CSS0011361 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 2.5e-31 139.0 128 51.6
CSS0012464 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 2.5e-31 139.0 128 51.6
PGR004G0108 Punica granatum HOM05D006669 ORTHO05D008440 7.4e-31 137.5 125 52.0
AL7G13310 Arabidopsis lyrata HOM05D006669 ORTHO05D008440 9.6e-31 137.1 129 52.7
BcaC01g00401 Brassica carinata HOM05D006669 ORTHO05D008440 9.6e-31 137.1 129 55.0
ClCG01G017320 Citrullus lanatus HOM05D006669 ORTHO05D008440 1.3e-30 136.7 120 51.7
AUR62003969 Chenopodium quinoa HOM05D006669 ORTHO05D008440 1.1e-29 133.7 137 48.9
Nn1g04622 Nelumbo nucifera HOM05D006669 ORTHO05D008440 1.1e-29 133.7 117 55.6
Rhsim08G0095700 Rhododendron simsii HOM05D006669 ORTHO05D008440 1.4e-29 133.3 129 51.2
Nitab4.5_0004400g0020 Nicotiana tabacum HOM05D006669 ORTHO05D008440 1.8e-29 132.9 131 54.2
TWI53G1681 Tripterygium wilfordii HOM05D006669 ORTHO05D008440 2.4e-29 132.5 120 56.7
Cpa.g.sc6.52 Carica papaya HOM05D006669 ORTHO05D008440 4.0e-29 131.7 122 54.1
COL.COLO4_11531 Corchorus olitorius HOM05D006669 ORTHO05D008440 4.0e-29 131.7 131 49.6
Nitab4.5_0001772g0050 Nicotiana tabacum HOM05D006669 ORTHO05D008440 6.9e-29 131.0 131 54.2
ATR0030G057 Amborella trichopoda HOM05D006669 ORTHO05D008440 2.0e-28 129.4 119 52.9
Hma1.2p1_1506F.1_g287540 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 2.0e-28 129.4 129 50.4
Sed0019482 Sechium edule HOM05D006669 ORTHO05D008440 2.6e-28 129.0 119 51.3
CAN.G1290.5 Capsicum annuum HOM05D006669 ORTHO05D008440 4.5e-28 128.3 131 53.4
THA.LOC104807621 Tarenaya hassleriana HOM05D006669 ORTHO05D008440 4.5e-28 128.3 126 47.6
CANSAT01G1540 Cannabis sativa HOM05D006669 ORTHO05D008440 9.9e-28 127.1 126 52.4
GSVIVG01000157001 Vitis vinifera HOM05D006669 ORTHO05D008440 9.9e-28 127.1 129 48.1
Peaxi162Scf01526g00017 Petunia axillaris HOM05D006669 ORTHO05D008440 2.2e-27 125.9 122 52.5
Solyc02g064740.3 Solanum lycopersicum HOM05D006669 ORTHO05D008440 4.9e-27 124.8 131 51.9
MELO3C007610.2 Cucumis melo HOM05D006669 ORTHO05D008440 6.4e-27 124.4 121 47.9
Migut.H00372 Erythranthe guttata HOM05D006669 ORTHO05D008440 6.4e-27 124.4 121 50.4
Lsat_1_v5_gn_3_88261 Lactuca sativa HOM05D006669 ORTHO05D008440 6.4e-27 124.4 121 52.1
QL06p039922 Quercus lobata HOM05D006669 ORTHO05D008440 6.4e-27 124.4 118 51.7
Sopen02g014840 Solanum pennellii HOM05D006669 ORTHO05D008440 8.4e-27 124.0 120 52.5
PGSC0003DMG402013020 Solanum tuberosum HOM05D006669 ORTHO05D008440 8.4e-27 124.0 131 51.1
Eucgr.I00723 Eucalyptus grandis HOM05D006669 ORTHO05D008440 1.1e-26 123.6 126 50.8
EL10Ac6g15658 Beta vulgaris HOM05D006669 ORTHO05D008440 1.9e-26 122.9 137 47.4
HanXRQChr12g0376911 Helianthus annuus HOM05D006669 ORTHO05D008440 4.2e-26 121.7 123 50.4
Cc07_g06760 Coffea canephora HOM05D006669 ORTHO05D008440 5.5e-26 121.3 134 47.8
SalBow6G5653 Salvia bowleyana HOM05D006669 ORTHO05D008440 5.5e-26 121.3 131 47.3
Aa31LG6G14350 Aethionema arabicum HOM05D006669 ORTHO05D008440 2.7e-25 119.0 128 48.4
ECA246G2447 Erigeron canadensis HOM05D006669 ORTHO05D008440 3.5e-25 118.6 119 51.3
CsaV3_6G043850 Cucumis sativus L. HOM05D006669 ORTHO05D008440 4.6e-25 118.2 118 47.5
AUR62040277 Chenopodium quinoa HOM05D006669 ORTHO05D008440 5.1e-24 114.8 126 48.4
Thecc.01G068300 Theobroma cacao HOM05D006669 ORTHO05D008440 6.7e-24 114.4 120 48.3
Os03g0761700 Oryza sativa ssp. japonica HOM05D006669 ORTHO05D008440 9.6e-23 110.5 120 51.7
SGA_v2.0_scaffold15G07411 Striga asiatica HOM05D006669 ORTHO05D008440 4.8e-22 108.2 146 44.5
DCAR_025954 Daucus carota HOM05D006669 ORTHO05D008440 6.2e-22 107.8 124 46.8
HPP92_000758 Vanilla planifolia HOM05D006669 ORTHO05D008440 6.2e-22 107.8 125 46.4
SEGI_27298 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 2.6e-20 102.4 134 40.3
Sc16g0000050 Simmondsia chinensis HOM05D006669 ORTHO05D008440 7.6e-20 100.9 120 45.0
Zm00001eb214300 Zea mays HOM05D006669 ORTHO05D008440 7.6e-20 100.9 120 48.3
unitig_62.g23421 Utricularia gibba HOM05D006669 ORTHO05D008440 3.8e-19 98.6 120 47.5
MSTRG.2837 Avicennia marina HOM05D006669 ORTHO05D008440 1.9e-18 96.3 110 47.3
Pp3c5_10140 Physcomitrium patens HOM05D006669 ORTHO05D008440 1.4e-10 70.1 122 38.5
AagrBONN_evm.TU.Sc2ySwM_228.5150 Anthoceros agrestis HOM05D006669 ORTHO05D008440 7.2e-10 67.8 116 37.9
Hma1.2p1_1506F.1_g287530 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 9.3e-10 67.4 68 48.5
Mapoly0045s0047 Marchantia polymorpha HOM05D006669 ORTHO05D008440 1.2e-09 67.0 125 36.0
vmacro17989 Vaccinium macrocarpon HOM05D006669 ORTHO05D008440 1.6e-09 66.6 129 37.2


User provided reference genes

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