Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G626 Trifolium pratense HOM05D002090 ORTHO05D001923 1.0e-179 633.3 314 100.0
TPR.G37532 Trifolium pratense HOM05D002090 ORTHO05D001923 4.4e-66 255.8 305 44.6
TPR.G21912 Trifolium pratense HOM05D000096 ORTHO05D000045 7.8e-63 245.0 284 43.0
TPR.G39946 Trifolium pratense HOM05D002090 ORTHO05D001923 3.0e-54 216.5 198 50.5
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 5.1e-46 189.1 250 39.6
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 1.0e-41 174.9 307 36.2
Medtr5g041170 Medicago truncatula HOM05D002090 ORTHO05D001923 2.9e-41 173.3 247 39.3
Medtr0003s0290 Medicago truncatula HOM05D002090 ORTHO05D001923 1.1e-35 154.8 292 32.5
Medtr7g450880 Medicago truncatula HOM05D002090 ORTHO05D001923 2.5e-32 143.7 205 38.5
TPR.G19292 Trifolium pratense HOM05D002090 ORTHO05D001923 5.5e-32 142.5 292 36.3
TPR.G17441 Trifolium pratense HOM05D002090 ORTHO05D001923 7.9e-31 138.7 139 46.0
TPR.G27405 Trifolium pratense HOM05D002090 ORTHO05D001923 1.1e-29 134.8 295 32.5
Psat1g003680 Pisum sativum HOM05D002090 ORTHO05D001923 9.7e-29 131.7 151 37.7
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 8.2e-28 128.6 210 34.3
TPR.G7353 Trifolium pratense HOM05D002090 ORTHO05D001923 1.2e-26 124.8 219 33.3
Psat1g020520 Pisum sativum HOM05D012348 ORTHO05D012889 2.0e-26 124.0 137 38.7
TPR.G13259 Trifolium pratense HOM05D002090 ORTHO05D001923 5.9e-26 122.5 252 32.1
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 1.3e-25 121.3 288 29.5
Medtr3g055660 Medicago truncatula HOM05D002090 ORTHO05D001923 8.5e-25 118.6 279 28.3
Medtr5g053590 Medicago truncatula HOM05D002090 ORTHO05D001923 1.1e-24 118.2 291 30.9
Medtr1g043690 Medicago truncatula HOM05D002090 ORTHO05D001923 2.7e-23 113.6 354 28.5
Lalb_Chr02g0157091 Lupinus albus HOM05D002090 ORTHO05D001923 6.1e-23 112.5 188 33.5
TPR.G35804 Trifolium pratense HOM05D002090 ORTHO05D001923 1.0e-22 111.7 138 46.4
TPR.G15924 Trifolium pratense HOM05D000096 ORTHO05D000045 3.0e-22 110.2 193 31.1
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 2.0e-21 107.5 314 25.8
Medtr4g014890 Medicago truncatula HOM05D002090 ORTHO05D001923 3.3e-21 106.7 279 26.9
Lj3g0021994 Lotus japonicus HOM05D002090 ORTHO05D001923 7.4e-21 105.5 299 33.1
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 1.1e-19 101.7 226 31.0
Glyma.09G126850 Glycine max HOM05D002090 ORTHO05D001923 1.8e-19 100.9 179 35.2
TPR.G17007 Trifolium pratense HOM05D002090 ORTHO05D001923 1.8e-19 100.9 86 50.0
Medtr6g059860 Medicago truncatula HOM05D002090 ORTHO05D001923 2.4e-19 100.5 279 26.2
Medtr1g062890 Medicago truncatula HOM05D002090 ORTHO05D001923 3.4e-18 96.7 183 29.5
Medtr4g085760 Medicago truncatula HOM05D002090 ORTHO05D001923 5.0e-17 92.8 251 25.5
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 1.4e-16 91.3 250 28.0
Glyma.11G178600 Glycine max HOM05D002090 ORTHO05D001923 1.4e-16 91.3 267 24.3
Lalb_Chr06g0171231 Lupinus albus HOM05D002090 ORTHO05D001923 1.4e-16 91.3 138 33.3
Glyma.17G216450 Glycine max HOM05D002090 ORTHO05D001923 1.9e-16 90.9 188 27.7
Glyma.06G126350 Glycine max HOM05D002090 ORTHO05D001923 4.2e-16 89.7 185 31.4
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 5.5e-16 89.4 175 28.0
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 5.5e-16 89.4 219 25.6
Glyma.15G235800 Glycine max HOM05D002090 ORTHO05D001923 9.4e-16 88.6 244 26.2
Psat1g120640 Pisum sativum HOM05D002090 ORTHO05D015180 1.2e-15 88.2 183 26.8
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 2.7e-15 87.0 267 24.0
Glyma.04G181700 Glycine max HOM05D002090 ORTHO05D001923 4.7e-15 86.3 267 23.6
TPR.G25717 Trifolium pratense HOM05D002090 ORTHO05D001923 2.3e-14 84.0 268 29.1
Psat5g067440 Pisum sativum HOM05D002090 ORTHO05D001923 3.0e-14 83.6 107 33.6
Glyma.08G253400 Glycine max HOM05D002090 ORTHO05D001923 6.7e-14 82.4 234 25.2
Lalb_Chr05g0225681 Lupinus albus HOM05D002090 ORTHO05D001923 8.8e-14 82.0 129 31.8
TPR.G7359 Trifolium pratense HOM05D002090 ORTHO05D001923 1.1e-13 81.6 73 52.1
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 2.0e-13 80.9 188 27.7
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 2.0e-13 80.9 186 26.3
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 2.6e-13 80.5 282 26.2
Medtr8g469790 Medicago truncatula HOM05D000014 ORTHO05D000016 3.3e-13 80.1 152 27.6
Glyma.18G142200 Glycine max HOM05D002090 ORTHO05D001923 4.4e-13 79.7 276 23.9
Psat5g186520 Pisum sativum HOM05D002090 ORTHO05D001923 4.4e-13 79.7 102 36.3
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 7.4e-13 79.0 211 26.1
Glyma.13G025000 Glycine max HOM05D002090 ORTHO05D001923 9.7e-13 78.6 188 25.0
Lj4g0014236 Lotus japonicus HOM05D002090 ORTHO05D020767 9.7e-13 78.6 183 36.1
Glyma.20G065700 Glycine max HOM05D002090 ORTHO05D001923 2.2e-12 77.4 184 25.0
Medtr6g055250 Medicago truncatula HOM05D002090 ORTHO05D001923 2.2e-12 77.4 146 34.2
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 2.8e-12 77.0 146 30.1
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 4.8e-12 76.3 181 26.0
Glyma.05G078700 Glycine max HOM05D002090 ORTHO05D001923 1.1e-11 75.1 163 27.6
Glyma.13G028600 Glycine max HOM05D002090 ORTHO05D001923 1.1e-11 75.1 240 25.0
Glyma.02G161500 Glycine max HOM05D002090 ORTHO05D001923 1.8e-11 74.3 244 23.4
TPR.G10894 Trifolium pratense HOM05D002090 ORTHO05D001923 3.1e-11 73.6 153 31.4
Psat5g183760 Pisum sativum HOM05D015378 ORTHO05D015180 5.3e-11 72.8 218 24.8
Psat2g112720 Pisum sativum HOM05D002090 ORTHO05D001923 9.1e-11 72.0 193 28.0
Lalb_Chr11g0072781 Lupinus albus HOM05D002090 ORTHO05D001923 1.6e-10 71.2 197 27.9
Glyma.16G114500 Glycine max HOM05D002090 ORTHO05D001923 2.6e-10 70.5 112 28.6
TPR.G39328 Trifolium pratense HOM05D002090 ORTHO05D001923 2.6e-10 70.5 89 37.1
Glyma.16G116932 Glycine max HOM05D002090 ORTHO05D001923 3.5e-10 70.1 159 25.8
Lalb_Chr13g0293791 Lupinus albus HOM05D002090 ORTHO05D001923 3.5e-10 70.1 94 31.9
TPR.G8108 Trifolium pratense HOM05D000096 ORTHO05D000045 2.2e-09 67.4 209 26.3
Psat1g008280 Pisum sativum HOM05D002090 ORTHO05D001923 1.5e-08 64.7 92 32.6
Lj4g0003601 Lotus japonicus HOM05D000353 ORTHO05D000174 1.9e-08 64.3 178 27.0
Psat2g105560 Pisum sativum HOM05D039230 ORTHO05D001923 3.2e-08 63.5 162 23.5
TPR.G27142 Trifolium pratense HOM05D002090 ORTHO05D001923 3.2e-08 63.5 93 34.4
TPR.G21791 Trifolium pratense HOM05D002090 ORTHO05D411670 4.2e-08 63.2 87 44.8
Psat7g184560 Pisum sativum HOM05D002090 ORTHO05D001923 7.2e-08 62.4 73 35.6
Glyma.13G075500 Glycine max HOM05D002090 ORTHO05D001923 9.4e-08 62.0 282 23.8
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 61.6 284 25.7
ECA233G5850 Erigeron canadensis HOM05D003964 ORTHO05D002376 2.1e-07 60.8 181 26.5
TPR.G26860 Trifolium pratense HOM05D002090 ORTHO05D001923 2.1e-07 60.8 91 30.8
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 2.7e-07 60.5 296 22.6
Glyma.03G056600 Glycine max HOM05D002090 ORTHO05D001923 3.6e-07 60.1 119 30.3
Glyma.05G084800 Glycine max HOM05D002090 ORTHO05D001923 4.7e-07 59.7 107 28.0
Medtr8g077280 Medicago truncatula HOM05D032691 ORTHO05D001923 6.1e-07 59.3 119 31.1
ECA236G2182 Erigeron canadensis HOM05D000353 ORTHO05D000174 8.0e-07 58.9 181 26.0
Glyma.09G107433 Glycine max HOM05D002090 ORTHO05D014779 8.0e-07 58.9 79 39.2
ECA246G2956 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.8e-06 57.8 180 26.1
Glyma.20G069000 Glycine max HOM05D017635 ORTHO05D014779 1.8e-06 57.8 200 23.5
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 1.8e-06 57.8 145 28.3
Psat1g188080 Pisum sativum HOM05D002090 ORTHO05D001923 1.8e-06 57.8 170 28.2
Psat6g105800 Pisum sativum HOM05D002090 ORTHO05D001923 1.8e-06 57.8 129 25.6
ECA232G1523 Erigeron canadensis HOM05D000353 ORTHO05D000174 3.0e-06 57.0 153 24.8
ECA240G4108 Erigeron canadensis HOM05D003964 ORTHO05D002376 4.0e-06 56.6 236 23.7
TPR.G150 Trifolium pratense HOM05D002090 ORTHO05D026072 4.0e-06 56.6 64 35.9
ECA240G1473 Erigeron canadensis HOM05D000353 ORTHO05D000174 5.2e-06 56.2 181 25.4
Glyma.15G243900 Glycine max HOM05D002090 ORTHO05D001923 8.8e-06 55.5 104 27.9


User provided reference genes

Program Settings