Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G623 Trifolium pratense HOM05D000808 ORTHO05D000863 8.3e-21 102.8 54 100.0
TPR.G25242 Trifolium pratense HOM05D000808 ORTHO05D000863 5.4e-20 100.1 54 98.1
TPR.G13615 Trifolium pratense HOM05D000808 ORTHO05D000863 1.2e-19 99.0 54 94.4
Medtr2g008590 Medicago truncatula HOM05D000808 ORTHO05D000863 6.6e-18 93.2 54 88.9
Ca_00126_v3 Cicer arietinum L. HOM05D000808 ORTHO05D000863 1.9e-17 91.7 54 85.2
Lj6g0023358 Lotus japonicus HOM05D000808 ORTHO05D000863 4.0e-15 84.0 51 78.4
PGR142G0261 Punica granatum HOM05D000808 ORTHO05D000863 4.0e-15 84.0 51 82.4
Phvul.006G207400 Phaseolus vulgaris HOM05D000808 ORTHO05D000863 1.5e-14 82.0 51 80.4
Glyma.15G052300 Glycine max HOM05D000808 ORTHO05D000863 3.4e-14 80.9 51 78.4
Dinv24207 Davidia involucrata HOM05D000808 ORTHO05D000863 4.4e-14 80.5 51 74.5
CDE10G0864 Ceratophyllum demersum HOM05D038533 ORTHO05D043860 9.8e-14 79.3 51 76.5
Hma1.2p1_0217F.1_g091840 Hydrangea macrophylla HOM05D000808 ORTHO05D000863 9.8e-14 79.3 51 74.5
VMungo0540G0817 Vigna mungo HOM05D000808 ORTHO05D000863 1.7e-13 78.6 51 78.4
Sopen01g047550 Solanum pennellii HOM05D000808 ORTHO05D000863 2.2e-13 78.2 51 76.5
PGSC0003DMG400012566 Solanum tuberosum HOM05D000808 ORTHO05D000863 2.2e-13 78.2 51 76.5
CSS0036795 Camellia sinensis var. sinensis HOM05D000808 ORTHO05D000863 4.9e-13 77.0 51 70.6
RcHm_v2.0_Chr7g0226241 Rosa chinensis HOM05D000808 ORTHO05D000863 6.3e-13 76.6 51 74.5
Solyc01g105020.3 Solanum lycopersicum HOM05D000808 ORTHO05D000863 6.3e-13 76.6 51 74.5
CiPaw.05G038000 Carya illinoinensis HOM05D000808 ORTHO05D000863 8.3e-13 76.3 51 76.5
Duzib132G0787 Durio zibethinus HOM05D000808 ORTHO05D000863 8.3e-13 76.3 51 72.5
MD08G1221000 Malus domestica HOM05D000808 ORTHO05D000863 8.3e-13 76.3 51 70.6
MD15G1411700 Malus domestica HOM05D000808 ORTHO05D000863 8.3e-13 76.3 51 70.6
GSVIVG01029794001 Vitis vinifera HOM05D000808 ORTHO05D000863 8.3e-13 76.3 51 74.5
arahy.Tifrunner.gnm1.ann1.J1JTDU Arachis hypogaea HOM05D000808 ORTHO05D000863 1.1e-12 75.9 51 74.5
Eucgr.I02678 Eucalyptus grandis HOM05D000808 ORTHO05D000863 1.1e-12 75.9 51 70.6
Nitab4.5_0002865g0010 Nicotiana tabacum HOM05D000808 ORTHO05D000863 1.4e-12 75.5 51 72.5
QL11p019837 Quercus lobata HOM05D000808 ORTHO05D000863 1.4e-12 75.5 51 72.5
Thecc.02G142000 Theobroma cacao HOM05D000808 ORTHO05D000863 1.4e-12 75.5 51 72.5
Lalb_Chr15g0090481 Lupinus albus HOM05D000808 ORTHO05D000863 1.8e-12 75.1 51 72.5
Nn5g29039 Nelumbo nucifera HOM05D000808 ORTHO05D000863 1.8e-12 75.1 50 74.0
Oeu007950.1 Olea europaea HOM05D000808 ORTHO05D000863 1.8e-12 75.1 51 70.6
Ah.09g232030 Amaranthus hybridus HOM05D004183 ORTHO05D005022 2.4e-12 74.7 51 68.6
Nitab4.5_0003434g0060 Nicotiana tabacum HOM05D000808 ORTHO05D000863 2.4e-12 74.7 51 70.6
arahy.Tifrunner.gnm1.ann1.PSG2M4 Arachis hypogaea HOM05D000808 ORTHO05D000863 3.2e-12 74.3 50 74.0
Lj9A320T32 Lonicera japonica HOM05D000808 ORTHO05D000863 3.2e-12 74.3 51 72.5
Lju1163A0G50 Lonicera japonica HOM05D000808 ORTHO05D000863 3.2e-12 74.3 51 72.5
Atru.chr6.1128 Acer truncatum HOM05D000808 ORTHO05D000863 4.1e-12 73.9 51 70.6
Peaxi162Scf00001g00027 Petunia axillaris HOM05D000808 ORTHO05D000863 4.1e-12 73.9 51 74.5
Prupe.1G557900 Prunus persica HOM05D000808 ORTHO05D000863 4.1e-12 73.9 51 70.6
TWI14G0065 Tripterygium wilfordii HOM05D000808 ORTHO05D000863 4.1e-12 73.9 51 72.5
TWI14G0486 Tripterygium wilfordii HOM05D000808 ORTHO05D000863 4.1e-12 73.9 51 72.5
Rhsim10G0057000 Rhododendron simsii HOM05D000808 ORTHO05D000863 5.4e-12 73.6 51 70.6
vmacro19922 Vaccinium macrocarpon HOM05D000808 ORTHO05D000863 9.2e-12 72.8 51 68.6
FvH4_5g30930 Fragaria vesca HOM05D000808 ORTHO05D000863 1.2e-11 72.4 50 72.0
HanXRQChr10g0292641 Helianthus annuus HOM05D000808 ORTHO05D000863 1.2e-11 72.4 51 70.6
MBI02_g30887_MAGBIO Magnolia biondii HOM05D000808 ORTHO05D000863 1.2e-11 72.4 51 66.7
CAN.G523.88 Capsicum annuum HOM05D000808 ORTHO05D000863 1.6e-11 72.0 51 70.6
FAN04G0791 Fragaria x ananassa HOM05D000808 ORTHO05D000863 1.6e-11 72.0 50 72.0
FAN08G0934 Fragaria x ananassa HOM05D000808 ORTHO05D000863 1.6e-11 72.0 50 72.0
FAN18G1470 Fragaria x ananassa HOM05D000808 ORTHO05D000863 1.6e-11 72.0 50 72.0
Oeu026169.4 Olea europaea HOM05D000808 ORTHO05D000863 1.6e-11 72.0 51 66.7
Actinidia28062 Actinidia chinensis HOM05D000808 ORTHO05D000863 2.0e-11 71.6 51 66.7
Haze_10640 Corylus avellana HOM05D000808 ORTHO05D000863 2.7e-11 71.2 48 72.9
PSO541G5282 Papaver somniferum HOM05D000808 ORTHO05D000863 2.7e-11 71.2 51 66.7
TAR376G0857 Trochodendron aralioides HOM05D000808 ORTHO05D000863 2.7e-11 71.2 49 73.5
EL10Ac8g19350 Beta vulgaris HOM05D000808 ORTHO05D000863 3.5e-11 70.9 51 64.7
COL.COLO4_05751 Corchorus olitorius HOM05D000808 ORTHO05D000863 3.5e-11 70.9 50 72.0
SalBow5G5523 Salvia bowleyana HOM05D000808 ORTHO05D000863 3.5e-11 70.9 51 66.7
ECA234G0410 Erigeron canadensis HOM05D000808 ORTHO05D000863 4.5e-11 70.5 51 68.6
FAN13G1745 Fragaria x ananassa HOM05D000808 ORTHO05D000863 5.9e-11 70.1 50 70.0
Lsat_1_v5_gn_5_106961 Lactuca sativa HOM05D000808 ORTHO05D000863 5.9e-11 70.1 51 64.7
Os03g0192500 Oryza sativa ssp. japonica HOM05D000808 ORTHO05D000863 5.9e-11 70.1 51 62.7
Cpa.g.sc793.1 Carica papaya HOM05D000808 ORTHO05D000863 7.8e-11 69.7 45 77.8
AUR62027374 Chenopodium quinoa HOM05D000808 ORTHO05D000863 7.8e-11 69.7 50 68.0
Manes.14G167000 Manihot esculenta HOM05D000808 ORTHO05D000863 7.8e-11 69.7 47 72.3
Psat1g216960 Pisum sativum HOM05D000808 ORTHO05D000863 7.8e-11 69.7 47 74.5
Rhsim10G0056600 Rhododendron simsii HOM05D000808 ORTHO05D000863 7.8e-11 69.7 52 71.2
Aqoxy6G00573 Aquilegia oxysepala HOM05D000808 ORTHO05D000863 1.0e-10 69.3 51 64.7
HPP92_009237 Vanilla planifolia HOM05D000808 ORTHO05D000863 1.0e-10 69.3 53 64.2
AUR62031291 Chenopodium quinoa HOM05D000808 ORTHO05D000863 1.3e-10 68.9 51 64.7
DCAR_021848 Daucus carota HOM05D000808 ORTHO05D000863 2.9e-10 67.8 51 64.7
Sp7g31240 Schrenkiella parvula HOM05D000808 ORTHO05D000863 8.6e-10 66.2 50 64.0
Zm00001eb223950 Zea mays HOM05D000808 ORTHO05D000863 8.6e-10 66.2 51 58.8
CANSAT11G0349 Cannabis sativa HOM05D000808 ORTHO05D000863 1.5e-09 65.5 50 64.0
SGA_v2.0_scaffold83G26285 Striga asiatica HOM05D000808 ORTHO05D000863 1.5e-09 65.5 51 62.7
Gorai.005G218800 Gossypium raimondii HOM05D000808 ORTHO05D000863 2.5e-09 64.7 45 71.1
A01p04760 Brassica napus HOM05D000808 ORTHO05D000863 3.3e-09 64.3 50 62.0
BraA01t00459Z Brassica rapa HOM05D000808 ORTHO05D000863 3.3e-09 64.3 50 62.0
Zm00001eb401240 Zea mays HOM05D000808 ORTHO05D000863 3.3e-09 64.3 51 56.9
SEGI_25525 Sequoiadendron giganteum HOM05D000808 ORTHO05D000863 4.3e-09 63.9 51 64.7
Os10g0370000 Oryza sativa ssp. japonica HOM05D000808 ORTHO05D000863 5.6e-09 63.5 51 54.9
THA.LOC104807162 Tarenaya hassleriana HOM05D000808 ORTHO05D000863 7.3e-09 63.2 50 64.0
BcaC09g52167 Brassica carinata HOM05D000808 ORTHO05D000863 9.5e-09 62.8 50 60.0
AL7G18040 Arabidopsis lyrata HOM05D000808 ORTHO05D000863 1.6e-08 62.0 51 58.8
AT4G33500 Arabidopsis thaliana HOM05D000808 ORTHO05D000863 1.6e-08 62.0 51 56.9
C01p05170 Brassica napus HOM05D000808 ORTHO05D000863 1.6e-08 62.0 50 60.0
BolC1t00497H Brassica oleracea HOM05D000808 ORTHO05D000863 1.6e-08 62.0 50 60.0
Migut.B00626 Erythranthe guttata HOM05D000808 ORTHO05D000863 1.6e-08 62.0 50 60.0
ATR0564G392 Amborella trichopoda HOM05D000808 ORTHO05D000863 2.1e-08 61.6 43 69.8
Carub.0007s0696 Capsella rubella HOM05D000808 ORTHO05D000863 3.6e-08 60.8 50 58.0
Cc02_g21730 Coffea canephora HOM05D000808 ORTHO05D000863 1.4e-07 58.9 50 64.0
unitig_8.g3474 Utricularia gibba HOM05D000808 ORTHO05D000863 2.3e-07 58.2 51 56.9
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 4.0e-07 57.4 40 67.5
Rhsim10G0056800 Rhododendron simsii HOM05D000808 ORTHO05D000863 4.0e-07 57.4 51 58.8
Thhalv10024559m.g Eutrema salsugineum HOM05D000808 ORTHO05D000863 1.2e-06 55.8 50 54.0
Aa31sc568G20 Aethionema arabicum HOM05D000808 ORTHO05D000863 4.4e-06 53.9 46 54.3
Gohir.A03G172600 Gossypium hirsutum HOM05D000808 ORTHO05D000863 4.4e-06 53.9 39 66.7
Gohir.D02G195800 Gossypium hirsutum HOM05D000808 ORTHO05D000863 4.4e-06 53.9 39 66.7
Sc18g0004010 Simmondsia chinensis HOM05D000808 ORTHO05D000863 5.8e-06 53.5 50 56.0


User provided reference genes

Program Settings