Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 5.5e-96 354.4 189 100.0
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 3.8e-73 278.5 196 80.1
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.9e-64 249.6 189 74.1
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 4.1e-51 205.3 196 61.2
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.4e-43 180.3 103 89.3
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.4e-43 179.5 135 67.4
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 7.1e-43 177.9 143 68.5
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 9.2e-43 177.6 192 54.7
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.6e-42 176.8 191 57.1
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 3.5e-42 175.6 193 56.0
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 8.7e-41 171.0 165 58.2
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 8.7e-41 171.0 195 52.8
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.5e-40 170.2 193 53.9
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.9e-40 169.9 195 52.3
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 2.5e-40 169.5 107 77.6
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 2.5e-40 169.5 108 76.9
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 4.3e-40 168.7 191 56.0
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 9.6e-40 167.5 186 52.7
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 9.6e-40 167.5 106 80.2
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 1.2e-39 167.2 158 58.9
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.6e-39 166.8 163 58.3
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 1.6e-39 166.8 172 55.2
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 3.6e-39 165.6 207 47.8
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 4.7e-39 165.2 164 56.1
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 8.1e-39 164.5 175 56.0
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 1.8e-38 163.3 182 50.0
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 1.8e-38 163.3 112 71.4
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.8e-38 163.3 180 52.8
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 3.1e-38 162.5 112 72.3
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 4.0e-38 162.2 110 70.9
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.2e-37 160.6 191 52.4
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.0e-37 159.8 106 73.6
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.6e-37 159.5 113 68.1
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 3.4e-37 159.1 188 51.6
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 3.4e-37 159.1 130 63.1
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 4.4e-37 158.7 170 53.5
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 5.8e-37 158.3 122 60.7
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 9.9e-37 157.5 190 48.4
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.3e-36 157.1 187 49.2
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.3e-36 157.1 106 67.0
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.2e-36 156.4 179 51.4
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.2e-36 156.4 105 76.2
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 2.2e-36 156.4 190 50.5
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 2.9e-36 156.0 182 56.0
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 2.9e-36 156.0 173 50.3
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.8e-36 155.6 179 50.8
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 3.8e-36 155.6 163 57.1
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 3.8e-36 155.6 163 52.8
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 4.9e-36 155.2 108 73.1
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.9e-36 155.2 163 57.1
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 4.9e-36 155.2 110 72.7
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 6.4e-36 154.8 110 69.1
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 8.4e-36 154.5 153 56.9
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.4e-35 153.7 124 63.7
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.4e-35 153.7 127 62.2
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.9e-35 153.3 132 58.3
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.9e-35 153.3 110 67.3
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.4e-35 152.9 179 49.2
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 4.2e-35 152.1 109 68.8
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.2e-35 152.1 201 50.2
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.2e-35 152.1 201 50.2
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 5.4e-35 151.8 112 65.2
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 7.1e-35 151.4 187 47.1
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 7.1e-35 151.4 200 44.5
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 9.3e-35 151.0 107 69.2
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 9.3e-35 151.0 154 55.8
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 9.3e-35 151.0 105 70.5
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.6e-34 150.2 163 55.2
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.6e-34 150.2 163 55.2
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 2.1e-34 149.8 199 48.7
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.7e-34 149.4 174 50.0
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 7.8e-34 147.9 182 48.4
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 7.8e-34 147.9 179 48.6
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.0e-33 147.5 174 49.4
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.0e-33 147.5 110 70.0
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.7e-33 146.7 158 51.3
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.7e-33 146.7 125 60.8
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.7e-33 146.7 125 60.8
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 1.7e-33 146.7 180 48.9
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 3.0e-33 146.0 189 47.6
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.1e-32 144.1 114 65.8
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 2.5e-32 142.9 95 71.6
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 4.3e-32 142.1 91 74.7
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 5.6e-32 141.7 172 47.1
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.4e-30 137.1 111 65.8
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 6.9e-30 134.8 172 45.9
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 2.0e-29 133.3 93 68.8
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 2.6e-29 132.9 93 66.7
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 7.6e-29 131.3 180 45.6
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.7e-28 130.2 188 48.4
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.0e-25 120.9 102 58.8
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.8e-25 120.2 102 59.8
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 3.9e-25 119.0 118 50.0
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 3.3e-24 115.9 72 77.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 5.6e-24 115.2 131 48.9
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 3.1e-22 109.4 111 50.5
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 3.1e-22 109.4 92 51.1
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 3.4e-21 105.9 75 68.0
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 4.5e-21 105.5 99 55.6
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.3e-20 104.0 110 46.4
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 6.4e-20 101.7 85 58.8
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 2.7e-18 96.3 61 70.5
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 8.7e-17 91.3 93 48.4
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 5.3e-14 82.0 190 36.3
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 7.9e-10 68.2 43 74.4
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 2.3e-09 66.6 66 56.1
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 6.3e-07 58.5 93 37.6


User provided reference genes

Program Settings