Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 2.5e-167 592.0 299 100.0
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 3.6e-126 455.3 235 96.6
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 9.0e-125 450.7 236 92.8
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 3.5e-121 438.7 237 92.0
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 6.6e-120 434.5 238 90.3
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 7.3e-119 431.0 242 87.6
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 3.6e-118 428.7 242 88.4
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 1.5e-116 423.3 230 89.6
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 2.6e-116 422.5 231 88.7
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 2.6e-116 422.5 238 87.4
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 9.9e-116 420.6 239 85.8
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 2.2e-115 419.5 233 88.0
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 2.4e-114 416.0 232 86.6
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 7.1e-114 414.5 229 88.2
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 7.1e-114 414.5 234 86.3
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 1.2e-113 413.7 235 85.5
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 2.7e-113 412.5 238 85.3
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.7e-113 412.5 239 85.4
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 1.0e-112 410.6 243 83.5
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.3e-112 409.5 224 89.3
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 3.0e-112 409.1 241 84.6
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 3.0e-112 409.1 241 84.6
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 3.9e-112 408.7 239 85.8
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 6.7e-112 407.9 236 86.9
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 6.7e-112 407.9 237 84.4
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.5e-111 406.0 227 86.8
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 2.5e-111 406.0 239 84.1
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 2.5e-111 406.0 232 85.8
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 4.3e-111 405.2 230 87.0
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.3e-110 403.7 277 74.7
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 2.8e-110 402.5 235 84.7
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.8e-110 402.5 239 83.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 1.4e-109 400.2 235 82.6
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 1.4e-109 400.2 226 85.0
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 3.1e-109 399.1 235 84.3
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 6.9e-109 397.9 237 81.9
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 9.0e-109 397.5 236 83.1
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 9.0e-109 397.5 231 85.3
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.5e-108 396.7 237 83.1
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 1.5e-108 396.7 233 83.7
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.0e-108 396.4 245 81.6
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 2.0e-108 396.4 226 85.4
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 2.6e-108 396.0 228 84.2
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 9.9e-108 394.0 240 82.5
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 3.8e-107 392.1 231 83.1
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 3.8e-107 392.1 235 80.9
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 8.4e-107 391.0 235 80.4
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 2.4e-106 389.4 235 80.0
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 7.1e-106 387.9 226 84.5
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 9.3e-106 387.5 239 78.2
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 9.3e-106 387.5 239 78.2
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.2e-105 387.1 223 86.5
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.3e-104 383.6 241 80.1
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.0e-104 382.5 239 79.5
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.1e-103 380.6 222 83.3
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 2.5e-103 379.4 233 79.0
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 4.3e-103 378.6 229 80.3
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 9.6e-103 377.5 251 76.5
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 1.3e-102 377.1 239 80.8
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.3e-102 377.1 232 82.3
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.1e-101 374.0 231 82.7
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.1e-101 374.0 231 82.7
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 6.9e-101 371.3 229 81.7
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 1.5e-100 370.2 206 90.3
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.7e-99 366.7 232 79.7
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.4e-99 364.4 232 79.3
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.5e-95 353.6 235 74.0
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 4.3e-95 352.1 249 72.7
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 4.3e-95 352.1 235 75.7
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 3.7e-94 349.0 236 74.2
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.8e-93 346.7 227 72.2
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 1.5e-92 343.6 236 71.6
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 3.4e-92 342.4 237 71.7
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 3.4e-92 342.4 227 70.5
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 2.5e-90 336.3 200 82.0
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 3.2e-90 335.9 225 75.6
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 4.2e-90 335.5 238 71.0
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.0e-88 329.3 232 74.1
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 3.0e-88 329.3 249 68.7
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.3e-87 325.9 200 79.5
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 3.3e-87 325.9 249 69.1
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 3.4e-84 315.8 174 86.8
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 2.7e-81 306.2 194 78.4
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 2.7e-81 306.2 228 67.5
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.1e-77 292.7 251 64.5
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 3.5e-76 289.3 224 68.8
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.3e-67 260.8 264 54.2
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.0e-64 251.1 142 83.8
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 2.4e-61 240.0 140 85.0
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.4e-61 240.0 156 78.2
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 3.5e-60 236.1 220 51.8
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 2.2e-59 233.4 152 76.3
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 2.7e-57 226.5 242 52.9
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 3.6e-57 226.1 220 52.3
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 8.3e-30 135.2 82 76.8
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.5e-26 123.6 223 35.9
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 3.6e-17 93.2 118 50.0
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.0e-11 75.1 57 63.2
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 8.4e-06 55.5 46 67.4


User provided reference genes

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